Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06085

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
1,356,511	+		AO353_06080	0.45	-2.6
1,356,511	+		AO353_06080	0.45	+0.2
1,356,512	-		AO353_06080	0.45	-1.0
1,356,512	-		AO353_06080	0.45	+1.1
1,356,512	-		AO353_06080	0.45	-1.7
1,356,631	+		AO353_06080	0.53	-1.7
1,356,631	+		AO353_06080	0.53	-1.9
1,356,631	+		AO353_06080	0.53	-1.5
1,356,631	+		AO353_06080	0.53	+0.6
1,356,631	+		AO353_06080	0.53	-0.7
1,356,631	+		AO353_06080	0.53	-0.1
1,356,631	+		AO353_06080	0.53	-1.6
1,356,631	+		AO353_06080	0.53	-0.3
1,356,631	+		AO353_06080	0.53	-0.4
1,356,631	+		AO353_06080	0.53	-1.7
1,356,631	+		AO353_06080	0.53	-1.1
1,356,631	+		AO353_06080	0.53	-0.4
1,356,631	+		AO353_06080	0.53	+1.1
1,356,631	+		AO353_06080	0.53	+0.9
1,356,632	-		AO353_06080	0.53	-1.9
1,356,632	-		AO353_06080	0.53	+0.2
1,356,632	-		AO353_06080	0.53	-2.6
1,356,632	-		AO353_06080	0.53	-0.6
1,356,632	-		AO353_06080	0.53	+1.2
1,356,632	-		AO353_06080	0.53	+2.0
1,356,632	-		AO353_06080	0.53	+0.1
1,356,632	-		AO353_06080	0.53	-1.2
1,356,632	-		AO353_06080	0.53	-0.8
1,356,632	-		AO353_06080	0.53	-0.7
1,356,632	-		AO353_06080	0.53	-0.3
1,356,632	-		AO353_06080	0.53	-1.4
1,356,637	+		AO353_06080	0.54	+0.8
1,356,637	+		AO353_06080	0.54	+0.2
1,356,637	+		AO353_06080	0.54	+0.4
1,356,637	+		AO353_06080	0.54	-3.0
1,356,637	+		AO353_06080	0.54	-0.9
1,356,637	+		AO353_06080	0.54	-1.5
1,356,637	+		AO353_06080	0.54	-2.6
1,356,637	+		AO353_06080	0.54	-0.9
1,356,638	-		AO353_06080	0.54	-3.6
1,356,638	-		AO353_06080	0.54	-0.4
1,356,638	-		AO353_06080	0.54	-0.7
1,356,638	-		AO353_06080	0.54	-1.9
1,356,638	-		AO353_06080	0.54	-1.1
1,356,638	-		AO353_06080	0.54	-2.6
1,356,638	-		AO353_06080	0.54	-0.7
1,356,638	-		AO353_06080	0.54	+0.6
1,356,638	-		AO353_06080	0.54	-0.9
1,356,830	+		AO353_06080	0.67	+0.4
1,356,830	+		AO353_06080	0.67	-1.0
1,356,853	+		AO353_06080	0.68	-0.7
1,356,854	-		AO353_06080	0.68	-1.1
1,356,854	-		AO353_06080	0.68	-2.2
1,356,854	-		AO353_06080	0.68	+0.5
1,356,854	-		AO353_06080	0.68	-2.2
1,356,854	-		AO353_06080	0.68	-1.8
1,356,854	-		AO353_06080	0.68	-2.6
1,356,854	-		AO353_06080	0.68	-2.2
1,356,854	-		AO353_06080	0.68	-0.2
1,356,854	-		AO353_06080	0.68	-1.6
1,356,906	+		AO353_06080	0.72	+0.9
1,356,907	-		AO353_06080	0.72	+0.3
1,356,907	-		AO353_06080	0.72	-0.4
1,356,957	-		AO353_06080	0.75	-1.0
1,356,957	-		AO353_06080	0.75	-0.8
1,356,964	+		AO353_06080	0.76	-3.3
1,356,964	+		AO353_06080	0.76	-2.1
1,356,965	-		AO353_06080	0.76	-2.3
