Strain Fitness in Pantoea sp. MT58 around IAI47_09570

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,022,641	+		IAI47_09565	0.40	+0.4
2,022,642	-		IAI47_09565	0.40	-0.5
2,022,699	+		IAI47_09565	0.44	+2.2
2,022,700	-		IAI47_09565	0.44	-0.1
2,022,728	+		IAI47_09565	0.46	+0.3
2,022,729	-		IAI47_09565	0.46	+1.5
2,022,729	-		IAI47_09565	0.46	-1.3
2,022,729	-		IAI47_09565	0.46	-0.0
2,022,774	-		IAI47_09565	0.49	-0.5
2,023,002	+		IAI47_09565	0.64	-1.8
2,023,002	+		IAI47_09565	0.64	+1.6
2,023,003	-		IAI47_09565	0.64	+1.3
2,023,003	-		IAI47_09565	0.64	+0.2
2,023,081	+		IAI47_09565	0.69	+2.6
2,023,081	+		IAI47_09565	0.69	+0.1
2,023,088	-		IAI47_09565	0.69	+1.3
2,023,238	+		IAI47_09565	0.79	+0.5
2,023,238	+		IAI47_09565	0.79	-2.0
2,023,239	-		IAI47_09565	0.79	+1.1
2,023,239	-		IAI47_09565	0.79	-2.7
2,023,307	+		IAI47_09565	0.84	+0.5
2,023,308	-		IAI47_09565	0.84	-0.2
2,023,308	-		IAI47_09565	0.84	+0.6
2,023,338	+		IAI47_09565	0.86	+1.1
2,023,338	+		IAI47_09565	0.86	+0.1
2,023,339	-		IAI47_09565	0.86	+1.5
2,023,341	+		IAI47_09565	0.86	-1.0
2,023,341	+		IAI47_09565	0.86	-1.2
2,023,341	+		IAI47_09565	0.86	+0.5
2,023,341	+		IAI47_09565	0.86	+1.9
2,023,341	+		IAI47_09565	0.86	+1.9
2,023,341	+		IAI47_09565	0.86	-1.3
2,023,341	+		IAI47_09565	0.86	+0.6
2,023,341	+		IAI47_09565	0.86	+1.0
2,023,341	+		IAI47_09565	0.86	+1.8
2,023,342	-		IAI47_09565	0.86	-0.8
2,023,342	-		IAI47_09565	0.86	-0.5
2,023,342	-		IAI47_09565	0.86	-1.3
2,023,342	-		IAI47_09565	0.86	-0.1
2,023,342	-		IAI47_09565	0.86	+0.6
2,023,342	-		IAI47_09565	0.86	-1.1
2,023,342	-		IAI47_09565	0.86	-3.2
2,023,373	+		IAI47_09565	0.88	-0.5
2,023,373	+		IAI47_09565	0.88	+3.1
2,023,373	+		IAI47_09565	0.88	-0.8
2,023,374	-		IAI47_09565	0.88	+0.2
2,023,374	-		IAI47_09565	0.88	+1.2
2,023,463	+				-0.4
2,023,463	+				-1.1
2,023,464	-				-0.4
2,023,472	+				+0.9
2,023,472	+				+0.9
2,023,472	+				-3.5
2,023,473	-				-1.0
2,023,473	-				-1.1
2,023,499	+				-0.1
2,023,499	+				-0.5
2,023,499	+				+1.0
2,023,500	-				+2.5
2,023,500	-				+1.7
2,023,500	-				+0.8
2,023,500	-				-0.8
2,023,548	-				-2.2
2,023,548	-				+0.1
2,023,554	+				-1.3
2,023,555	-				+0.9
2,023,555	-				+0.2
2,023,574	-				+3.1
2,023,587	+				-0.1
2,023,587	+				-0.7
2,023,587	+				-1.3
2,023,587	+				+0.5
2,023,587	+				+1.4
2,023,587	+				-1.0
2,023,587	+				+1.0
2,023,588	-				+1.5
2,023,588	-				-1.0
2,023,588	-				+1.7
2,023,588	-				-0.4
2,023,588	-				-2.3
2,023,589	+				+0.9
2,023,589	+				-1.3
2,023,589	+				-0.0
2,023,589	+				-0.8
2,023,589	+				-0.6
