Strain Fitness in Pantoea sp. MT58 around IAI47_13420

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,847,111	-		IAI47_13415	0.29	+0.1
2,847,111	-		IAI47_13415	0.29	-0.4
2,847,111	-		IAI47_13415	0.29	+0.7
2,847,114	-		IAI47_13415	0.29	-1.3
2,847,114	-		IAI47_13415	0.29	+0.9
2,847,114	-		IAI47_13415	0.29	-0.1
2,847,114	-		IAI47_13415	0.29	-2.4
2,847,114	-		IAI47_13415	0.29	+0.3
2,847,116	+		IAI47_13415	0.29	-0.6
2,847,117	-		IAI47_13415	0.29	-2.6
2,847,117	-		IAI47_13415	0.29	-0.3
2,847,178	+		IAI47_13415	0.35	-1.6
2,847,178	+		IAI47_13415	0.35	-1.6
2,847,197	-		IAI47_13415	0.36	-1.8
2,847,197	-		IAI47_13415	0.36	+2.8
2,847,204	+		IAI47_13415	0.37	-0.3
2,847,211	+		IAI47_13415	0.38	-2.4
2,847,211	+		IAI47_13415	0.38	-1.3
2,847,211	+		IAI47_13415	0.38	-1.1
2,847,211	+		IAI47_13415	0.38	+1.7
2,847,211	+		IAI47_13415	0.38	-1.3
2,847,212	-		IAI47_13415	0.38	-1.5
2,847,212	-		IAI47_13415	0.38	-3.2
2,847,212	-		IAI47_13415	0.38	-3.7
2,847,247	+		IAI47_13415	0.41	+0.5
2,847,247	+		IAI47_13415	0.41	-2.0
2,847,247	+		IAI47_13415	0.41	-0.4
2,847,247	+		IAI47_13415	0.41	-2.0
2,847,247	+		IAI47_13415	0.41	-2.6
2,847,247	+		IAI47_13415	0.41	-0.6
2,847,247	+		IAI47_13415	0.41	-4.0
2,847,247	+		IAI47_13415	0.41	-1.3
2,847,247	+		IAI47_13415	0.41	-0.7
2,847,247	+		IAI47_13415	0.41	-0.6
2,847,247	+		IAI47_13415	0.41	-1.2
2,847,248	-		IAI47_13415	0.41	-0.9
2,847,248	-		IAI47_13415	0.41	-2.0
2,847,260	+		IAI47_13415	0.42	-0.5
2,847,327	-		IAI47_13415	0.48	-0.6
2,847,335	+		IAI47_13415	0.48	-2.3
2,847,335	+		IAI47_13415	0.48	-2.5
2,847,335	+		IAI47_13415	0.48	-1.7
2,847,335	+		IAI47_13415	0.48	+1.0
2,847,336	-		IAI47_13415	0.49	-1.5
2,847,350	+		IAI47_13415	0.50	-2.2
2,847,350	+		IAI47_13415	0.50	-0.4
2,847,350	+		IAI47_13415	0.50	-2.1
2,847,351	-		IAI47_13415	0.50	-0.1
2,847,351	-		IAI47_13415	0.50	-0.6
2,847,351	-		IAI47_13415	0.50	+0.1
2,847,443	+		IAI47_13415	0.58	+1.8
2,847,444	-		IAI47_13415	0.58	-1.9
2,847,471	+		IAI47_13415	0.60	-0.4
2,847,471	+		IAI47_13415	0.60	+0.7
2,847,472	-		IAI47_13415	0.60	-2.6
2,847,504	+		IAI47_13415	0.63	-1.5
2,847,504	+		IAI47_13415	0.63	-0.4
2,847,504	+		IAI47_13415	0.63	-3.4
2,847,504	+		IAI47_13415	0.63	-0.9
2,847,505	-		IAI47_13415	0.63	-1.0
2,847,524	+		IAI47_13415	0.65	+1.1
2,847,524	+		IAI47_13415	0.65	-1.6
