Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23930 and BWI76_RS23935 are separated by 198 nucleotides BWI76_RS23935 and BWI76_RS23940 overlap by 8 nucleotides BWI76_RS23940 and BWI76_RS23945 are separated by 10 nucleotides
BWI76_RS23930: BWI76_RS23930 - transcriptional regulator ArgP, at 4,993,855 to 4,994,748
_RS23930
BWI76_RS23935: BWI76_RS23935 - methylmalonyl-CoA mutase, at 4,994,947 to 4,997,091
_RS23935
BWI76_RS23940: BWI76_RS23940 - ATPase/protein kinase, at 4,997,084 to 4,998,079
_RS23940
BWI76_RS23945: BWI76_RS23945 - methylmalonyl-CoA decarboxylase, at 4,998,090 to 4,998,875
_RS23945
Position (kb)
4994
4995
4996
4997
4998 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4994.015 kb on + strand, within BWI76_RS23930 at 4994.269 kb on + strand, within BWI76_RS23930 at 4994.288 kb on + strand, within BWI76_RS23930 at 4994.357 kb on + strand, within BWI76_RS23930 at 4994.402 kb on + strand, within BWI76_RS23930 at 4994.750 kb on - strand at 4995.167 kb on - strand, within BWI76_RS23935 at 4995.167 kb on - strand, within BWI76_RS23935 at 4995.167 kb on - strand, within BWI76_RS23935 at 4995.167 kb on - strand, within BWI76_RS23935 at 4995.212 kb on - strand, within BWI76_RS23935 at 4995.259 kb on + strand, within BWI76_RS23935 at 4995.419 kb on + strand, within BWI76_RS23935 at 4995.476 kb on + strand, within BWI76_RS23935 at 4995.525 kb on + strand, within BWI76_RS23935 at 4995.631 kb on - strand, within BWI76_RS23935 at 4995.668 kb on - strand, within BWI76_RS23935 at 4995.763 kb on - strand, within BWI76_RS23935 at 4995.804 kb on - strand, within BWI76_RS23935 at 4996.117 kb on - strand, within BWI76_RS23935 at 4996.176 kb on + strand, within BWI76_RS23935 at 4996.298 kb on - strand, within BWI76_RS23935 at 4996.367 kb on + strand, within BWI76_RS23935 at 4996.375 kb on - strand, within BWI76_RS23935 at 4996.454 kb on + strand, within BWI76_RS23935 at 4996.528 kb on - strand, within BWI76_RS23935 at 4996.587 kb on + strand, within BWI76_RS23935 at 4996.781 kb on + strand, within BWI76_RS23935 at 4996.795 kb on - strand, within BWI76_RS23935 at 4996.909 kb on - strand at 4997.038 kb on + strand at 4997.148 kb on - strand at 4997.426 kb on + strand, within BWI76_RS23940 at 4997.519 kb on + strand, within BWI76_RS23940 at 4997.519 kb on + strand, within BWI76_RS23940 at 4997.701 kb on - strand, within BWI76_RS23940 at 4997.701 kb on - strand, within BWI76_RS23940 at 4997.947 kb on + strand, within BWI76_RS23940
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 4,994,015 + BWI76_RS23930 0.18 -2.5 4,994,269 + BWI76_RS23930 0.46 -1.2 4,994,288 + BWI76_RS23930 0.48 -1.8 4,994,357 + BWI76_RS23930 0.56 -0.7 4,994,402 + BWI76_RS23930 0.61 -0.9 4,994,750 - -2.5 4,995,167 - BWI76_RS23935 0.10 -0.2 4,995,167 - BWI76_RS23935 0.10 +0.2 4,995,167 - BWI76_RS23935 0.10 +0.4 4,995,167 - BWI76_RS23935 0.10 +0.0 4,995,212 - BWI76_RS23935 0.12 -0.3 4,995,259 + BWI76_RS23935 0.15 -0.5 4,995,419 + BWI76_RS23935 0.22 +0.8 4,995,476 + BWI76_RS23935 0.25 +0.6 4,995,525 + BWI76_RS23935 0.27 +3.2 4,995,631 - BWI76_RS23935 0.32 -0.1 4,995,668 - BWI76_RS23935 0.34 -0.4 4,995,763 - BWI76_RS23935 0.38 +0.1 4,995,804 - BWI76_RS23935 0.40 +1.1 4,996,117 - BWI76_RS23935 0.55 -0.6 4,996,176 + BWI76_RS23935 0.57 +0.9 4,996,298 - BWI76_RS23935 0.63 +0.8 4,996,367 + BWI76_RS23935 0.66 -0.3 4,996,375 - BWI76_RS23935 0.67 +0.7 4,996,454 + BWI76_RS23935 0.70 -0.7 4,996,528 - BWI76_RS23935 0.74 -0.3 4,996,587 + BWI76_RS23935 0.76 -0.1 4,996,781 + BWI76_RS23935 0.86 -2.1 4,996,795 - BWI76_RS23935 0.86 +0.5 4,996,909 - +1.5 4,997,038 + -1.2 4,997,148 - -0.6 4,997,426 + BWI76_RS23940 0.34 +0.0 4,997,519 + BWI76_RS23940 0.44 +0.3 4,997,519 + BWI76_RS23940 0.44 +0.4 4,997,701 - BWI76_RS23940 0.62 -0.2 4,997,701 - BWI76_RS23940 0.62 -1.1 4,997,947 + BWI76_RS23940 0.87 +1.1
Or see this region's nucleotide sequence