Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05725

Experiment: NAG carbon and (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG carbon and (N); with MOPS
1,289,708	-				+1.5
1,289,721	+		PFLU_RS05720	0.11	-0.3
1,289,721	+		PFLU_RS05720	0.11	+0.7
1,289,721	+		PFLU_RS05720	0.11	+1.7
1,289,721	+		PFLU_RS05720	0.11	+2.2
1,289,722	-		PFLU_RS05720	0.11	+2.0
1,289,722	-		PFLU_RS05720	0.11	-0.8
1,289,722	-		PFLU_RS05720	0.11	+0.8
1,289,722	-		PFLU_RS05720	0.11	+0.6
1,289,722	-		PFLU_RS05720	0.11	+0.4
1,289,722	-		PFLU_RS05720	0.11	+0.4
1,289,722	-		PFLU_RS05720	0.11	+0.3
1,289,722	-		PFLU_RS05720	0.11	+0.7
1,289,722	-		PFLU_RS05720	0.11	+1.2
1,289,722	-		PFLU_RS05720	0.11	+2.9
1,289,828	+		PFLU_RS05720	0.22	-0.3
1,289,828	+		PFLU_RS05720	0.22	+2.0
1,289,828	+		PFLU_RS05720	0.22	+1.5
1,289,828	+		PFLU_RS05720	0.22	-0.4
1,289,828	+		PFLU_RS05720	0.22	+0.7
1,289,828	+		PFLU_RS05720	0.22	+4.3
1,289,828	+		PFLU_RS05720	0.22	+1.9
1,289,829	-		PFLU_RS05720	0.23	+1.4
1,289,829	-		PFLU_RS05720	0.23	+0.7
1,289,829	-		PFLU_RS05720	0.23	-2.9
1,289,829	-		PFLU_RS05720	0.23	+0.4
1,289,829	-		PFLU_RS05720	0.23	+1.3
1,289,829	-		PFLU_RS05720	0.23	+1.3
1,289,829	-		PFLU_RS05720	0.23	+1.5
1,289,829	-		PFLU_RS05720	0.23	+0.4
1,289,829	-		PFLU_RS05720	0.23	-0.1
1,289,903	-		PFLU_RS05720	0.31	-1.4
1,289,903	-		PFLU_RS05720	0.31	+1.4
1,290,020	+		PFLU_RS05720	0.44	+1.6
1,290,054	+		PFLU_RS05720	0.47	+1.6
1,290,054	+		PFLU_RS05720	0.47	+2.4
1,290,080	+		PFLU_RS05720	0.50	-0.6
1,290,080	+		PFLU_RS05720	0.50	+0.7
1,290,080	+		PFLU_RS05720	0.50	+2.2
1,290,080	+		PFLU_RS05720	0.50	+0.8
1,290,081	-		PFLU_RS05720	0.50	+1.2
1,290,081	-		PFLU_RS05720	0.50	+1.7
1,290,081	-		PFLU_RS05720	0.50	+1.2
1,290,081	-		PFLU_RS05720	0.50	+0.6
1,290,081	-		PFLU_RS05720	0.50	-0.3
1,290,081	-		PFLU_RS05720	0.50	+2.3
1,290,081	-		PFLU_RS05720	0.50	+0.7
1,290,081	-		PFLU_RS05720	0.50	-1.3
1,290,089	+		PFLU_RS05720	0.51	+1.7
1,290,089	+		PFLU_RS05720	0.51	-0.3
1,290,089	+		PFLU_RS05720	0.51	+1.3
1,290,125	+		PFLU_RS05720	0.55	+1.7
1,290,125	+		PFLU_RS05720	0.55	-0.7
1,290,125	+		PFLU_RS05720	0.55	+1.7
1,290,125	+		PFLU_RS05720	0.55	-0.1
1,290,125	+		PFLU_RS05720	0.55	+0.8
1,290,126	-		PFLU_RS05720	0.55	+0.3
1,290,126	-		PFLU_RS05720	0.55	+0.7
1,290,126	-		PFLU_RS05720	0.55	-0.8
1,290,126	-		PFLU_RS05720	0.55	+0.2
