Strain Fitness in Pantoea sp. MT58 around IAI47_09565

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,021,113	-		IAI47_09560	0.61	+2.8
2,021,113	-		IAI47_09560	0.61	+0.6
2,021,132	+		IAI47_09560	0.63	+0.9
2,021,132	+		IAI47_09560	0.63	-1.1
2,021,132	+		IAI47_09560	0.63	+0.2
2,021,133	-		IAI47_09560	0.63	+1.5
2,021,133	-		IAI47_09560	0.63	+0.9
2,021,133	-		IAI47_09560	0.63	-3.0
2,021,157	+		IAI47_09560	0.66	+0.5
2,021,177	+		IAI47_09560	0.68	-1.3
2,021,177	+		IAI47_09560	0.68	-2.7
2,021,177	+		IAI47_09560	0.68	-1.9
2,021,177	+		IAI47_09560	0.68	+1.1
2,021,177	+		IAI47_09560	0.68	+1.3
2,021,178	-		IAI47_09560	0.68	-2.3
2,021,178	-		IAI47_09560	0.68	-1.1
2,021,214	+		IAI47_09560	0.72	-0.1
2,021,215	-		IAI47_09560	0.72	-1.5
2,021,216	+		IAI47_09560	0.72	-2.0
2,021,217	-		IAI47_09560	0.72	-0.8
2,021,217	-		IAI47_09560	0.72	-1.9
2,021,241	+		IAI47_09560	0.74	-0.4
2,021,241	+				-0.8
2,021,257	-		IAI47_09560	0.76	+0.2
2,021,279	+		IAI47_09560	0.78	-3.4
2,021,279	+		IAI47_09560	0.78	+0.0
2,021,279	+		IAI47_09560	0.78	-0.9
2,021,279	+		IAI47_09560	0.78	+3.5
2,021,279	+		IAI47_09560	0.78	-0.5
2,021,279	+		IAI47_09560	0.78	+0.7
2,021,279	+		IAI47_09560	0.78	-1.3
2,021,280	-		IAI47_09560	0.79	+0.1
2,021,280	-		IAI47_09560	0.79	-1.8
2,021,280	-		IAI47_09560	0.79	-0.8
2,021,280	-		IAI47_09560	0.79	-0.5
2,021,280	-		IAI47_09560	0.79	+2.5
2,021,280	-		IAI47_09560	0.79	-3.0
2,021,280	-		IAI47_09560	0.79	-1.5
2,021,280	-		IAI47_09560	0.79	-2.1
2,021,280	-		IAI47_09560	0.79	+1.5
2,021,282	+		IAI47_09560	0.79	+0.6
2,021,282	+		IAI47_09560	0.79	-2.9
2,021,282	+		IAI47_09560	0.79	-1.1
2,021,282	+		IAI47_09560	0.79	-1.8
2,021,282	+		IAI47_09560	0.79	+0.1
2,021,282	+		IAI47_09560	0.79	+0.9
2,021,282	+		IAI47_09560	0.79	+0.9
2,021,282	+		IAI47_09560	0.79	-0.9
2,021,282	+		IAI47_09560	0.79	-0.7
2,021,282	+		IAI47_09560	0.79	+0.3
2,021,283	-		IAI47_09560	0.79	-0.8
2,021,283	-		IAI47_09560	0.79	+1.5
2,021,283	-		IAI47_09560	0.79	-2.2
2,021,313	+		IAI47_09560	0.82	-2.8
2,021,361	+		IAI47_09560	0.87	-1.7
2,021,364	+		IAI47_09560	0.87	+0.9
2,021,364	+		IAI47_09560	0.87	-1.1
2,021,364	+		IAI47_09560	0.87	+0.5
2,021,364	+		IAI47_09560	0.87	+1.1
2,021,364	+		IAI47_09560	0.87	+0.5
2,021,364	+		IAI47_09560	0.87	-2.5
2,021,365	-		IAI47_09560	0.87	+0.0
2,021,365	-		IAI47_09560	0.87	+2.0
2,021,367	+		IAI47_09560	0.88	-0.8
2,021,367	+		IAI47_09560	0.88	+1.2
2,021,368	-		IAI47_09560	0.88	-1.3
2,021,368	-		IAI47_09560	0.88	-2.0
2,021,368	-		IAI47_09560	0.88	+2.6
2,021,466	+				-0.4
2,021,466	+				+0.6
2,021,466	+				+0.7
2,021,467	-				-3.0
2,021,467	-				-1.1
2,021,467	-				+2.5
