Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12145

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
2,665,590	+		AO353_12135	0.88	-1.0
2,665,660	+				+1.0
2,665,660	+				-1.1
2,665,660	+				-0.3
2,665,660	+				+0.8
2,665,660	+				+1.1
2,665,660	+				-1.8
2,665,661	-				-1.7
2,665,661	-				-0.5
2,665,661	-				-0.3
2,665,661	-				+0.6
2,665,678	+				-0.3
2,665,678	+				-1.2
2,665,678	+				+0.9
2,665,678	+				-0.3
2,665,678	+				-0.3
2,665,678	+				-2.3
2,665,679	-				+0.1
2,665,707	+				+0.1
2,665,707	+				+0.2
2,665,707	+				+0.7
2,665,707	+				+0.1
2,665,707	+				-0.5
2,665,707	+				+1.3
2,665,707	+				-0.5
2,665,708	-				+0.7
2,665,708	-				+0.8
2,665,708	-				+0.4
2,665,708	-				+1.3
2,665,708	-				+0.2
2,665,708	-				-1.1
2,665,708	-				+0.1
2,665,708	-				+0.1
2,665,708	-				-1.5
2,665,708	-				+0.8
2,665,708	-				+0.3
2,665,708	-				+0.5
2,665,708	-				-0.0
2,665,708	-				-1.2
2,665,789	+		AO353_12140	0.19	+1.1
2,665,789	+		AO353_12140	0.19	-0.8
2,665,790	-		AO353_12140	0.19	+1.1
2,665,790	-		AO353_12140	0.19	+0.2
2,665,790	-		AO353_12140	0.19	+1.7
2,665,790	-		AO353_12140	0.19	-0.7
2,665,790	-		AO353_12140	0.19	+0.6
2,665,790	-		AO353_12140	0.19	-1.5
2,665,794	+		AO353_12140	0.20	+0.7
2,665,794	+		AO353_12140	0.20	+1.0
2,665,794	+		AO353_12140	0.20	+0.3
2,665,794	+		AO353_12140	0.20	+2.1
2,665,794	+		AO353_12140	0.20	-2.0
2,665,794	+		AO353_12140	0.20	-1.1
2,665,794	+		AO353_12140	0.20	+0.0
2,665,794	+		AO353_12140	0.20	+0.3
2,665,795	-				+1.9
2,665,795	-		AO353_12140	0.20	+0.9
2,665,795	-		AO353_12140	0.20	+0.2
2,665,795	-		AO353_12140	0.20	+1.0
2,665,795	-		AO353_12140	0.20	+0.0
2,665,879	+		AO353_12140	0.44	+1.5
2,665,879	+		AO353_12140	0.44	-0.7
2,665,975	+		AO353_12140	0.70	+0.4
2,665,976	-		AO353_12140	0.70	+0.5
2,666,081	+				-2.1
2,666,081	+				-1.2
2,666,081	+				-0.8
2,666,081	+				-0.6
2,666,081	+				+0.7
2,666,082	-				-0.5
2,666,082	-				+0.1
2,666,082	-				-1.5
2,666,082	-				+1.1
2,666,108	+				+0.3
2,666,109	-				-0.1
2,666,167	+				-0.4
2,666,167	+				-0.3
2,666,167	+				+0.6
2,666,167	+				+0.6
2,666,167	+				-0.9
2,666,167	+				-0.8
2,666,167	+				-0.0
2,666,167	+				-0.4
2,666,168	-				-0.4
2,666,168	-				+0.7
2,666,168	-				-1.1
2,666,168	-				+0.8
2,666,168	-				-1.7
2,666,168	-				+0.4
2,666,168	-				-1.7
2,666,168	-				-0.4
2,666,168	-				-0.1
2,666,168	-				-0.5
2,666,168	-				-0.7
2,666,168	-				+0.0
2,666,194	+				-2.0
2,666,241	+				-0.2
2,666,241	+				+0.2
2,666,242	-				-0.6
2,666,268	+				-0.7
2,666,268	+				+0.1
2,666,268	+				-2.6
