Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05255

Experiment: Uridine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_05250 and AO353_05255 are separated by 210 nucleotidesAO353_05255 and AO353_05260 are separated by 16 nucleotides AO353_05250: AO353_05250 - rod shape-determining protein MreB, at 1,155,482 to 1,156,519 _05250 AO353_05255: AO353_05255 - glutamyl-tRNA amidotransferase, at 1,156,730 to 1,157,017 _05255 AO353_05260: AO353_05260 - glutamyl-tRNA amidotransferase, at 1,157,034 to 1,158,485 _05260 Position (kb) 1156 1157 1158Strain fitness (log2 ratio) -1 0 1 2at 1156.569 kb on - strandat 1156.651 kb on + strandat 1156.651 kb on + strandat 1156.651 kb on + strandat 1156.651 kb on + strandat 1156.651 kb on + strandat 1156.651 kb on + strandat 1156.651 kb on + strandat 1156.659 kb on + strandat 1156.670 kb on + strandat 1156.686 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uridine (N)
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1,156,569 - -0.1
1,156,651 + +1.7
1,156,651 + +2.5
1,156,651 + +1.3
1,156,651 + +1.2
1,156,651 + -0.2
1,156,651 + +0.6
1,156,651 + +0.8
1,156,659 + +0.3
1,156,670 + -0.3
1,156,686 + -0.3

Or see this region's nucleotide sequence