1,356,965	-		AO353_06080	0.76	-0.6
1,356,965	-		AO353_06080	0.76	-1.2
1,357,232	+				-2.3
1,357,233	-				-1.4
1,357,233	-				+1.0
1,357,233	-				-2.3
1,357,233	-				-0.2
1,357,388	+				-0.8
1,357,388	+				-0.4
1,357,388	+				+0.5
1,357,388	+				-0.7
1,357,388	+				+0.0
1,357,388	+				+0.7
1,357,388	+				+1.1
1,357,388	+				-0.4
1,357,388	+				-0.1
1,357,388	+				-1.1
1,357,388	+				-1.9
1,357,388	+				-0.9
1,357,388	+				-0.3
1,357,388	+				-1.7
1,357,388	+				-0.2
1,357,388	+				-0.4
1,357,388	+				-2.0
1,357,388	+				-0.3
1,357,388	+				-1.2
1,357,388	+				+0.6
1,357,388	+				-1.1
1,357,389	-				+1.0
1,357,389	-				+1.2
1,357,389	-				-1.9
1,357,389	-				-1.0
1,357,389	-				-1.1
1,357,389	-				+0.6
1,357,389	-				-1.0
1,357,389	-				-0.1
1,357,389	-				-0.7
1,357,389	-				-1.4
1,357,389	-				-0.8
1,357,389	-				+0.1
1,357,389	-				+2.0
1,357,389	-				-0.2
1,357,389	-				+1.2
1,357,390	+				-2.1
1,357,390	+				-0.4
1,357,390	+				-0.2
1,357,390	+				-0.3
1,357,390	+				-1.2
1,357,390	+				+0.3
1,357,390	+				-0.5
1,357,390	+				+0.1
1,357,390	+				-3.0
1,357,390	+				-1.6
1,357,390	+				-2.0
1,357,390	+				-1.5
1,357,391	-				+0.5
1,357,391	-				-0.9
1,357,391	-				-0.6
1,357,391	-				-0.1
1,357,391	-				+1.9
1,357,391	-				+0.2
1,357,391	-				+1.2
1,357,391	-				+0.3
1,357,391	-				+1.2
1,357,392	+				+1.1
1,357,392	+				-0.4
1,357,392	+				-1.4
1,357,392	+				-1.6
1,357,392	+				-0.6
1,357,392	+				-3.4
1,357,392	+				-0.3
1,357,392	+				+0.9
1,357,392	+				-1.8
1,357,392	+				-0.2
1,357,392	+				-0.6
1,357,392	+				-0.1
1,357,392	+				-0.2
1,357,392	+				+0.5
1,357,392	+				-0.7
1,357,392	+				+0.6
1,357,393	-				-0.0
1,357,393	-				+1.3
1,357,393	-				-0.6
1,357,393	-				-0.4
1,357,393	-				-0.5
1,357,393	-				-1.2
1,357,393	-				-0.4
1,357,393	-				-0.9
1,357,393	-				+0.5
1,357,393	-				+0.6
1,357,393	-				-1.1
1,357,393	-				+0.8
1,357,393	-				+0.0
1,357,516	+				-0.1
1,357,516	+				-2.7
1,357,516	+				-0.7
1,357,516	+				-1.6
1,357,516	+				-2.5
1,357,516	+				-4.4
1,357,516	+				-0.6
1,357,516	+				-2.9
1,357,516	+				-3.2
1,357,516	+				-3.6
1,357,517	-				-2.3
1,357,517	-				-0.1
1,357,517	-				-2.7
1,357,517	-				-2.7
1,357,517	-				-2.7
1,357,612	+		AO353_06085	0.15	-2.4
1,357,612	+		AO353_06085	0.15	-0.8
1,357,616	+		AO353_06085	0.16	-0.4
1,357,616	+		AO353_06085	0.16	-2.5
1,357,617	-		AO353_06085	0.16	-0.6
1,357,617	-		AO353_06085	0.16	-3.2
1,357,768	+		AO353_06085	0.27	-1.9
1,357,768	+		AO353_06085	0.27	-4.7
1,357,768	+		AO353_06085	0.27	-4.0