2,847,524	+		IAI47_13415	0.65	-3.5
2,847,525	-		IAI47_13415	0.65	+0.3
2,847,538	+		IAI47_13415	0.66	+1.0
2,847,538	+		IAI47_13415	0.66	+1.7
2,847,539	-		IAI47_13415	0.66	-3.5
2,847,593	-		IAI47_13415	0.71	+0.2
2,847,652	+		IAI47_13415	0.76	+1.0
2,847,652	+		IAI47_13415	0.76	-1.2
2,847,653	-		IAI47_13415	0.76	+1.7
2,847,687	+		IAI47_13415	0.79	-3.2
2,847,688	-		IAI47_13415	0.79	+1.0
2,847,783	+		IAI47_13415	0.88	+1.7
2,847,809	-				+0.5
2,847,910	+				+1.0
2,847,921	-				-0.4
2,847,921	-				-2.7
2,847,921	-				-0.4
2,847,978	+				+0.8
2,847,978	+				-0.7
2,847,978	+				-0.9
2,847,979	-				-2.7
2,847,979	-				-0.6
2,847,996	+				-0.6
2,847,997	-				+0.1
2,848,029	+				-0.6
2,848,029	+				-0.6
2,848,029	+				+0.0
2,848,029	+				-0.1
2,848,030	-				+1.4
2,848,030	-				+0.1
2,848,030	-				-0.0
2,848,039	+				+1.2
2,848,039	+				-1.5
2,848,039	+				-0.5
2,848,039	+				+3.5
2,848,040	-				-2.3
2,848,040	-				-0.5
2,848,040	-				-0.2
2,848,040	-				+2.1
2,848,041	+				-1.5
2,848,041	+				+0.7
2,848,041	+				+0.8
2,848,041	+				+0.7
2,848,041	+				-2.2
2,848,041	+				-0.9
2,848,041	+				-0.8
2,848,041	+				+1.7
2,848,041	+				-0.2
2,848,042	-				+1.5
2,848,042	-				-1.5
2,848,042	-				+2.7
2,848,042	-				-1.2
2,848,051	-				-2.6
2,848,051	-				+2.8
2,848,075	+				+1.8
2,848,075	+				-0.6
2,848,076	-				+2.9
2,848,076	-				-0.9
2,848,076	-				-1.0
2,848,097	+				-0.6
2,848,097	+				-0.3
2,848,097	+				-0.2
2,848,097	+				-1.4
2,848,097	+				-1.1
2,848,098	-				-1.3
2,848,098	-				-1.9
2,848,098	-				+0.9
2,848,098	-				+2.9
2,848,098	-				+1.0
2,848,104	+				-0.6
2,848,104	+				+0.7
2,848,105	-				+0.9
2,848,105	-				-0.3
2,848,105	-				+0.8
2,848,105	-				-0.3
2,848,265	+				-0.1
2,848,265	+				+0.4
2,848,265	+				-0.3
2,848,266	-				+1.1
2,848,266	-				-1.9
2,848,281	+		IAI47_13420	0.11	-0.5
2,848,281	+		IAI47_13420	0.11	+2.7
2,848,281	+		IAI47_13420	0.11	-0.5
2,848,281	+		IAI47_13420	0.11	+0.2
2,848,282	-		IAI47_13420	0.11	-0.9
2,848,282	-		IAI47_13420	0.11	-3.0
2,848,282	-		IAI47_13420	0.11	-0.0
2,848,373	+		IAI47_13420	0.16	-1.3
2,848,373	+		IAI47_13420	0.16	+0.7
2,848,374	-		IAI47_13420	0.16	+1.1
2,848,374	-		IAI47_13420	0.16	+0.7
2,848,374	-		IAI47_13420	0.16	+3.7
2,848,383	+		IAI47_13420	0.17	-2.7
2,848,433	+		IAI47_13420	0.20	-0.5
2,848,439	+		IAI47_13420	0.21	+1.2
