Strain Fitness in Pantoea sp. MT58 around IAI47_16925

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
3,592,032	+		IAI47_16920	0.69	-2.5
3,592,073	+		IAI47_16920	0.71	+0.5
3,592,073	+		IAI47_16920	0.71	+1.9
3,592,073	+		IAI47_16920	0.71	-2.4
3,592,073	+		IAI47_16920	0.71	+0.9
3,592,074	-		IAI47_16920	0.71	-3.0
3,592,074	-		IAI47_16920	0.71	+0.7
3,592,106	+		IAI47_16920	0.72	+0.9
3,592,106	+		IAI47_16920	0.72	+0.2
3,592,106	+		IAI47_16920	0.72	+0.6
3,592,106	+		IAI47_16920	0.72	-0.9
3,592,106	+		IAI47_16920	0.72	+1.5
3,592,106	+		IAI47_16920	0.72	-1.4
3,592,106	+		IAI47_16920	0.72	-0.5
3,592,106	+		IAI47_16920	0.72	-3.6
3,592,106	+		IAI47_16920	0.72	+1.7
3,592,106	+		IAI47_16920	0.72	+0.7
3,592,106	+		IAI47_16920	0.72	-2.0
3,592,106	+		IAI47_16920	0.72	-0.1
3,592,107	-		IAI47_16920	0.72	-1.8
3,592,107	-		IAI47_16920	0.72	+1.0
3,592,107	-		IAI47_16920	0.72	-0.1
3,592,107	-		IAI47_16920	0.72	-1.0
3,592,107	-		IAI47_16920	0.72	+0.0
3,592,107	-		IAI47_16920	0.72	+1.5
3,592,109	+		IAI47_16920	0.72	+0.5
3,592,109	+		IAI47_16920	0.72	-1.3
3,592,109	+		IAI47_16920	0.72	-0.7
3,592,109	+		IAI47_16920	0.72	-2.4
3,592,109	+		IAI47_16920	0.72	+0.5
3,592,109	+		IAI47_16920	0.72	-0.9
3,592,109	+		IAI47_16920	0.72	+0.3
3,592,109	+		IAI47_16920	0.72	+2.3
3,592,109	+		IAI47_16920	0.72	-1.0
3,592,110	-		IAI47_16920	0.72	+1.9
3,592,110	-		IAI47_16920	0.72	-0.7
3,592,110	-		IAI47_16920	0.72	+0.2
3,592,110	-		IAI47_16920	0.72	+0.7
3,592,110	-		IAI47_16920	0.72	+1.1
3,592,110	-		IAI47_16920	0.72	-1.5
3,592,110	-		IAI47_16920	0.72	-0.1
3,592,239	+		IAI47_16920	0.78	-1.1
3,592,239	+		IAI47_16920	0.78	-0.2
3,592,239	+		IAI47_16920	0.78	-2.4
3,592,239	+		IAI47_16920	0.78	-1.8
3,592,239	+		IAI47_16920	0.78	-1.5
3,592,239	+		IAI47_16920	0.78	+1.9
3,592,239	+		IAI47_16920	0.78	-1.3
3,592,239	+		IAI47_16920	0.78	-2.1
3,592,239	+		IAI47_16920	0.78	+2.7
3,592,239	+		IAI47_16920	0.78	+0.5
3,592,239	+		IAI47_16920	0.78	-2.2
3,592,239	+		IAI47_16920	0.78	+0.7
3,592,239	+		IAI47_16920	0.78	-0.7
3,592,240	-		IAI47_16920	0.78	+3.1
3,592,240	-		IAI47_16920	0.78	-1.3
3,592,240	-		IAI47_16920	0.78	+0.3
3,592,240	-		IAI47_16920	0.78	+0.2
3,592,240	-		IAI47_16920	0.78	+0.1
3,592,240	-		IAI47_16920	0.78	-0.2
3,592,240	-		IAI47_16920	0.78	-1.3
3,592,249	+		IAI47_16920	0.78	+1.4
3,592,250	-		IAI47_16920	0.78	-1.5
3,592,250	-		IAI47_16920	0.78	-0.2
3,592,250	-		IAI47_16920	0.78	+2.3
3,592,257	+		IAI47_16920	0.79	-0.7
3,592,257	+		IAI47_16920	0.79	+1.0
3,592,325	+		IAI47_16920	0.81	-1.0
3,592,325	+		IAI47_16920	0.81	-0.3
3,592,325	+		IAI47_16920	0.81	-0.1
3,592,326	-		IAI47_16920	0.82	-1.1
3,592,326	-		IAI47_16920	0.82	+3.1
3,592,326	-		IAI47_16920	0.82	+0.2
3,592,380	+		IAI47_16920	0.84	-0.7
