Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22735 and BWI76_RS22740 are separated by 14 nucleotides BWI76_RS22740 and BWI76_RS22745 overlap by 4 nucleotides BWI76_RS22745 and BWI76_RS22750 are separated by 11 nucleotides
BWI76_RS22735: BWI76_RS22735 - type I-E CRISPR-associated protein Cas7/Cse4/CasC, at 4,737,105 to 4,738,163
_RS22735
BWI76_RS22740: BWI76_RS22740 - type I-E CRISPR-associated protein Cse2/CasB, at 4,738,178 to 4,738,729
_RS22740
BWI76_RS22745: BWI76_RS22745 - type I-E CRISPR-associated protein Cse1/CasA, at 4,738,726 to 4,740,285
_RS22745
BWI76_RS22750: BWI76_RS22750 - CRISPR-associated helicase/endonuclease Cas3, at 4,740,297 to 4,742,957
_RS22750
Position (kb)
4738
4739
4740
4741 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4737.806 kb on - strand, within BWI76_RS22735 at 4737.956 kb on + strand, within BWI76_RS22735 at 4738.074 kb on - strand at 4738.243 kb on - strand, within BWI76_RS22740 at 4738.264 kb on + strand, within BWI76_RS22740 at 4738.359 kb on + strand, within BWI76_RS22740 at 4738.359 kb on + strand, within BWI76_RS22740 at 4738.367 kb on - strand, within BWI76_RS22740 at 4738.367 kb on - strand, within BWI76_RS22740 at 4738.431 kb on - strand, within BWI76_RS22740 at 4738.494 kb on + strand, within BWI76_RS22740 at 4738.549 kb on + strand, within BWI76_RS22740 at 4738.701 kb on + strand at 4738.704 kb on - strand at 4738.846 kb on - strand at 4738.853 kb on + strand at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.159 kb on - strand, within BWI76_RS22745 at 4739.431 kb on - strand, within BWI76_RS22745 at 4739.490 kb on - strand, within BWI76_RS22745 at 4739.540 kb on - strand, within BWI76_RS22745 at 4739.550 kb on - strand, within BWI76_RS22745 at 4739.585 kb on + strand, within BWI76_RS22745 at 4739.593 kb on - strand, within BWI76_RS22745 at 4739.593 kb on - strand, within BWI76_RS22745 at 4739.598 kb on - strand, within BWI76_RS22745 at 4739.641 kb on - strand, within BWI76_RS22745 at 4739.663 kb on + strand, within BWI76_RS22745 at 4739.671 kb on - strand, within BWI76_RS22745 at 4739.763 kb on - strand, within BWI76_RS22745 at 4739.795 kb on - strand, within BWI76_RS22745 at 4739.806 kb on - strand, within BWI76_RS22745 at 4739.913 kb on + strand, within BWI76_RS22745 at 4740.056 kb on - strand, within BWI76_RS22745 at 4740.056 kb on - strand, within BWI76_RS22745 at 4740.056 kb on - strand, within BWI76_RS22745 at 4740.115 kb on - strand, within BWI76_RS22745 at 4740.127 kb on - strand, within BWI76_RS22745 at 4740.151 kb on + strand at 4740.159 kb on - strand at 4740.416 kb on - strand at 4740.476 kb on - strand at 4740.476 kb on - strand at 4740.476 kb on - strand at 4740.509 kb on + strand at 4740.509 kb on + strand at 4740.523 kb on + strand at 4740.617 kb on + strand, within BWI76_RS22750 at 4740.814 kb on - strand, within BWI76_RS22750 at 4740.858 kb on + strand, within BWI76_RS22750 at 4740.918 kb on + strand, within