2,848,481	+		IAI47_13420	0.23	+0.4
2,848,482	-		IAI47_13420	0.23	-0.5
2,848,545	+		IAI47_13420	0.27	+1.5
2,848,545	+		IAI47_13420	0.27	+1.0
2,848,545	+		IAI47_13420	0.27	+1.7
2,848,545	+		IAI47_13420	0.27	+1.1
2,848,545	+		IAI47_13420	0.27	+2.2
2,848,545	+		IAI47_13420	0.27	-0.0
2,848,546	-		IAI47_13420	0.27	-1.5
2,848,546	-		IAI47_13420	0.27	-0.9
2,848,546	-		IAI47_13420	0.27	-1.8
2,848,546	-		IAI47_13420	0.27	+0.1
2,848,546	-		IAI47_13420	0.27	-0.0
2,848,546	-		IAI47_13420	0.27	-2.0
2,848,546	-		IAI47_13420	0.27	-0.9
2,848,546	-		IAI47_13420	0.27	-1.1
2,848,568	+		IAI47_13420	0.29	+1.3
2,848,568	+		IAI47_13420	0.29	+0.3
2,848,569	-		IAI47_13420	0.29	+2.1
2,848,569	-		IAI47_13420	0.29	+0.2
2,848,590	+		IAI47_13420	0.30	+1.4
2,848,591	-		IAI47_13420	0.30	-0.3
2,848,620	-		IAI47_13420	0.32	-1.1
2,848,693	+		IAI47_13420	0.36	+0.9
2,848,693	+		IAI47_13420	0.36	+0.2
2,848,693	+		IAI47_13420	0.36	+0.7
2,848,694	-		IAI47_13420	0.36	-0.7
2,848,722	+		IAI47_13420	0.38	-0.5
2,848,723	-		IAI47_13420	0.38	-0.2
2,848,732	+		IAI47_13420	0.39	+3.5
2,848,732	+		IAI47_13420	0.39	+1.1
2,848,732	+		IAI47_13420	0.39	-0.6
2,848,732	+		IAI47_13420	0.39	+1.5
2,848,732	+		IAI47_13420	0.39	+0.7
2,848,732	+		IAI47_13420	0.39	+2.7
2,848,732	+		IAI47_13420	0.39	+1.2
2,848,733	-		IAI47_13420	0.39	-0.4
2,848,733	-		IAI47_13420	0.39	+2.5
2,848,794	-		IAI47_13420	0.43	-2.5
2,848,794	-		IAI47_13420	0.43	+0.7
2,848,812	+		IAI47_13420	0.44	-0.5
2,848,813	-		IAI47_13420	0.44	+1.6
2,848,864	+		IAI47_13420	0.47	-0.3
2,848,934	+		IAI47_13420	0.51	-0.1
2,848,934	+		IAI47_13420	0.51	+0.0
2,848,935	-		IAI47_13420	0.51	-0.7
2,848,935	-		IAI47_13420	0.51	+0.8
2,848,935	-		IAI47_13420	0.51	+0.4
2,848,935	-		IAI47_13420	0.51	-1.6
2,848,935	-		IAI47_13420	0.51	+1.3
2,848,935	-		IAI47_13420	0.51	+1.4
2,848,935	-		IAI47_13420	0.51	+0.3
2,848,935	-		IAI47_13420	0.51	+1.0
2,848,968	+		IAI47_13420	0.54	-0.4
2,848,969	-		IAI47_13420	0.54	+1.9
2,848,969	-		IAI47_13420	0.54	-2.1
2,849,029	+		IAI47_13420	0.57	-0.1
2,849,029	+		IAI47_13420	0.57	-1.8
2,849,030	-		IAI47_13420	0.57	-0.5
2,849,030	-		IAI47_13420	0.57	+2.1
2,849,114	+		IAI47_13420	0.63	-0.6
2,849,114	+		IAI47_13420	0.63	+0.4
2,849,115	-		IAI47_13420	0.63	-2.8
2,849,115	-		IAI47_13420	0.63	+1.7
2,849,115	-		IAI47_13420	0.63	-1.6
2,849,167	+		IAI47_13420	0.66	+2.2
