Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09695 and BWI76_RS09700 are separated by 42 nucleotides BWI76_RS09700 and BWI76_RS09705 are separated by 42 nucleotides BWI76_RS09705 and BWI76_RS09710 overlap by 1 nucleotides BWI76_RS09710 and BWI76_RS09715 are separated by 12 nucleotides
BWI76_RS09695: BWI76_RS09695 - MFS transporter, at 2,032,899 to 2,034,047
_RS09695
BWI76_RS09700: BWI76_RS09700 - PTS IIA-like nitrogen-regulatory protein PtsN, at 2,034,090 to 2,034,527
_RS09700
BWI76_RS09705: BWI76_RS09705 - transketolase, at 2,034,570 to 2,035,481
_RS09705
BWI76_RS09710: BWI76_RS09710 - transketolase, at 2,035,481 to 2,036,278
_RS09710
BWI76_RS09715: BWI76_RS09715 - hypothetical protein, at 2,036,291 to 2,037,556
_RS09715
Position (kb)
2034
2035
2036 Strain fitness (log2 ratio)
-2
-1
0
1 at 2033.644 kb on + strand, within BWI76_RS09695 at 2033.706 kb on + strand, within BWI76_RS09695 at 2033.714 kb on - strand, within BWI76_RS09695 at 2033.887 kb on + strand, within BWI76_RS09695 at 2034.049 kb on - strand at 2034.370 kb on - strand, within BWI76_RS09700 at 2034.588 kb on - strand at 2034.588 kb on - strand at 2034.774 kb on + strand, within BWI76_RS09705 at 2035.011 kb on + strand, within BWI76_RS09705 at 2035.019 kb on - strand, within BWI76_RS09705 at 2035.019 kb on - strand, within BWI76_RS09705 at 2035.080 kb on + strand, within BWI76_RS09705 at 2035.382 kb on + strand, within BWI76_RS09705 at 2035.448 kb on + strand at 2035.605 kb on + strand, within BWI76_RS09710 at 2035.965 kb on + strand, within BWI76_RS09710 at 2036.065 kb on + strand, within BWI76_RS09710 at 2036.263 kb on - strand at 2036.407 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 2,033,644 + BWI76_RS09695 0.65 +0.0 2,033,706 + BWI76_RS09695 0.70 +1.1 2,033,714 - BWI76_RS09695 0.71 -0.0 2,033,887 + BWI76_RS09695 0.86 -0.5 2,034,049 - -0.8 2,034,370 - BWI76_RS09700 0.64 -0.2 2,034,588 - +0.7 2,034,588 - +0.2 2,034,774 + BWI76_RS09705 0.22 -1.1 2,035,011 + BWI76_RS09705 0.48 -1.1 2,035,019 - BWI76_RS09705 0.49 -1.6 2,035,019 - BWI76_RS09705 0.49 +0.2 2,035,080 + BWI76_RS09705 0.56 -0.5 2,035,382 + BWI76_RS09705 0.89 -1.8 2,035,448 + +0.1 2,035,605 + BWI76_RS09710 0.16 -0.2 2,035,965 + BWI76_RS09710 0.61 -0.9 2,036,065 + BWI76_RS09710 0.73 +0.4 2,036,263 - +0.1 2,036,407 + -1.2
Or see this region's nucleotide sequence