1,357,768	+		AO353_06085	0.27	-2.2
1,357,768	+		AO353_06085	0.27	-1.9
1,357,769	-		AO353_06085	0.27	-2.6
1,357,769	-		AO353_06085	0.27	-2.2
1,357,769	-		AO353_06085	0.27	-1.9
1,357,798	+		AO353_06085	0.29	-0.8
1,357,798	+		AO353_06085	0.29	-0.1
1,357,799	-		AO353_06085	0.29	-2.4
1,357,831	+		AO353_06085	0.32	-1.7
1,357,831	+		AO353_06085	0.32	-1.5
1,357,831	+		AO353_06085	0.32	-2.4
1,357,832	-		AO353_06085	0.32	-1.9
1,357,832	-		AO353_06085	0.32	-1.1
1,357,832	-		AO353_06085	0.32	-2.0
1,357,832	-		AO353_06085	0.32	-2.2
1,357,832	-		AO353_06085	0.32	-3.1
1,357,832	-		AO353_06085	0.32	-2.4
1,357,880	+		AO353_06085	0.35	-0.7
1,357,880	+		AO353_06085	0.35	-1.9
1,357,881	-		AO353_06085	0.35	-1.1
1,357,881	-		AO353_06085	0.35	-4.0
1,357,981	-		AO353_06085	0.43	-1.9
1,358,029	+		AO353_06085	0.46	-1.6
1,358,030	-		AO353_06085	0.46	-2.7
1,358,049	+		AO353_06085	0.48	-2.6
1,358,049	+		AO353_06085	0.48	-3.3
1,358,049	+		AO353_06085	0.48	-2.8
1,358,049	+		AO353_06085	0.48	-3.8
1,358,050	-		AO353_06085	0.48	-2.6
1,358,050	-		AO353_06085	0.48	+0.8
1,358,050	-		AO353_06085	0.48	-1.4
1,358,050	-		AO353_06085	0.48	-1.2
1,358,176	+		AO353_06085	0.57	-1.8
1,358,176	+		AO353_06085	0.57	-1.2
1,358,177	-		AO353_06085	0.57	-3.2
1,358,177	-		AO353_06085	0.57	-1.6
1,358,243	+		AO353_06085	0.62	-2.0
1,358,243	+		AO353_06085	0.62	-0.8
1,358,243	+		AO353_06085	0.62	-1.5
1,358,243	+		AO353_06085	0.62	-1.4
1,358,244	-		AO353_06085	0.62	-2.6
1,358,244	-		AO353_06085	0.62	-3.2
1,358,244	-		AO353_06085	0.62	-3.7
1,358,378	+		AO353_06085	0.72	-0.6
1,358,378	+		AO353_06085	0.72	-2.4
1,358,379	-		AO353_06085	0.72	-2.5
1,358,379	-		AO353_06085	0.72	-1.4
1,358,379	-		AO353_06085	0.72	-1.1
1,358,379	-		AO353_06085	0.72	-1.4
1,358,483	-		AO353_06085	0.80	-3.4
1,358,483	-		AO353_06085	0.80	-3.5
1,358,500	+		AO353_06085	0.81	-0.9
1,358,552	+		AO353_06085	0.85	-2.6
1,358,593	+		AO353_06085	0.88	-2.7
1,358,593	+		AO353_06085	0.88	-2.5
1,358,593	+		AO353_06085	0.88	-3.1
1,358,594	-		AO353_06085	0.88	-2.7
1,358,594	-		AO353_06085	0.88	-0.9
1,358,594	-		AO353_06085	0.88	-1.4
1,358,594	-		AO353_06085	0.88	-1.6
1,358,594	-		AO353_06085	0.88	-2.1
1,358,594	-		AO353_06085	0.88	-3.0
1,358,594	-		AO353_06085	0.88	-0.7
1,358,594	-		AO353_06085	0.88	-1.4
1,358,600	+		AO353_06085	0.89	-2.6
1,358,600	+		AO353_06085	0.89	-1.1
1,358,623	+				-4.1
1,358,623	+				-3.2
1,358,624	-				-2.2
1,358,624	-				-2.4
1,358,624	-				-1.2
1,358,683	+				-3.3
1,358,683	+				-1.7
1,358,683	+				-2.1
1,358,683	+				-2.0