1,290,247	+		PFLU_RS05720	0.69	-0.4
1,290,247	+		PFLU_RS05720	0.69	+2.1
1,290,335	+		PFLU_RS05720	0.78	+2.0
1,290,335	+		PFLU_RS05720	0.78	+1.6
1,290,335	+		PFLU_RS05720	0.78	+0.6
1,290,335	+		PFLU_RS05720	0.78	+1.7
1,290,335	+		PFLU_RS05720	0.78	+1.5
1,290,335	+		PFLU_RS05720	0.78	+0.3
1,290,335	+		PFLU_RS05720	0.78	+0.9
1,290,335	+		PFLU_RS05720	0.78	+1.5
1,290,335	+		PFLU_RS05720	0.78	+1.1
1,290,335	+		PFLU_RS05720	0.78	-0.8
1,290,336	-		PFLU_RS05720	0.78	+1.2
1,290,336	-		PFLU_RS05720	0.78	+1.9
1,290,336	-		PFLU_RS05720	0.78	+0.4
1,290,353	-		PFLU_RS05720	0.80	+1.7
1,290,410	-		PFLU_RS05720	0.86	+1.6
1,290,410	-		PFLU_RS05720	0.86	+0.2
1,290,410	-		PFLU_RS05720	0.86	+0.7
1,290,412	+		PFLU_RS05720	0.87	-2.1
1,290,412	+		PFLU_RS05720	0.87	+0.9
1,290,412	+		PFLU_RS05720	0.87	-0.1
1,290,412	+		PFLU_RS05720	0.87	+0.7
1,290,412	+		PFLU_RS05720	0.87	+1.4
1,290,413	-		PFLU_RS05720	0.87	-1.4
1,290,413	-		PFLU_RS05720	0.87	+1.7
1,290,413	-		PFLU_RS05720	0.87	+1.9
1,290,413	-		PFLU_RS05720	0.87	-0.1
1,290,413	-		PFLU_RS05720	0.87	+3.5
1,290,413	-		PFLU_RS05720	0.87	+1.1
1,290,413	-		PFLU_RS05720	0.87	+1.5
1,290,413	-		PFLU_RS05720	0.87	+1.1
1,290,413	-		PFLU_RS05720	0.87	-0.3
1,290,451	+				+0.9
1,290,451	+				+2.6
1,290,451	+				+3.0
1,290,451	+				+1.2
1,290,452	-				-0.8
1,290,530	+				+1.3
1,290,530	+				-2.1
1,290,530	+				+0.7
1,290,531	-				+2.4
1,290,531	-				+1.1
1,290,542	+				+0.2
1,290,542	+				+1.9
1,290,543	-				-1.3
1,290,573	+				+0.3
1,290,574	-				+1.6
1,290,586	+				+0.2
1,291,889	+				+0.3
1,291,890	-				+0.9
1,291,958	-				-0.0
1,291,989	+				+0.9
1,291,989	+				-2.5
1,291,990	-				-0.6
1,291,990	-				+0.6
1,291,990	-				+0.3
1,292,057	+				-1.1
1,292,058	-				-2.3
1,292,130	+				-1.7
1,292,133	-				+1.2
1,292,134	+				-1.0
1,292,135	-				-0.8
1,292,146	+				-1.3
1,292,161	-				+0.0
1,292,168	+				+0.2
1,292,168	+				+1.1
1,292,169	-				-0.8
1,292,169	-				+2.7
1,292,174	-				+0.6
1,292,191	+				+1.1
1,292,191	+				+1.2
1,292,261	+				-0.5
1,292,261	+				+0.4
1,292,261	+				+0.2
1,292,261	+				+0.4
1,292,261	+				+1.2
1,292,261	+				+0.7
1,292,261	+				+0.9
1,292,262	-				+1.3
1,292,262	-				-1.6
1,292,262	-				+0.2
1,292,262	-				-0.3
1,292,262	-				+2.5
1,292,262	-				+0.7
1,292,262	-				+0.4
1,292,262	-				+0.2
1,292,262	-				+0.1
1,292,262	-				-0.5