2,849,168	-		IAI47_13420	0.66	+1.1
2,849,204	+		IAI47_13420	0.68	-1.1
2,849,204	+		IAI47_13420	0.68	-2.8
2,849,205	-		IAI47_13420	0.68	+0.7
2,849,205	-		IAI47_13420	0.68	+0.3
2,849,205	-		IAI47_13420	0.68	+0.2
2,849,205	-		IAI47_13420	0.68	+0.2
2,849,205	-		IAI47_13420	0.68	-0.9
2,849,244	+		IAI47_13420	0.71	-1.6
2,849,244	+		IAI47_13420	0.71	+0.4
2,849,244	+		IAI47_13420	0.71	-0.4
2,849,244	+		IAI47_13420	0.71	-2.0
2,849,244	+		IAI47_13420	0.71	+2.6
2,849,244	+		IAI47_13420	0.71	+1.1
2,849,244	+		IAI47_13420	0.71	+3.9
2,849,244	+		IAI47_13420	0.71	-0.2
2,849,244	+		IAI47_13420	0.71	-1.3
2,849,245	-		IAI47_13420	0.71	-0.8
2,849,245	-		IAI47_13420	0.71	-0.4
2,849,245	-		IAI47_13420	0.71	-1.5
2,849,245	-		IAI47_13420	0.71	-1.1
2,849,245	-		IAI47_13420	0.71	+1.7
2,849,245	-		IAI47_13420	0.71	-3.3
2,849,245	-		IAI47_13420	0.71	+1.2
2,849,245	-		IAI47_13420	0.71	+0.7
2,849,245	-		IAI47_13420	0.71	+1.3
2,849,264	+		IAI47_13420	0.72	+1.5
2,849,264	+		IAI47_13420	0.72	-2.0
2,849,264	+		IAI47_13420	0.72	-1.3
2,849,265	-		IAI47_13420	0.72	-0.9
2,849,318	+		IAI47_13420	0.75	-0.6
2,849,318	+		IAI47_13420	0.75	-1.0
2,849,318	+		IAI47_13420	0.75	-0.7
2,849,319	-		IAI47_13420	0.75	+1.3
2,849,319	-		IAI47_13420	0.75	+0.7
2,849,472	+		IAI47_13420	0.85	+0.3
2,849,472	+		IAI47_13420	0.85	-1.8
2,849,473	-		IAI47_13420	0.85	+1.4
2,849,473	-		IAI47_13420	0.85	-0.3
2,849,473	-		IAI47_13420	0.85	+0.1
2,849,473	-		IAI47_13420	0.85	-2.5
2,849,473	-		IAI47_13420	0.85	-0.5
2,849,516	-		IAI47_13420	0.88	+1.7
2,849,516	-		IAI47_13420	0.88	+0.3
2,849,552	+				-1.0
2,849,552	+				+2.0
2,849,553	-				-3.3
2,849,553	-				+1.2
2,849,628	-				-2.9
2,849,647	+				+1.2
2,849,650	+				-0.5
2,849,650	+				+0.9
2,849,650	+				+1.4
2,849,650	+				-0.8
2,849,650	+				-1.2
2,849,650	+				-2.0
2,849,650	+				-0.9
2,849,650	+				-2.6
2,849,651	-				-0.3
2,849,651	-				+0.1
2,849,651	-				-2.2
2,849,651	-				-0.3
2,849,651	-				+0.3
2,849,651	-				+1.7
2,849,651	-				-2.0
2,849,667	-				-1.3
2,849,667	-				+2.3
2,849,688	+				-2.1
2,849,689	-				+0.9
2,849,699	+				-0.0
2,849,759	+				-1.0
2,849,759	+				+1.7
2,849,759	+				-0.4
2,849,759	+				+0.0
2,849,760	-				-1.9
2,849,788	-				-0.3
2,849,800	+				+0.8
2,849,800	+				+0.4
2,849,807	+				-0.6
2,849,807	+				-0.9
2,849,808	-				+0.1