2,023,589	+				-0.1
2,023,589	+				-0.4
2,023,590	-				-0.5
2,023,590	-				-0.2
2,023,590	-				+0.4
2,023,616	+				+1.0
2,023,616	+				-0.5
2,023,617	-				+0.7
2,023,617	-				-0.5
2,023,650	-				+1.3
2,023,661	+				-2.1
2,023,661	+				+0.9
2,023,662	-				+0.5
2,023,662	-				+1.3
2,023,724	+		IAI47_09570	0.12	-1.1
2,023,766	+		IAI47_09570	0.15	+0.4
2,023,875	+		IAI47_09570	0.23	-1.1
2,023,875	+		IAI47_09570	0.23	+0.5
2,023,875	+		IAI47_09570	0.23	-0.5
2,023,875	+		IAI47_09570	0.23	+3.1
2,023,875	+		IAI47_09570	0.23	+2.1
2,023,875	+		IAI47_09570	0.23	+1.5
2,023,875	+		IAI47_09570	0.23	+1.7
2,023,875	+		IAI47_09570	0.23	-1.7
2,023,875	+		IAI47_09570	0.23	+0.9
2,023,876	-		IAI47_09570	0.23	-0.5
2,023,876	-		IAI47_09570	0.23	-2.1
2,023,876	-		IAI47_09570	0.23	-0.8
2,023,876	-		IAI47_09570	0.23	-2.0
2,023,876	-		IAI47_09570	0.23	-2.1
2,023,876	-		IAI47_09570	0.23	+0.1
2,023,877	+		IAI47_09570	0.23	-1.2
2,023,878	-		IAI47_09570	0.23	+2.0
2,023,938	-		IAI47_09570	0.27	+1.2
2,024,096	+		IAI47_09570	0.39	+1.3
2,024,199	-		IAI47_09570	0.46	+0.5
2,024,229	+		IAI47_09570	0.48	-0.2
2,024,230	-		IAI47_09570	0.48	-0.8
2,024,328	+		IAI47_09570	0.55	+1.1
2,024,328	+		IAI47_09570	0.55	+0.9
2,024,328	+		IAI47_09570	0.55	-1.2
2,024,328	+		IAI47_09570	0.55	+0.5
2,024,328	+		IAI47_09570	0.55	-0.1
2,024,328	+		IAI47_09570	0.55	-1.1
2,024,328	+		IAI47_09570	0.55	-0.4
2,024,328	+		IAI47_09570	0.55	-0.4
2,024,328	+		IAI47_09570	0.55	+1.2
2,024,328	+		IAI47_09570	0.55	+0.2
2,024,329	-		IAI47_09570	0.55	+0.8
2,024,329	-		IAI47_09570	0.55	-1.5
2,024,329	-		IAI47_09570	0.55	+1.9
2,024,329	-		IAI47_09570	0.55	+0.5
2,024,329	-		IAI47_09570	0.55	-0.5
2,024,329	-		IAI47_09570	0.55	-0.0
2,024,329	-		IAI47_09570	0.55	+1.2
2,024,330	+		IAI47_09570	0.55	+0.9
2,024,330	+		IAI47_09570	0.55	+0.3
2,024,330	+		IAI47_09570	0.55	+1.0
2,024,331	-		IAI47_09570	0.56	+0.3
2,024,331	-		IAI47_09570	0.56	+0.5
2,024,331	-		IAI47_09570	0.56	+1.2
2,024,331	-		IAI47_09570	0.56	+3.5
2,024,331	-		IAI47_09570	0.56	+1.0
2,024,331	-		IAI47_09570	0.56	-0.4
2,024,339	+		IAI47_09570	0.56	-1.3
2,024,340	-		IAI47_09570	0.56	-1.3
2,024,340	-		IAI47_09570	0.56	+1.0
2,024,340	-		IAI47_09570	0.56	-0.2
2,024,340	-		IAI47_09570	0.56	+0.5
2,024,340	-		IAI47_09570	0.56	+2.7
2,024,469	-		IAI47_09570	0.65	-3.1
2,024,489	+		IAI47_09570	0.67	-0.1
2,024,489	+		IAI47_09570	0.67	-0.2
2,024,489	+		IAI47_09570	0.67	-0.1
2,024,489	+		IAI47_09570	0.67	+1.7
2,024,489	+		IAI47_09570	0.67	+1.4
2,024,489	+		IAI47_09570	0.67	+0.3
2,024,490	-		IAI47_09570	0.67	+0.6