2,021,485	-				+0.5
2,021,490	+				-1.5
2,021,543	+				-3.4
2,021,543	+				+1.5
2,021,543	+				+0.5
2,021,543	+				-1.8
2,021,543	+				-0.5
2,021,543	+				-1.8
2,021,543	+				-1.0
2,021,543	+				-0.8
2,021,544	-				+0.3
2,021,544	-				+0.9
2,021,544	-				-0.1
2,021,544	-				-2.1
2,021,544	-				+0.9
2,021,544	-				-0.6
2,021,544	-				+1.0
2,021,546	-				+0.5
2,021,553	+				-1.5
2,021,564	+				-0.7
2,021,564	+				-1.5
2,021,564	+				+1.5
2,021,575	-				-0.1
2,021,575	-				+0.6
2,021,575	-				+1.5
2,021,577	-				-1.7
2,021,616	+				+0.3
2,021,617	-				+1.1
2,021,617	-				+0.4
2,021,617	-				+1.3
2,021,617	-				-0.9
2,021,617	-				-0.5
2,021,617	-				-1.1
2,021,617	-				-1.6
2,021,617	-				-1.7
2,021,619	+				-2.4
2,021,619	+				-2.7
2,021,619	+				+0.0
2,021,639	+				+0.3
2,021,659	+				-1.7
2,021,659	+				+0.8
2,021,700	+				-0.0
2,021,700	+				+0.5
2,021,701	-				+1.5
2,021,734	-				-3.4
2,021,754	-				-0.8
2,021,773	-				-0.3
2,021,773	-				-1.8
2,021,773	-				+1.5
2,021,773	-				+0.7
2,021,786	+				-1.3
2,021,787	-				+1.7
2,021,787	-				+1.7
2,021,871	+				-0.7
2,021,881	-				+2.1
2,021,882	+				+0.4
2,021,882	+				+0.9
2,021,883	-				-0.2
2,021,883	-				+1.8
2,021,883	-				+1.8
2,021,911	-				+1.6
2,021,911	-				+1.3
2,021,912	+				-1.1
2,021,926	+				+2.1
2,021,942	-				-0.1
2,021,943	+				+0.9
2,021,943	+				-1.1
2,021,943	+				+1.2
2,021,943	+				+2.8
2,021,944	-				-1.2
2,021,947	+				-0.3
2,021,987	+				-1.5
2,021,988	-				-2.5
2,022,004	-				+0.4
2,022,023	+				-1.8
2,022,023	+				+2.0
2,022,023	+				-0.1
2,022,023	+				+0.1
2,022,024	-				-0.4
2,022,024	-				+1.8
2,022,024	-				+0.4
2,022,024	-				+2.3
2,022,024	-				-0.1
2,022,024	-				-1.1
2,022,028	+				+0.7
2,022,028	+				-0.8
2,022,028	+				+1.5
2,022,028	+				+1.8
2,022,028	+				-1.6
2,022,029	-				-2.2
2,022,029	-				+0.7
2,022,038	-				+0.1
2,022,101	+				+0.6
2,022,101	+				+0.3
2,022,101	+				-1.5
2,022,101	+				+1.7
2,022,101	+				-2.1
2,022,101	+				+0.4
2,022,102	-				+2.5
2,022,117	-				+0.7
2,022,144	-				+1.5
2,022,171	+				+1.2
2,022,171	+				+0.5
2,022,171	+				+0.1
2,022,171	+				+0.3
2,022,171	+				+1.2
2,022,171	+				+0.5
2,022,171	+				-2.6
2,022,171	+				-0.9
2,022,171	+				-1.8
2,022,171	+				-1.1
2,022,171	+				+0.6
2,022,171	+				-2.4
2,022,172	-				+0.2
2,022,172	-				+1.5
2,022,173	+				+1.8
2,022,173	+				-1.5
2,022,238	+		IAI47_09565	0.14	-2.2
2,022,281	+		IAI47_09565	0.17	+0.3
2,022,299	+		IAI47_09565	0.18	+1.0
2,022,300	-		IAI47_09565	0.18	+0.0
2,022,300	-		IAI47_09565	0.18	-0.2
2,022,300	-		IAI47_09565	0.18	-3.0
2,022,300	-		IAI47_09565	0.18	+0.4