1,358,684	-				-2.4
1,358,775	+				-0.6
1,358,785	-				-1.0
1,358,791	+				-1.4
1,358,791	+				-2.2
1,358,792	-				-0.1
1,358,792	-				-3.1
1,358,792	-				-0.6
1,358,792	-				+0.2
1,358,792	-				+0.0
1,358,809	+				-0.6
1,358,809	+				-3.0
1,358,809	+				-2.7
1,358,809	+				-0.8
1,358,809	+				-2.0
1,358,810	-				-0.9
1,358,810	-				-0.9
1,358,884	+				-1.7
1,359,126	+		AO353_06090	0.25	-2.6
1,359,127	-		AO353_06090	0.26	-2.3
1,359,145	+		AO353_06090	0.27	-1.8
1,359,145	+		AO353_06090	0.27	-3.8
1,359,146	-		AO353_06090	0.28	-2.1
1,359,146	-		AO353_06090	0.28	-1.4
1,359,146	-		AO353_06090	0.28	-3.4
1,359,146	-		AO353_06090	0.28	-2.8
1,359,146	-		AO353_06090	0.28	-2.8
1,359,146	-		AO353_06090	0.28	-0.8
1,359,146	-		AO353_06090	0.28	-1.5
1,359,148	+		AO353_06090	0.28	-1.5
1,359,148	+		AO353_06090	0.28	-2.6
1,359,148	+		AO353_06090	0.28	-1.6
1,359,148	+		AO353_06090	0.28	-2.5
1,359,148	+		AO353_06090	0.28	-2.2
1,359,148	+		AO353_06090	0.28	-2.5
1,359,148	+		AO353_06090	0.28	-3.3
1,359,148	+		AO353_06090	0.28	-2.4
1,359,149	-		AO353_06090	0.28	-2.5
1,359,149	-		AO353_06090	0.28	-1.5
1,359,149	-		AO353_06090	0.28	-2.4
1,359,149	-		AO353_06090	0.28	-2.4
1,359,149	-		AO353_06090	0.28	-3.5
1,359,149	-		AO353_06090	0.28	-0.8
1,359,411	+		AO353_06090	0.56	-2.8
1,359,423	+		AO353_06090	0.58	-2.9
1,359,424	-		AO353_06090	0.58	-0.1
1,359,439	+		AO353_06090	0.59	-0.0
1,359,444	+		AO353_06090	0.60	-2.4
1,359,444	+		AO353_06090	0.60	-1.9
1,359,444	+		AO353_06090	0.60	-3.3
1,359,445	-		AO353_06090	0.60	-2.4
1,359,445	-		AO353_06090	0.60	-3.9
1,359,445	-		AO353_06090	0.60	-2.9
1,359,445	-		AO353_06090	0.60	-0.4
1,359,445	-		AO353_06090	0.60	-1.7
1,359,471	+		AO353_06090	0.63	-1.6
1,359,471	+		AO353_06090	0.63	-1.4
1,359,471	+		AO353_06090	0.63	+0.2
1,359,472	-		AO353_06090	0.63	-1.2
1,359,472	-		AO353_06090	0.63	-4.2
1,359,472	-		AO353_06090	0.63	-2.6
1,359,483	-		AO353_06090	0.64	-2.4
1,359,509	+		AO353_06090	0.67	-2.7
1,359,510	-		AO353_06090	0.67	-1.9
1,359,564	+		AO353_06090	0.73	-0.4
1,359,636	+		AO353_06090	0.81	-2.4
1,359,637	-		AO353_06090	0.81	-3.9
1,359,637	-		AO353_06090	0.81	-1.1
1,359,637	-		AO353_06090	0.81	-2.8
1,359,637	-		AO353_06090	0.81	-3.4
1,359,637	-		AO353_06090	0.81	-1.9
1,359,646	-		AO353_06090	0.82	-1.4
1,359,660	+		AO353_06090	0.83	-2.9
1,359,720	+		AO353_06090	0.90	-0.9
1,359,720	+		AO353_06090	0.90	-2.3
1,359,720	+		AO353_06090	0.90	-2.2
1,359,720	+		AO353_06090	0.90	-3.8
1,359,720	+		AO353_06090	0.90	-2.2
1,359,721	-				-1.9
1,359,721	-				-2.3