1,292,270	+				-2.6
1,292,270	+				+2.6
1,292,270	+				+2.4
1,292,270	+				+1.3
1,292,271	-				-1.0
1,292,271	-				-2.0
1,292,271	-				+0.6
1,292,301	+				+0.2
1,292,301	+				+1.3
1,292,301	+				-0.3
1,292,301	+				+0.7
1,292,302	-				-0.1
1,292,302	-				+0.7
1,292,302	-				-2.6
1,292,302	-				+0.2
1,292,316	-				-1.8
1,292,319	+				-2.2
1,292,319	+				+0.0
1,292,319	+				-1.1
1,292,319	+				+1.7
1,292,319	+				+1.0
1,292,320	-				-0.5
1,292,320	-				+0.9
1,292,320	-				+1.5
1,292,349	+				-0.4
1,292,360	-				-0.7
1,292,388	+				-2.4
1,292,389	-				-1.3
1,292,445	+				-1.6
1,292,445	+				+1.7
1,292,454	+				-1.1
1,292,470	+				-1.6
1,292,470	+				-1.1
1,292,523	-				-0.6
1,292,570	+				+0.3
1,292,571	-				-0.8
1,292,571	-				+0.2
1,292,571	-				+0.7
1,292,592	+		PFLU_RS05730	0.12	-1.7
1,292,593	-		PFLU_RS05730	0.12	-0.8
1,292,593	-		PFLU_RS05730	0.12	+1.3
1,292,651	+		PFLU_RS05730	0.21	-0.8
1,292,652	-		PFLU_RS05730	0.21	+0.2
1,292,652	-		PFLU_RS05730	0.21	-0.3
1,292,669	-		PFLU_RS05730	0.24	+0.3
1,292,708	+		PFLU_RS05730	0.30	+0.6
1,292,709	-		PFLU_RS05730	0.30	-0.4
1,292,820	+		PFLU_RS05730	0.48	-0.3
1,292,820	+		PFLU_RS05730	0.48	-0.9
1,292,820	+		PFLU_RS05730	0.48	+0.9
1,292,820	+		PFLU_RS05730	0.48	-0.5
1,292,820	+		PFLU_RS05730	0.48	+0.7
1,292,820	+		PFLU_RS05730	0.48	+1.1
1,292,821	-		PFLU_RS05730	0.48	-0.5
1,292,821	-		PFLU_RS05730	0.48	-0.2
1,292,821	-		PFLU_RS05730	0.48	-1.6
1,292,821	-		PFLU_RS05730	0.48	+0.0
1,292,821	-		PFLU_RS05730	0.48	-0.9
1,292,821	-		PFLU_RS05730	0.48	+0.9
1,292,821	-		PFLU_RS05730	0.48	+0.2
1,292,821	-		PFLU_RS05730	0.48	+0.9
1,292,851	+		PFLU_RS05730	0.53	-0.5
1,292,851	+		PFLU_RS05730	0.53	-2.1
1,292,852	-		PFLU_RS05730	0.53	-0.6
1,292,852	-		PFLU_RS05730	0.53	-3.2
1,292,883	+		PFLU_RS05730	0.58	-0.3
1,292,889	+		PFLU_RS05730	0.59	+2.3
1,292,889	+		PFLU_RS05730	0.59	+1.4
1,292,889	+		PFLU_RS05730	0.59	+1.0
1,292,889	+		PFLU_RS05730	0.59	+3.3
1,292,889	+		PFLU_RS05730	0.59	+0.2
1,292,889	+		PFLU_RS05730	0.59	-0.5
1,292,889	+		PFLU_RS05730	0.59	+1.0
1,292,889	+		PFLU_RS05730	0.59	-1.7
1,292,889	+		PFLU_RS05730	0.59	+1.7
1,292,890	-		PFLU_RS05730	0.59	-0.5
1,292,890	-		PFLU_RS05730	0.59	+0.2
1,292,890	-		PFLU_RS05730	0.59	+0.4
1,292,890	-		PFLU_RS05730	0.59	+0.5
1,292,890	-		PFLU_RS05730	0.59	+0.2
1,292,890	-		PFLU_RS05730	0.59	-0.3