2,849,842	-				-1.5
2,849,925	+		IAI47_13425	0.14	+0.6
2,849,925	+		IAI47_13425	0.14	-0.2
2,849,925	+		IAI47_13425	0.14	+0.5
2,849,925	+		IAI47_13425	0.14	-1.3
2,849,925	+		IAI47_13425	0.14	-3.1
2,849,925	+		IAI47_13425	0.14	-0.4
2,849,925	+		IAI47_13425	0.14	+1.3
2,849,926	-		IAI47_13425	0.14	+1.7
2,849,969	+		IAI47_13425	0.17	+0.0
2,849,970	-		IAI47_13425	0.18	-0.5
2,849,970	-		IAI47_13425	0.18	-3.0
2,850,067	+		IAI47_13425	0.26	-0.4
2,850,068	-		IAI47_13425	0.26	-0.2
2,850,068	-		IAI47_13425	0.26	-1.2
2,850,068	-		IAI47_13425	0.26	-0.1
2,850,068	-		IAI47_13425	0.26	-2.1
2,850,068	-		IAI47_13425	0.26	+0.6
2,850,105	-		IAI47_13425	0.29	+0.8
2,850,105	-		IAI47_13425	0.29	-1.8
2,850,136	+		IAI47_13425	0.31	-3.4
2,850,136	+		IAI47_13425	0.31	-0.9
2,850,136	+		IAI47_13425	0.31	-1.9
2,850,137	-		IAI47_13425	0.32	-1.1
2,850,137	-		IAI47_13425	0.32	+0.9
2,850,195	+		IAI47_13425	0.36	+2.2
2,850,196	-		IAI47_13425	0.37	-3.6
2,850,235	+		IAI47_13425	0.40	-1.1
2,850,236	-		IAI47_13425	0.40	+0.5
2,850,236	-		IAI47_13425	0.40	+0.2
2,850,236	-		IAI47_13425	0.40	+2.6
2,850,236	-		IAI47_13425	0.40	-0.3
2,850,238	+		IAI47_13425	0.40	-0.8
2,850,238	+		IAI47_13425	0.40	-0.1
2,850,238	+		IAI47_13425	0.40	-1.6
2,850,238	+		IAI47_13425	0.40	-0.8
2,850,238	+		IAI47_13425	0.40	-0.3
2,850,238	+		IAI47_13425	0.40	-2.5
2,850,239	-		IAI47_13425	0.40	+1.0
2,850,239	-		IAI47_13425	0.40	-2.1
2,850,239	-		IAI47_13425	0.40	-0.9
2,850,239	-		IAI47_13425	0.40	+3.1
2,850,239	-		IAI47_13425	0.40	+0.9
2,850,239	-		IAI47_13425	0.40	+1.7
2,850,239	-		IAI47_13425	0.40	+0.7
2,850,239	-		IAI47_13425	0.40	+0.7
2,850,291	+		IAI47_13425	0.45	-0.6
2,850,291	+		IAI47_13425	0.45	-2.6
2,850,292	-		IAI47_13425	0.45	+0.8
2,850,292	-		IAI47_13425	0.45	+0.7
2,850,292	-		IAI47_13425	0.45	-1.1
2,850,292	-		IAI47_13425	0.45	-0.6
2,850,480	+		IAI47_13425	0.60	+0.3
2,850,480	+		IAI47_13425	0.60	-2.0
2,850,481	-		IAI47_13425	0.61	-3.0
2,850,481	-		IAI47_13425	0.61	+0.8
2,850,481	-		IAI47_13425	0.61	-4.3
2,850,481	-		IAI47_13425	0.61	+1.0
2,850,481	-		IAI47_13425	0.61	-1.0
2,850,535	+		IAI47_13425	0.65	+0.8
2,850,536	-		IAI47_13425	0.65	-1.9
2,850,553	+		IAI47_13425	0.67	-2.7
2,850,553	+		IAI47_13425	0.67	+0.8
2,850,554	-		IAI47_13425	0.67	+1.8
2,850,658	+		IAI47_13425	0.75	-3.0
2,850,658	+		IAI47_13425	0.75	-0.3