3,592,415	-		IAI47_16920	0.85	-0.5
3,592,448	+		IAI47_16920	0.87	-1.1
3,592,448	+		IAI47_16920	0.87	-0.6
3,592,448	+		IAI47_16920	0.87	+1.3
3,592,448	+		IAI47_16920	0.87	+0.8
3,592,449	-		IAI47_16920	0.87	+0.8
3,592,449	-		IAI47_16920	0.87	+1.2
3,592,449	-		IAI47_16920	0.87	-0.8
3,592,503	+		IAI47_16920	0.89	-0.1
3,592,503	+		IAI47_16920	0.89	-0.0
3,592,503	+		IAI47_16920	0.89	+1.0
3,592,504	-		IAI47_16920	0.89	+0.2
3,592,504	-		IAI47_16920	0.89	+0.0
3,592,504	-		IAI47_16920	0.89	-0.7
3,592,504	-		IAI47_16920	0.89	+1.3
3,592,504	-		IAI47_16920	0.89	+2.5
3,592,507	+		IAI47_16920	0.89	+2.6
3,592,507	+		IAI47_16920	0.89	+0.9
3,592,507	+		IAI47_16920	0.89	+0.8
3,592,507	+		IAI47_16920	0.89	-0.2
3,592,507	+		IAI47_16920	0.89	-1.6
3,592,507	+		IAI47_16920	0.89	-1.7
3,592,507	+		IAI47_16920	0.89	+0.4
3,592,507	+		IAI47_16920	0.89	+0.3
3,592,507	+		IAI47_16920	0.89	-0.4
3,592,507	+		IAI47_16920	0.89	-1.6
3,592,507	+		IAI47_16920	0.89	+1.3
3,592,507	+		IAI47_16920	0.89	-0.5
3,592,507	+		IAI47_16920	0.89	+2.2
3,592,507	+		IAI47_16920	0.89	+1.7
3,592,507	+		IAI47_16920	0.89	-2.0
3,592,507	+		IAI47_16920	0.89	-1.3
3,592,507	+		IAI47_16920	0.89	+3.6
3,592,507	+		IAI47_16920	0.89	-2.5
3,592,507	+		IAI47_16920	0.89	+1.4
3,592,507	+		IAI47_16920	0.89	-0.7
3,592,508	-		IAI47_16920	0.89	+0.4
3,592,508	-		IAI47_16920	0.89	+0.7
3,592,508	-		IAI47_16920	0.89	+3.0
3,592,508	-		IAI47_16920	0.89	-0.5
3,592,508	-		IAI47_16920	0.89	-0.7
3,592,508	-		IAI47_16920	0.89	-1.7
3,592,508	-		IAI47_16920	0.89	+1.3
3,592,508	-		IAI47_16920	0.89	-1.1
3,592,508	-		IAI47_16920	0.89	-0.1
3,592,508	-		IAI47_16920	0.89	+2.9
3,592,508	-		IAI47_16920	0.89	+0.3
3,592,508	-		IAI47_16920	0.89	-1.0
3,592,508	-		IAI47_16920	0.89	+1.2
3,592,508	-		IAI47_16920	0.89	-0.1
3,592,508	-		IAI47_16920	0.89	-1.0
3,592,509	+		IAI47_16920	0.89	+1.9
3,592,509	+		IAI47_16920	0.89	+0.0
3,592,509	+		IAI47_16920	0.89	+0.9
3,592,510	-				+1.9
3,592,510	-		IAI47_16920	0.89	+0.3
3,592,644	+				+1.2
3,592,644	+				-0.1
3,592,645	-				+0.9
3,592,645	-				+1.3
3,592,794	+				-1.4
3,592,814	+				-1.1
3,592,814	+				-0.5
3,592,814	+				-0.7
3,592,815	-				-1.3
3,592,834	-				-1.6
3,592,834	-				-0.3
3,592,842	+				+2.4
3,592,843	-				+2.7
3,592,878	+				-0.1
3,592,879	-				+0.2
3,592,942	-				-4.1
3,592,958	+				-3.3
3,592,958	+				-0.5
3,592,958	+				-2.4
3,592,958	+				-2.0
3,592,958	+				-0.8
3,592,958	+				-1.3
3,592,958	+				+1.1
3,592,958	+				+1.0
3,592,958	+				-2.3
3,592,959	-				-1.3
3,592,959	-				-1.9
3,592,959	-				-0.4
3,592,964	+				-2.7
3,592,964	+				+0.3
3,592,964	+				+0.7
3,592,964	+				-1.2
3,592,964	+				+0.7
3,592,964	+				+0.8
3,592,964	+				+1.2
3,592,964	+				+0.4
3,592,965	-				+0.6
3,592,965	-				-0.8
3,592,965	-				-0.1