2,022,439	-		IAI47_09565	0.27	+2.1
2,022,641	+		IAI47_09565	0.40	+0.4
2,022,642	-		IAI47_09565	0.40	-0.5
2,022,699	+		IAI47_09565	0.44	+2.2
2,022,700	-		IAI47_09565	0.44	-0.1
2,022,728	+		IAI47_09565	0.46	+0.3
2,022,729	-		IAI47_09565	0.46	+1.5
2,022,729	-		IAI47_09565	0.46	-1.3
2,022,729	-		IAI47_09565	0.46	-0.0
2,022,774	-		IAI47_09565	0.49	-0.5
2,023,002	+		IAI47_09565	0.64	-1.8
2,023,002	+		IAI47_09565	0.64	+1.6
2,023,003	-		IAI47_09565	0.64	+1.3
2,023,003	-		IAI47_09565	0.64	+0.2
2,023,081	+		IAI47_09565	0.69	+2.6
2,023,081	+		IAI47_09565	0.69	+0.1
2,023,088	-		IAI47_09565	0.69	+1.3
2,023,238	+		IAI47_09565	0.79	+0.5
2,023,238	+		IAI47_09565	0.79	-2.0
2,023,239	-		IAI47_09565	0.79	+1.1
2,023,239	-		IAI47_09565	0.79	-2.7
2,023,307	+		IAI47_09565	0.84	+0.5
2,023,308	-		IAI47_09565	0.84	-0.2
2,023,308	-		IAI47_09565	0.84	+0.6
2,023,338	+		IAI47_09565	0.86	+1.1
2,023,338	+		IAI47_09565	0.86	+0.1
2,023,339	-		IAI47_09565	0.86	+1.5
2,023,341	+		IAI47_09565	0.86	-1.0
2,023,341	+		IAI47_09565	0.86	-1.2
2,023,341	+		IAI47_09565	0.86	+0.5
2,023,341	+		IAI47_09565	0.86	+1.9
2,023,341	+		IAI47_09565	0.86	+1.9
2,023,341	+		IAI47_09565	0.86	-1.3
2,023,341	+		IAI47_09565	0.86	+0.6
2,023,341	+		IAI47_09565	0.86	+1.0
2,023,341	+		IAI47_09565	0.86	+1.8
2,023,342	-		IAI47_09565	0.86	-0.8
2,023,342	-		IAI47_09565	0.86	-0.5
2,023,342	-		IAI47_09565	0.86	-1.3
2,023,342	-		IAI47_09565	0.86	-0.1
2,023,342	-		IAI47_09565	0.86	+0.6
2,023,342	-		IAI47_09565	0.86	-1.1
2,023,342	-		IAI47_09565	0.86	-3.2
2,023,373	+		IAI47_09565	0.88	-0.5
2,023,373	+		IAI47_09565	0.88	+3.1
2,023,373	+		IAI47_09565	0.88	-0.8
2,023,374	-		IAI47_09565	0.88	+0.2
2,023,374	-		IAI47_09565	0.88	+1.2
2,023,463	+				-0.4
2,023,463	+				-1.1
2,023,464	-				-0.4
2,023,472	+				+0.9
2,023,472	+				+0.9
2,023,472	+				-3.5
2,023,473	-				-1.0
2,023,473	-				-1.1
2,023,499	+				-0.1
2,023,499	+				-0.5
2,023,499	+				+1.0
2,023,500	-				+2.5
2,023,500	-				+1.7
2,023,500	-				+0.8
2,023,500	-				-0.8
2,023,548	-				-2.2
2,023,548	-				+0.1
2,023,554	+				-1.3
2,023,555	-				+0.9
2,023,555	-				+0.2
2,023,574	-				+3.1
2,023,587	+				-0.1
2,023,587	+				-0.7
2,023,587	+				-1.3
2,023,587	+				+0.5
2,023,587	+				+1.4
2,023,587	+				-1.0
2,023,587	+				+1.0
2,023,588	-				+1.5
2,023,588	-				-1.0
2,023,588	-				+1.7
2,023,588	-				-0.4
2,023,588	-				-2.3
2,023,589	+				+0.9
2,023,589	+				-1.3
2,023,589	+				-0.0
2,023,589	+				-0.8
2,023,589	+				-0.6
2,023,589	+				-0.1
2,023,589	+				-0.4
2,023,590	-				-0.5
2,023,590	-				-0.2
2,023,590	-				+0.4
2,023,616	+				+1.0
2,023,616	+				-0.5