BWI76_RS22750 at 4741.093 kb on - strand, within BWI76_RS22750 at 4741.096 kb on + strand, within BWI76_RS22750 at 4741.103 kb on - strand at 4741.220 kb on + strand, within BWI76_RS22750 at 4741.220 kb on + strand, within BWI76_RS22750 at 4741.220 kb on + strand, within BWI76_RS22750 at 4741.226 kb on - strand, within BWI76_RS22750 at 4741.228 kb on - strand, within BWI76_RS22750 at 4741.228 kb on - strand, within BWI76_RS22750 at 4741.233 kb on + strand, within BWI76_RS22750 at 4741.241 kb on - strand, within BWI76_RS22750
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 4,737,806 - BWI76_RS22735 0.66 -0.1 4,737,956 + BWI76_RS22735 0.80 +0.2 4,738,074 - -0.0 4,738,243 - BWI76_RS22740 0.12 -0.3 4,738,264 + BWI76_RS22740 0.16 -0.4 4,738,359 + BWI76_RS22740 0.33 +0.8 4,738,359 + BWI76_RS22740 0.33 -0.2 4,738,367 - BWI76_RS22740 0.34 +0.2 4,738,367 - BWI76_RS22740 0.34 +0.0 4,738,431 - BWI76_RS22740 0.46 -0.4 4,738,494 + BWI76_RS22740 0.57 +0.0 4,738,549 + BWI76_RS22740 0.67 +0.9 4,738,701 + +0.3 4,738,704 - -0.9 4,738,846 - -0.2 4,738,853 + -0.2 4,739,070 + BWI76_RS22745 0.22 -0.4 4,739,070 + BWI76_RS22745 0.22 -0.6 4,739,070 + BWI76_RS22745 0.22 +0.1 4,739,070 + +0.7 4,739,070 + BWI76_RS22745 0.22 -2.1 4,739,070 + BWI76_RS22745 0.22 -0.1 4,739,070 + BWI76_RS22745 0.22 -2.1 4,739,078 - BWI76_RS22745 0.23 +0.1 4,739,078 - BWI76_RS22745 0.23 -0.2 4,739,078 - +1.7 4,739,078 - BWI76_RS22745 0.23 -0.8 4,739,078 - BWI76_RS22745 0.23 -0.1 4,739,159 - BWI76_RS22745 0.28 +0.1 4,739,431 - BWI76_RS22745 0.45 -0.5 4,739,490 - BWI76_RS22745 0.49 -0.9 4,739,540 - BWI76_RS22745 0.52 +0.4 4,739,550 - BWI76_RS22745 0.53 -0.4 4,739,585 + BWI76_RS22745 0.55 -0.3 4,739,593 - BWI76_RS22745 0.56 -0.8 4,739,593 - BWI76_RS22745 0.56 -1.5 4,739,598 - BWI76_RS22745 0.56 -0.8 4,739,641 - BWI76_RS22745 0.59 -1.5 4,739,663 + BWI76_RS22745 0.60 +0.5 4,739,671 - BWI76_RS22745 0.61 +0.7 4,739,763 - BWI76_RS22745 0.66 +0.1 4,739,795 - BWI76_RS22745 0.69 +0.5 4,739,806 - BWI76_RS22745 0.69 +0.7 4,739,913 + BWI76_RS22745 0.76 +0.4 4,740,056 - BWI76_RS22745 0.85 -1.1 4,740,056 - BWI76_RS22745 0.85 -0.9 4,740,056 - BWI76_RS22745 0.85 -0.2 4,740,115 - BWI76_RS22745 0.89 -0.6 4,740,127 - BWI76_RS22745 0.90 -0.3 4,740,151 + -0.1 4,740,159 - +2.1 4,740,416 - -0.8 4,740,476 - -0.1 4,740,476 - -2.8 4,740,476 - -0.1 4,740,509 + +0.2 4,740,509 + -0.1 4,740,523 + +0.6 4,740,617 + BWI76_RS22750 0.12 -3.5 4,740,814 - BWI76_RS22750 0.19 -0.2 4,740,858 + BWI76_RS22750 0.21 +0.9 4,740,918 + BWI76_RS22750 0.23 +0.4 4,741,093 - BWI76_RS22750 0.30 -0.3 4,741,096 + BWI76_RS22750 0.30 +1.0 4,741,103 - +0.7 4,741,220 + BWI76_RS22750 0.35 -0.8 4,741,220 + BWI76_RS22750 0.35 -0.2 4,741,220 + BWI76_RS22750 0.35 +0.5 4,741,226 - BWI76_RS22750 0.35 +0.1 4,741,228 - BWI76_RS22750 0.35 +0.9 4,741,228 - BWI76_RS22750 0.35 +0.8 4,741,233 + BWI76_RS22750 0.35 +0.9 4,741,241 - BWI76_RS22750 0.35 -1.2
Or see this region's nucleotide sequence