Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14910

Experiment: L-Sorbose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14905 and BWI76_RS14910 are separated by 119 nucleotidesBWI76_RS14910 and BWI76_RS14915 are separated by 890 nucleotides BWI76_RS14905: BWI76_RS14905 - hypothetical protein, at 3,123,111 to 3,124,373 _RS14905 BWI76_RS14910: BWI76_RS14910 - phosphoporin PhoE, at 3,124,493 to 3,125,578 _RS14910 BWI76_RS14915: BWI76_RS14915 - hypothetical protein, at 3,126,469 to 3,126,975 _RS14915 Position (kb) 3124 3125 3126Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3123.502 kb on + strand, within BWI76_RS14905at 3123.518 kb on - strand, within BWI76_RS14905at 3123.530 kb on - strand, within BWI76_RS14905at 3123.544 kb on - strand, within BWI76_RS14905at 3123.596 kb on - strand, within BWI76_RS14905at 3123.632 kb on - strand, within BWI76_RS14905at 3123.632 kb on - strand, within BWI76_RS14905at 3123.655 kb on + strand, within BWI76_RS14905at 3123.655 kb on + strand, within BWI76_RS14905at 3123.655 kb on + strand, within BWI76_RS14905at 3123.655 kb on + strand, within BWI76_RS14905at 3123.655 kb on - strandat 3123.660 kb on + strand, within BWI76_RS14905at 3123.689 kb on + strand, within BWI76_RS14905at 3123.780 kb on + strand, within BWI76_RS14905at 3123.780 kb on + strand, within BWI76_RS14905at 3123.780 kb on + strandat 3123.920 kb on - strand, within BWI76_RS14905at 3124.001 kb on + strand, within BWI76_RS14905at 3124.001 kb on + strand, within BWI76_RS14905at 3124.001 kb on + strand, within BWI76_RS14905at 3124.001 kb on + strand, within BWI76_RS14905at 3124.009 kb on - strand, within BWI76_RS14905at 3124.009 kb on - strand, within BWI76_RS14905at 3124.143 kb on - strand, within BWI76_RS14905at 3124.186 kb on + strandat 3124.187 kb on + strand, within BWI76_RS14905at 3124.234 kb on + strand, within BWI76_RS14905at 3124.242 kb on - strand, within BWI76_RS14905at 3124.242 kb on - strand, within BWI76_RS14905at 3124.242 kb on - strand, within BWI76_RS14905at 3124.242 kb on - strand, within BWI76_RS14905at 3124.491 kb on + strandat 3124.514 kb on - strandat 3124.627 kb on - strand, within BWI76_RS14910at 3124.742 kb on + strand, within BWI76_RS14910at 3124.755 kb on - strand, within BWI76_RS14910at 3124.760 kb on - strand, within BWI76_RS14910at 3124.839 kb on - strand, within BWI76_RS14910at 3124.920 kb on + strand, within BWI76_RS14910at 3124.928 kb on - strand, within BWI76_RS14910at 3124.997 kb on + strand, within BWI76_RS14910at 3125.005 kb on - strandat 3125.005 kb on - strand, within BWI76_RS14910at 3125.073 kb on - strand, within BWI76_RS14910at 3125.381 kb on - strand, within BWI76_RS14910at 3125.414 kb on + strand, within BWI76_RS14910at 3125.422 kb on - strand, within BWI76_RS14910at 3125.428 kb on + strand, within BWI76_RS14910at 3125.435 kb on - strand, within BWI76_RS14910at 3125.447 kb on + strand, within BWI76_RS14910at 3125.448 kb on + strand, within BWI76_RS14910at 3125.450 kb on - strand, within BWI76_RS14910at 3125.456 kb on - strand, within BWI76_RS14910at 3125.509 kb on + strandat 3125.509 kb on - strandat 3125.509 kb on - strandat 3125.509 kb on - strandat 3125.509 kb on - strandat 3125.517 kb on - strandat 3125.517 kb on - strandat 3125.517 kb on - strandat 3125.524 kb on + strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.632 kb on - strandat 3125.632 kb on - strandat 3125.632 kb on - strandat 3125.636 kb on + strandat 3125.644 kb on - strandat 3125.644 kb on - strandat 3125.788 kb on - strandat 3126.058 kb on + strandat 3126.101 kb on + strandat 3126.104 kb on + strandat 3126.134 kb on + strandat 3126.155 kb on + strandat 3126.166 kb on + strandat 3126.166 