2,024,490	-		IAI47_09570	0.67	+1.5
2,024,490	-		IAI47_09570	0.67	-0.4
2,024,490	-		IAI47_09570	0.67	+1.2
2,024,493	-		IAI47_09570	0.67	+0.2
2,024,493	-		IAI47_09570	0.67	+0.6
2,024,502	+		IAI47_09570	0.68	+0.2
2,024,655	+		IAI47_09570	0.79	+1.8
2,024,655	+		IAI47_09570	0.79	+1.5
2,024,656	-		IAI47_09570	0.79	-1.6
2,024,656	-		IAI47_09570	0.79	+0.3
2,024,656	-		IAI47_09570	0.79	+1.8
2,024,656	-		IAI47_09570	0.79	-2.0
2,024,656	-		IAI47_09570	0.79	+0.7
2,024,676	+		IAI47_09570	0.80	-0.1
2,024,730	-		IAI47_09570	0.84	-1.1
2,024,851	-				-0.1
2,024,851	-				-1.5
2,024,851	-				+1.5
2,024,946	+				-1.5
2,024,946	+				+0.2
2,024,947	-				-2.1
2,024,965	+				-2.0
2,024,965	+				-0.8
2,024,966	-				+0.3
2,024,966	-				-2.0
2,025,057	+				+0.6
2,025,058	-				-0.2
2,025,127	+		IAI47_09575	0.13	-1.3
2,025,160	+		IAI47_09575	0.17	-0.2
2,025,217	-		IAI47_09575	0.23	+3.1
2,025,305	+		IAI47_09575	0.32	+0.0
2,025,305	+		IAI47_09575	0.32	+2.0
2,025,306	-		IAI47_09575	0.32	+0.5
2,025,342	+		IAI47_09575	0.36	+0.5
2,025,342	+		IAI47_09575	0.36	-0.3
2,025,342	+		IAI47_09575	0.36	-0.1
2,025,343	-		IAI47_09575	0.36	-0.1
2,025,343	-		IAI47_09575	0.36	-1.3
2,025,343	-		IAI47_09575	0.36	-2.3
2,025,343	-		IAI47_09575	0.36	+2.8
2,025,343	-		IAI47_09575	0.36	-0.1
2,025,362	+		IAI47_09575	0.38	+1.1
2,025,492	+		IAI47_09575	0.52	+1.5
2,025,493	-		IAI47_09575	0.52	-0.5
2,025,546	+		IAI47_09575	0.57	+2.0
2,025,546	+		IAI47_09575	0.57	+0.1
2,025,546	+		IAI47_09575	0.57	+1.5
2,025,546	+		IAI47_09575	0.57	-1.1
2,025,546	+		IAI47_09575	0.57	+0.1
2,025,547	-		IAI47_09575	0.57	-0.1
2,025,547	-		IAI47_09575	0.57	+1.2
2,025,547	-		IAI47_09575	0.57	-1.4
2,025,547	-		IAI47_09575	0.57	+1.5
2,025,693	+		IAI47_09575	0.73	+0.7
2,025,694	-		IAI47_09575	0.73	+1.2
2,025,719	+		IAI47_09575	0.75	-0.6
2,025,719	+		IAI47_09575	0.75	+0.8
2,025,720	-		IAI47_09575	0.75	+0.9
2,025,720	-		IAI47_09575	0.75	+1.8
2,025,751	-		IAI47_09575	0.79	-2.0
2,025,777	+		IAI47_09575	0.81	+0.2
2,025,818	+		IAI47_09575	0.86	+1.3
2,025,819	-		IAI47_09575	0.86	-0.5
2,025,830	+		IAI47_09575	0.87	+3.0
2,025,835	-		IAI47_09575	0.87	-1.1
2,025,835	-		IAI47_09575	0.87	+0.3
2,025,835	-		IAI47_09575	0.87	+2.5
2,025,835	-		IAI47_09575	0.87	+0.9
2,025,835	-		IAI47_09575	0.87	+3.1
2,025,849	+		IAI47_09575	0.89	-0.2
2,025,849	+		IAI47_09575	0.89	-1.3
2,025,849	+		IAI47_09575	0.89	+2.1
2,025,850	-		IAI47_09575	0.89	-0.3
2,025,850	-		IAI47_09575	0.89	+1.3
2,025,878	+				-1.1
2,025,878	+				+0.7
2,025,937	-				-0.8
2,025,937	-				+0.2
2,025,937	-				+1.8