Experiment: Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0224 and BT0225 are separated by 41 nucleotides BT0225 and BT0226 are separated by 22 nucleotides BT0226 and BT0227 are separated by 20 nucleotides BT0227 and BT0228 are separated by 244 nucleotides
BT0224: BT0224 - hypothetical protein (NCBI ptt file), at 244,852 to 245,256
BT0224
BT0225: BT0225 - hypothetical protein (NCBI ptt file), at 245,298 to 245,891
BT0225
BT0226: BT0226 - hypothetical protein (NCBI ptt file), at 245,914 to 246,459
BT0226
BT0227: BT0227 - hypothetical protein (NCBI ptt file), at 246,480 to 247,109
BT0227
BT0228: BT0228 - putative protein involved in recombination (NCBI ptt file), at 247,354 to 249,387
BT0228
Position (kb) 245
246
247 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 244.982 kb on - strand, within BT0224 at 244.982 kb on - strand, within BT0224 at 245.221 kb on + strand at 245.300 kb on - strand at 245.320 kb on - strand at 245.324 kb on - strand at 245.542 kb on - strand, within BT0225 at 245.571 kb on + strand, within BT0225 at 245.695 kb on + strand, within BT0225 at 245.725 kb on - strand, within BT0225 at 245.827 kb on - strand, within BT0225 at 245.844 kb on + strand at 245.844 kb on + strand at 245.862 kb on + strand at 245.892 kb on - strand at 245.937 kb on + strand at 245.945 kb on + strand at 245.945 kb on + strand at 245.977 kb on + strand, within BT0226 at 246.051 kb on + strand, within BT0226 at 246.055 kb on - strand, within BT0226 at 246.056 kb on + strand, within BT0226 at 246.056 kb on + strand, within BT0226 at 246.056 kb on + strand, within BT0226 at 246.060 kb on + strand, within BT0226 at 246.122 kb on + strand, within BT0226 at 246.122 kb on + strand, within BT0226 at 246.190 kb on + strand, within BT0226 at 246.221 kb on + strand, within BT0226 at 246.338 kb on - strand, within BT0226 at 246.393 kb on + strand, within BT0226 at 246.404 kb on - strand, within BT0226 at 246.463 kb on - strand at 246.490 kb on + strand at 246.507 kb on + strand at 246.540 kb on - strand at 246.576 kb on - strand, within BT0227 at 246.686 kb on + strand, within BT0227 at 246.687 kb on - strand, within BT0227 at 246.696 kb on - strand, within BT0227 at 246.801 kb on + strand, within BT0227 at 246.802 kb on - strand, within BT0227 at 246.827 kb on - strand, within BT0227 at 246.836 kb on - strand, within BT0227 at 246.972 kb on + strand, within BT0227 at 247.027 kb on - strand, within BT0227 at 247.093 kb on - strand at 247.109 kb on + strand at 247.110 kb on - strand at 247.124 kb on - strand at 247.157 kb on + strand at 247.160 kb on + strand at 247.190 kb on - strand at 247.227 kb on - strand at 247.242 kb on + strand at 247.243 kb on - strand at 247.284 kb on + strand at 247.301 kb on - strand at 247.311 kb on - strand at 247.402 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.025 mg/ml remove 244,982 - BT0224 0.32 +0.6 244,982 - BT0224 0.32 -1.0 245,221 + +0.6 245,300 - +1.4 245,320 - -0.2 245,324 - -0.1 245,542 - BT0225 0.41 +0.0 245,571 + BT0225 0.46 -0.7 245,695 + BT0225 0.67 -1.6 245,725 - BT0225 0.72 -0.2 245,827 - BT0225 0.89 -0.3 245,844 + +1.2 245,844 + +0.0 245,862 + +1.6 245,892 - +0.8 245,937 + -0.7 245,945 + -1.6 245,945 + -0.7 245,977 + BT0226 0.12 -0.8 246,051 + BT0226 0.25 -0.7 246,055 - BT0226 0.26 -1.2 246,056 + BT0226 0.26 +0.6 246,056 + BT0226 0.26 +1.6 246,056 + BT0226 0.26 -2.6 246,060 + BT0226 0.27 -1.0 246,122 + BT0226 0.38 -0.8 246,122 + BT0226 0.38 -2.2 246,190 + BT0226 0.51 +2.2 246,221 + BT0226 0.56 +0.3 246,338 - BT0226 0.78 -1.4 246,393 + BT0226 0.88 -3.5 246,404 - BT0226 0.90 -0.7 246,463 - -0.6 246,490 + +0.6 246,507 + -1.8 246,540 - +1.6 246,576 - BT0227 0.15 +0.3 246,686 + BT0227 0.33 -1.2 246,687 - BT0227 0.33 -1.2 246,696 - BT0227 0.34 +1.2 246,801 + BT0227 0.51 -0.2 246,802 - BT0227 0.51 -1.0 246,827 - BT0227 0.55 -0.4 246,836 - BT0227 0.57 +1.6 246,972 + BT0227 0.78 +0.3 247,027 - BT0227 0.87 +0.6 247,093 - -0.4 247,109 + -0.9 247,110 - -0.8 247,124 - +0.0 247,157 + +1.6 247,160 + -1.2 247,190 - +0.3 247,227 - -1.9 247,242 + -0.4 247,243 - -2.1 247,284 + -0.8 247,301 - +0.0 247,311 - -0.2 247,402 + -0.1
Or see this region's nucleotide sequence