2,023,617	-				+0.7
2,023,617	-				-0.5
2,023,650	-				+1.3
2,023,661	+				-2.1
2,023,661	+				+0.9
2,023,662	-				+0.5
2,023,662	-				+1.3
2,023,724	+		IAI47_09570	0.12	-1.1
2,023,766	+		IAI47_09570	0.15	+0.4
2,023,875	+		IAI47_09570	0.23	-1.1
2,023,875	+		IAI47_09570	0.23	+0.5
2,023,875	+		IAI47_09570	0.23	-0.5
2,023,875	+		IAI47_09570	0.23	+3.1
2,023,875	+		IAI47_09570	0.23	+2.1
2,023,875	+		IAI47_09570	0.23	+1.5
2,023,875	+		IAI47_09570	0.23	+1.7
2,023,875	+		IAI47_09570	0.23	-1.7
2,023,875	+		IAI47_09570	0.23	+0.9
2,023,876	-		IAI47_09570	0.23	-0.5
2,023,876	-		IAI47_09570	0.23	-2.1
2,023,876	-		IAI47_09570	0.23	-0.8
2,023,876	-		IAI47_09570	0.23	-2.0
2,023,876	-		IAI47_09570	0.23	-2.1
2,023,876	-		IAI47_09570	0.23	+0.1
2,023,877	+		IAI47_09570	0.23	-1.2
2,023,878	-		IAI47_09570	0.23	+2.0
2,023,938	-		IAI47_09570	0.27	+1.2
2,024,096	+		IAI47_09570	0.39	+1.3
2,024,199	-		IAI47_09570	0.46	+0.5
2,024,229	+		IAI47_09570	0.48	-0.2
2,024,230	-		IAI47_09570	0.48	-0.8
2,024,328	+		IAI47_09570	0.55	+1.1
2,024,328	+		IAI47_09570	0.55	+0.9
2,024,328	+		IAI47_09570	0.55	-1.2
2,024,328	+		IAI47_09570	0.55	+0.5
2,024,328	+		IAI47_09570	0.55	-0.1
2,024,328	+		IAI47_09570	0.55	-1.1
2,024,328	+		IAI47_09570	0.55	-0.4
2,024,328	+		IAI47_09570	0.55	-0.4
2,024,328	+		IAI47_09570	0.55	+1.2
2,024,328	+		IAI47_09570	0.55	+0.2
2,024,329	-		IAI47_09570	0.55	+0.8
2,024,329	-		IAI47_09570	0.55	-1.5
2,024,329	-		IAI47_09570	0.55	+1.9
2,024,329	-		IAI47_09570	0.55	+0.5
2,024,329	-		IAI47_09570	0.55	-0.5
2,024,329	-		IAI47_09570	0.55	-0.0
2,024,329	-		IAI47_09570	0.55	+1.2
2,024,330	+		IAI47_09570	0.55	+0.9
2,024,330	+		IAI47_09570	0.55	+0.3
2,024,330	+		IAI47_09570	0.55	+1.0
2,024,331	-		IAI47_09570	0.56	+0.3
2,024,331	-		IAI47_09570	0.56	+0.5
2,024,331	-		IAI47_09570	0.56	+1.2
2,024,331	-		IAI47_09570	0.56	+3.5
2,024,331	-		IAI47_09570	0.56	+1.0
2,024,331	-		IAI47_09570	0.56	-0.4
2,024,339	+		IAI47_09570	0.56	-1.3
2,024,340	-		IAI47_09570	0.56	-1.3
2,024,340	-		IAI47_09570	0.56	+1.0
2,024,340	-		IAI47_09570	0.56	-0.2
2,024,340	-		IAI47_09570	0.56	+0.5
2,024,340	-		IAI47_09570	0.56	+2.7
2,024,469	-		IAI47_09570	0.65	-3.1
2,024,489	+		IAI47_09570	0.67	-0.1
2,024,489	+		IAI47_09570	0.67	-0.2
2,024,489	+		IAI47_09570	0.67	-0.1
2,024,489	+		IAI47_09570	0.67	+1.7
2,024,489	+		IAI47_09570	0.67	+1.4
2,024,489	+		IAI47_09570	0.67	+0.3
2,024,490	-		IAI47_09570	0.67	+0.6
2,024,490	-		IAI47_09570	0.67	+1.5
2,024,490	-		IAI47_09570	0.67	-0.4
2,024,490	-		IAI47_09570	0.67	+1.2
2,024,493	-		IAI47_09570	0.67	+0.2
2,024,493	-		IAI47_09570	0.67	+0.6
2,024,502	+		IAI47_09570	0.68	+0.2