Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06685 and BWI76_RS06690 are separated by 243 nucleotides BWI76_RS06690 and BWI76_RS06695 are separated by 353 nucleotides
BWI76_RS06685: BWI76_RS06685 - cyclic diguanylate phosphodiesterase (EAL) domain-containing protein, at 1,400,525 to 1,402,111
_RS06685
BWI76_RS06690: BWI76_RS06690 - ABC transporter ATP-binding protein, at 1,402,355 to 1,403,464
_RS06690
BWI76_RS06695: BWI76_RS06695 - ABC transporter substrate-binding protein, at 1,403,818 to 1,405,050
_RS06695
Position (kb)
1402
1403
1404 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1401.459 kb on + strand, within BWI76_RS06685 at 1401.482 kb on + strand, within BWI76_RS06685 at 1401.482 kb on + strand, within BWI76_RS06685 at 1401.496 kb on - strand, within BWI76_RS06685 at 1401.544 kb on + strand, within BWI76_RS06685 at 1401.772 kb on - strand, within BWI76_RS06685 at 1401.784 kb on + strand, within BWI76_RS06685 at 1401.784 kb on + strand, within BWI76_RS06685 at 1401.860 kb on + strand, within BWI76_RS06685 at 1401.986 kb on + strand at 1401.996 kb on + strand at 1402.004 kb on - strand at 1402.144 kb on - strand at 1402.154 kb on - strand at 1402.187 kb on - strand at 1402.250 kb on + strand at 1402.290 kb on - strand at 1402.383 kb on + strand at 1402.514 kb on - strand, within BWI76_RS06690 at 1402.514 kb on - strand, within BWI76_RS06690 at 1402.519 kb on - strand, within BWI76_RS06690 at 1402.683 kb on - strand, within BWI76_RS06690 at 1402.706 kb on - strand, within BWI76_RS06690 at 1402.883 kb on - strand, within BWI76_RS06690 at 1402.896 kb on + strand, within BWI76_RS06690 at 1402.982 kb on - strand, within BWI76_RS06690 at 1403.053 kb on + strand, within BWI76_RS06690 at 1403.058 kb on + strand, within BWI76_RS06690 at 1403.152 kb on - strand, within BWI76_RS06690 at 1403.209 kb on + strand, within BWI76_RS06690 at 1403.284 kb on + strand, within BWI76_RS06690 at 1403.295 kb on - strand, within BWI76_RS06690 at 1403.394 kb on + strand at 1403.424 kb on - strand at 1403.978 kb on + strand, within BWI76_RS06695 at 1404.203 kb on - strand, within BWI76_RS06695 at 1404.323 kb on - strand, within BWI76_RS06695 at 1404.386 kb on + strand, within BWI76_RS06695 at 1404.436 kb on + strand, within BWI76_RS06695
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 1,401,459 + BWI76_RS06685 0.59 +0.8 1,401,482 + BWI76_RS06685 0.60 -1.2 1,401,482 + BWI76_RS06685 0.60 -0.7 1,401,496 - BWI76_RS06685 0.61 +2.1 1,401,544 + BWI76_RS06685 0.64 -0.7 1,401,772 - BWI76_RS06685 0.79 +0.1 1,401,784 + BWI76_RS06685 0.79 +0.1 1,401,784 + BWI76_RS06685 0.79 -0.1 1,401,860 + BWI76_RS06685 0.84 -0.3 1,401,986 + -1.4 1,401,996 + -0.8 1,402,004 - -0.6 1,402,144 - -0.4 1,402,154 - +1.4 1,402,187 - +0.1 1,402,250 + -0.2 1,402,290 - -0.6 1,402,383 + +0.4 1,402,514 - BWI76_RS06690 0.14 +0.8 1,402,514 - BWI76_RS06690 0.14 -0.7 1,402,519 - BWI76_RS06690 0.15 +2.1 1,402,683 - BWI76_RS06690 0.30 -0.2 1,402,706 - BWI76_RS06690 0.32 -0.5 1,402,883 - BWI76_RS06690 0.48 -1.5 1,402,896 + BWI76_RS06690 0.49 -0.4 1,402,982 - BWI76_RS06690 0.56 +0.4 1,403,053 + BWI76_RS06690 0.63 -1.0 1,403,058 + BWI76_RS06690 0.63 -0.6 1,403,152 - BWI76_RS06690 0.72 -0.2 1,403,209 + BWI76_RS06690 0.77 -0.3 1,403,284 + BWI76_RS06690 0.84 +0.0 1,403,295 - BWI76_RS06690 0.85 -0.1 1,403,394 + +0.8 1,403,424 - -0.8 1,403,978 + BWI76_RS06695 0.13 -0.6 1,404,203 - BWI76_RS06695 0.31 -0.1 1,404,323 - BWI76_RS06695 0.41 -0.5 1,404,386 + BWI76_RS06695 0.46 -0.4 1,404,436 + BWI76_RS06695 0.50 -1.8
Or see this region's nucleotide sequence