3,592,965	-				-1.0
3,592,971	+				-0.6
3,592,971	+				-1.0
3,592,972	-				-1.0
3,592,989	+				-2.1
3,592,989	+				-2.2
3,592,989	+				+1.9
3,592,990	-				+0.2
3,592,990	-				-3.1
3,592,990	-				+1.8
3,592,990	-				-0.5
3,592,990	-				-1.4
3,592,991	+				+2.2
3,592,991	+				+0.7
3,592,991	+				-0.5
3,592,991	+				+1.1
3,592,991	+				+1.9
3,592,991	+				+1.8
3,592,991	+				-0.8
3,592,992	-				-1.7
3,592,992	-				-2.7
3,592,992	-				-0.1
3,592,992	-				-0.7
3,592,992	-				-3.4
3,592,992	-				-1.8
3,592,992	-				-1.7
3,592,992	-				-2.0
3,592,992	-				-0.8
3,592,992	-				+0.7
3,592,995	+				+0.4
3,592,995	+				+0.6
3,592,995	+				+2.9
3,592,995	+				+3.6
3,592,995	+				-3.2
3,592,995	+				-0.5
3,592,995	+				+0.6
3,592,995	+				+0.7
3,592,996	-				-0.1
3,592,996	-				-1.6
3,592,996	-				-0.5
3,592,996	-				-1.8
3,592,996	-				+0.6
3,592,996	-				-0.8
3,592,996	-				-2.0
3,592,996	-				-0.1
3,593,001	-				-2.5
3,593,031	+				-3.1
3,593,069	+				-1.0
3,593,070	-				-2.5
3,593,070	-				-2.6
3,593,070	-				-1.8
3,593,253	+		IAI47_16925	0.11	-0.2
3,593,253	+		IAI47_16925	0.11	-3.1
3,593,254	-		IAI47_16925	0.11	-1.1
3,593,254	-		IAI47_16925	0.11	-1.7
3,593,263	-		IAI47_16925	0.12	-0.5
3,593,305	+		IAI47_16925	0.14	-2.8
3,593,305	+		IAI47_16925	0.14	-0.8
3,593,306	-		IAI47_16925	0.14	-1.1
3,593,431	-		IAI47_16925	0.20	+0.3
3,593,431	-		IAI47_16925	0.20	-1.8
3,593,494	-		IAI47_16925	0.22	-2.9
3,593,494	-		IAI47_16925	0.22	-3.1
3,593,508	+		IAI47_16925	0.23	-0.6
3,593,558	+		IAI47_16925	0.25	-3.8
3,593,558	+		IAI47_16925	0.25	+0.3
3,593,558	+		IAI47_16925	0.25	-2.0
3,593,558	+		IAI47_16925	0.25	+0.1
3,593,559	-		IAI47_16925	0.26	-1.0
3,593,559	-		IAI47_16925	0.26	-3.8
3,593,559	-		IAI47_16925	0.26	-1.6
3,593,559	-		IAI47_16925	0.26	+0.2
3,593,606	+		IAI47_16925	0.28	+2.5
3,593,671	-		IAI47_16925	0.31	-4.0
3,593,686	+		IAI47_16925	0.31	-1.3
3,593,686	+		IAI47_16925	0.31	-1.8
3,593,687	-		IAI47_16925	0.32	+2.1
3,593,730	+		IAI47_16925	0.34	+0.2
3,593,730	+		IAI47_16925	0.34	-0.5
3,593,730	+		IAI47_16925	0.34	-1.9
3,593,730	+		IAI47_16925	0.34	+0.3
3,593,730	+		IAI47_16925	0.34	-3.1
3,593,730	+		IAI47_16925	0.34	+0.6
3,593,730	+		IAI47_16925	0.34	-0.3
3,593,731	-		IAI47_16925	0.34	-4.0
3,593,731	-		IAI47_16925	0.34	-1.8
3,593,731	-		IAI47_16925	0.34	-1.8
3,593,731	-		IAI47_16925	0.34	-2.0
3,593,731	-		IAI47_16925	0.34	-2.3
3,593,731	-		IAI47_16925	0.34	+0.1
3,593,731	-		IAI47_16925	0.34	-2.4
3,593,731	-		IAI47_16925	0.34	+0.9
3,593,731	-		IAI47_16925	0.34	-1.5
3,593,731	-		IAI47_16925	0.34	-0.7
3,593,733	-		IAI47_16925	0.34	-1.7
3,593,784	+		IAI47_16925	0.36	-1.6
3,593,784	+		IAI47_16925	0.36	+0.2
3,593,784	+		IAI47_16925	0.36	-2.1
3,593,784	+		IAI47_16925	0.36	-2.1