kb on + strandat 3126.173 kb on + strandat 3126.173 kb on + strandat 3126.173 kb on + strandat 3126.190 kb on + strandat 3126.201 kb on + strandat 3126.229 kb on + strandat 3126.239 kb on + strandat 3126.244 kb on + strandat 3126.247 kb on + strandat 3126.255 kb on - strandat 3126.271 kb on + strandat 3126.271 kb on + strandat 3126.279 kb on - strandat 3126.279 kb on - strandat 3126.279 kb on - strandat 3126.279 kb on - strandat 3126.332 kb on + strandat 3126.334 kb on - strandat 3126.337 kb on + strandat 3126.337 kb on + strandat 3126.342 kb on + strandat 3126.344 kb on + strandat 3126.351 kb on + strandat 3126.352 kb on - strandat 3126.367 kb on + strandat 3126.456 kb on - strandat 3126.456 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Sorbose (C)
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3,123,502 + BWI76_RS14905 0.31 -1.4
3,123,518 - BWI76_RS14905 0.32 -0.4
3,123,530 - BWI76_RS14905 0.33 -0.7
3,123,544 - BWI76_RS14905 0.34 +0.6
3,123,596 - BWI76_RS14905 0.38 -0.5
3,123,632 - BWI76_RS14905 0.41 +0.6
3,123,632 - BWI76_RS14905 0.41 -2.6
3,123,655 + BWI76_RS14905 0.43 +0.3
3,123,655 + BWI76_RS14905 0.43 +0.5
3,123,655 + BWI76_RS14905 0.43 -0.8
3,123,655 + BWI76_RS14905 0.43 +1.2
3,123,655 - +0.7
3,123,660 + BWI76_RS14905 0.43 -0.6
3,123,689 + BWI76_RS14905 0.46 -1.3
3,123,780 + BWI76_RS14905 0.53 +0.7
3,123,780 + BWI76_RS14905 0.53 -1.2
3,123,780 + +0.3
3,123,920 - BWI76_RS14905 0.64 -0.4
3,124,001 + BWI76_RS14905 0.70 +0.6
3,124,001 + BWI76_RS14905 0.70 +0.5
3,124,001 + BWI76_RS14905 0.70 +0.4
3,124,001 + BWI76_RS14905 0.70 +1.0
3,124,009 - BWI76_RS14905 0.71 +1.0
3,124,009 - BWI76_RS14905 0.71 +0.1
3,124,143 - BWI76_RS14905 0.82 -1.8
3,124,186 + -1.5
3,124,187 + BWI76_RS14905 0.85 -0.4
3,124,234 + BWI76_RS14905 0.89 -0.2
3,124,242 - BWI76_RS14905 0.90 -0.2
3,124,242 - BWI76_RS14905 0.90 -0.7
3,124,242 - BWI76_RS14905 0.90 -0.7
3,124,242 - BWI76_RS14905 0.90 +0.2
3,124,491 + -0.1
3,124,514 - -0.3
3,124,627 - BWI76_RS14910 0.12 +1.1
3,124,742 + BWI76_RS14910 0.23 -0.4
3,124,755 - BWI76_RS14910 0.24 +0.6
3,124,760 - BWI76_RS14910 0.25 +0.6
3,124,839 - BWI76_RS14910 0.32 -1.4
3,124,920 + BWI76_RS14910 0.39 +0.1
3,124,928 - BWI76_RS14910 0.40 -0.5
3,124,997 + BWI76_RS14910 0.46 +0.4
3,125,005 - -1.7
3,125,005 - BWI76_RS14910 0.47 +0.5
3,125,073 - BWI76_RS14910 0.53 +1.0
3,125,381 - BWI76_RS14910 0.82 +1.3
3,125,414 + BWI76_RS14910 0.85 -0.2
3,125,422 - BWI76_RS14910 0.86 +0.2
3,125,428 + BWI76_RS14910 0.86 -1.4
3,125,435 - BWI76_RS14910 0.87 +0.0
3,125,447 + BWI76_RS14910 0.88 +0.9
3,125,448 + BWI76_RS14910 0.88 +1.2
3,125,450 - BWI76_RS14910 0.88 +1.3
3,125,456 - BWI76_RS14910 0.89 +0.9
3,125,509 + +2.3
3,125,509 - -0.5
3,125,509 - -0.2
3,125,509 - +0.0
3,125,509 - +0.0
3,125,517 - -1.4
3,125,517 - -1.0
3,125,517 - +0.6
3,125,524 + -0.3
3,125,550 - -1.5
3,125,550 - +0.2
3,125,550 - -0.1
3,125,550 - -0.7
3,125,550 - +0.9
3,125,550 - +0.1
3,125,550 - -0.0
3,125,550 - -1.5
3,125,632 - +0.3
3,125,632 - -0.3
3,125,632 - +1.3
3,125,636 + -0.2
3,125,644 - +0.2
3,125,644 - +0.5
3,125,788 - -1.1
3,126,058 + +0.6
3,126,101 + +0.1
3,126,104 + -0.2
3,126,134 + +0.2
3,126,155 + -0.2
3,126,166 + -0.0
3,126,166 + -0.4
3,126,173 + -0.2
3,126,173 + -1.2
3,126,173 + -0.0
3,126,190 + +0.0
3,126,201 + +0.4
3,126,229 + -1.5
3,126,239 + -0.2
3,126,244 + +0.2
3,126,247 + -0.4
3,126,255 - +0.3
3,126,271 + -0.3
3,126,271 + +2.9
3,126,279 - -0.3
3,126,279 - -0.9
3,126,279 - -0.7
3,126,279 - -0.2
3,126,332 + +0.9
3,126,334 - -0.3
3,126,337 + +1.5
3,126,337 + +0.3
3,126,342 + -0.4
3,126,344 + -1.3
3,126,351 + -0.2
3,126,352 - -1.5
3,126,367 + -0.4
3,126,456 - -0.2
3,126,456 - +0.0

Or see this region's nucleotide sequence