2,666,268	+				-0.5
2,666,269	-				-0.6
2,666,269	-				-1.8
2,666,269	-				+0.2
2,666,272	+				-0.1
2,666,272	+				+0.8
2,666,273	-				+0.4
2,666,273	-				+0.2
2,666,430	-				+1.6
2,666,504	+				+0.2
2,666,505	-				-0.2
2,666,551	+				-0.7
2,666,551	+				+0.6
2,666,552	-				-1.5
2,666,552	-				-2.8
2,666,552	-				+0.1
2,666,552	-				+1.7
2,666,552	-				+0.5
2,666,552	-				+1.0
2,666,552	-				-0.7
2,666,554	-				-0.1
2,666,554	-				+1.4
2,666,654	+				-1.6
2,666,655	-				-1.8
2,666,655	-				-1.4
2,666,655	-				-1.8
2,666,657	+				-1.0
2,666,924	+		AO353_12145	0.25	-2.2
2,666,924	+		AO353_12145	0.25	-1.5
2,666,924	+		AO353_12145	0.25	-1.2
2,666,924	+		AO353_12145	0.25	-2.1
2,666,925	-		AO353_12145	0.25	-1.0
2,666,925	-		AO353_12145	0.25	-1.4
2,666,955	+		AO353_12145	0.27	-1.8
2,666,955	+		AO353_12145	0.27	-1.5
2,666,956	-		AO353_12145	0.27	-1.0
2,666,956	-		AO353_12145	0.27	-1.0
2,666,956	-		AO353_12145	0.27	-1.0
2,667,210	+		AO353_12145	0.45	-2.7
2,667,210	+		AO353_12145	0.45	-0.3
2,667,211	-		AO353_12145	0.45	-2.1
2,667,419	-		AO353_12145	0.60	-0.8
2,667,693	+		AO353_12145	0.79	-1.4
2,667,694	-		AO353_12145	0.79	-2.1
2,667,694	-		AO353_12145	0.79	-1.3
2,667,694	-		AO353_12145	0.79	-1.3
2,667,714	+		AO353_12145	0.80	-1.4
2,667,714	+		AO353_12145	0.80	-2.8
2,667,952	+				-2.5
2,667,953	-				-2.4
2,667,953	-				-0.5
2,667,989	-				-3.1
2,668,329	+		AO353_12150	0.31	-1.6
2,668,329	+		AO353_12150	0.31	-2.3
2,668,401	-		AO353_12150	0.37	-1.9
2,668,533	+		AO353_12150	0.50	-3.5
2,668,534	-		AO353_12150	0.50	-2.1
2,668,534	-		AO353_12150	0.50	-2.3
2,668,534	-		AO353_12150	0.50	-1.8
2,668,534	-		AO353_12150	0.50	-1.8
2,668,571	+		AO353_12150	0.53	-2.9
2,668,571	+		AO353_12150	0.53	-2.2
2,668,571	+		AO353_12150	0.53	-1.7
2,668,571	+		AO353_12150	0.53	-3.3
2,668,571	+		AO353_12150	0.53	-1.0
2,668,572	-		AO353_12150	0.53	-0.3
2,668,799	+		AO353_12150	0.74	-2.1
2,668,799	+		AO353_12150	0.74	-2.8
2,668,800	-		AO353_12150	0.74	-2.7
2,668,800	-		AO353_12150	0.74	-2.2
2,668,893	+		AO353_12150	0.83	-1.8
2,668,893	+		AO353_12150	0.83	-0.3
2,668,894	-		AO353_12150	0.83	-2.1
2,668,991	+				-2.6
2,668,991	+				-0.3
2,668,991	+				-1.4
2,668,991	+				-2.3
2,668,991	+				-1.6
2,668,991	+				-3.8
2,668,991	+				-2.6
2,668,991	+				-1.2
2,668,991	+				-3.9
2,668,991	+				-1.3
2,668,991	+				-1.9
2,668,991	+				-1.8
2,668,992	-				-1.6
2,668,992	-				+1.6
2,668,992	-				-0.5
2,668,992	-				-3.0
2,668,992	-				-3.3
2,668,992	-				-1.8
2,668,992	-				-2.4
2,668,992	-				-2.5
2,668,992	-				-1.0
2,668,992	-				-0.5
2,668,992	-				-2.5