3,593,784	+		IAI47_16925	0.36	-1.8
3,593,785	-		IAI47_16925	0.36	-1.5
3,593,785	-		IAI47_16925	0.36	-1.3
3,593,814	+		IAI47_16925	0.37	+1.0
3,593,814	+		IAI47_16925	0.37	-0.8
3,593,814	+		IAI47_16925	0.37	-0.2
3,593,814	+		IAI47_16925	0.37	-2.3
3,593,814	+		IAI47_16925	0.37	-0.1
3,593,815	-		IAI47_16925	0.37	-2.7
3,593,815	-		IAI47_16925	0.37	-2.0
3,593,815	-		IAI47_16925	0.37	+3.8
3,593,839	-		IAI47_16925	0.39	-5.0
3,593,839	-		IAI47_16925	0.39	+0.7
3,593,849	+		IAI47_16925	0.39	-1.8
3,593,849	+		IAI47_16925	0.39	-0.8
3,594,047	+		IAI47_16925	0.48	-1.1
3,594,047	+		IAI47_16925	0.48	-0.7
3,594,048	-		IAI47_16925	0.48	-2.0
3,594,048	-		IAI47_16925	0.48	-2.2
3,594,048	-		IAI47_16925	0.48	-0.5
3,594,051	+		IAI47_16925	0.49	+0.4
3,594,051	+		IAI47_16925	0.49	-1.7
3,594,051	+		IAI47_16925	0.49	+0.3
3,594,051	+		IAI47_16925	0.49	-2.0
3,594,051	+		IAI47_16925	0.49	-1.3
3,594,051	+		IAI47_16925	0.49	-3.5
3,594,052	-		IAI47_16925	0.49	+0.3
3,594,052	-		IAI47_16925	0.49	-3.1
3,594,052	-		IAI47_16925	0.49	-1.5
3,594,097	-		IAI47_16925	0.51	-2.9
3,594,097	-		IAI47_16925	0.51	-1.5
3,594,097	-		IAI47_16925	0.51	-3.4
3,594,114	+		IAI47_16925	0.51	-0.6
3,594,115	-		IAI47_16925	0.52	-2.2
3,594,115	-		IAI47_16925	0.52	-1.1
3,594,115	-		IAI47_16925	0.52	-0.6
3,594,146	+		IAI47_16925	0.53	-3.4
3,594,146	+		IAI47_16925	0.53	-4.1
3,594,146	+		IAI47_16925	0.53	-1.3
3,594,184	-		IAI47_16925	0.55	-0.5
3,594,221	+		IAI47_16925	0.56	-1.0
3,594,221	+		IAI47_16925	0.56	+0.3
3,594,221	+		IAI47_16925	0.56	+1.5
3,594,222	-		IAI47_16925	0.57	-2.5
3,594,222	-		IAI47_16925	0.57	-0.5
3,594,222	-		IAI47_16925	0.57	-3.4
3,594,222	-		IAI47_16925	0.57	-2.1
3,594,222	-		IAI47_16925	0.57	-1.1
3,594,222	-		IAI47_16925	0.57	-3.4
3,594,225	-		IAI47_16925	0.57	-1.4
3,594,225	-		IAI47_16925	0.57	-2.2
3,594,390	+		IAI47_16925	0.64	-1.1
3,594,390	+		IAI47_16925	0.64	-3.4
3,594,390	+		IAI47_16925	0.64	+0.1
3,594,390	+		IAI47_16925	0.64	-1.1
3,594,390	+		IAI47_16925	0.64	+0.4
3,594,391	-		IAI47_16925	0.64	-2.2
3,594,391	-		IAI47_16925	0.64	-0.7
3,594,391	-		IAI47_16925	0.64	-3.9
3,594,391	-		IAI47_16925	0.64	-2.8
3,594,480	+		IAI47_16925	0.69	+0.8
3,594,480	+		IAI47_16925	0.69	-3.2
3,594,481	-		IAI47_16925	0.69	-2.9
3,594,481	-		IAI47_16925	0.69	-2.1
3,594,481	-		IAI47_16925	0.69	+0.3
3,594,481	-		IAI47_16925	0.69	+0.7
3,594,481	-		IAI47_16925	0.69	-1.0
3,594,481	-		IAI47_16925	0.69	-1.8
3,594,482	+		IAI47_16925	0.69	-2.1
3,594,482	+		IAI47_16925	0.69	-1.6
3,594,524	+		IAI47_16925	0.71	-0.2
3,594,524	+		IAI47_16925	0.71	-1.1
3,594,525	-		IAI47_16925	0.71	-0.1
3,594,525	-		IAI47_16925	0.71	+0.1
3,594,525	-		IAI47_16925	0.71	-1.3
3,594,534	+		IAI47_16925	0.71	-1.4
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