Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06055 and BWI76_RS06060 overlap by 1 nucleotides BWI76_RS06060 and BWI76_RS06065 are separated by 252 nucleotides BWI76_RS06065 and BWI76_RS06070 are separated by 11 nucleotides BWI76_RS06070 and BWI76_RS06075 overlap by 4 nucleotides
BWI76_RS06055: BWI76_RS06055 - MASE1 sensor histidine kinase, at 1,272,475 to 1,274,016
_RS06055
BWI76_RS06060: BWI76_RS06060 - DNA-binding response regulator, at 1,274,016 to 1,274,645
_RS06060
BWI76_RS06065: BWI76_RS06065 - taurine ABC transporter substrate-binding protein, at 1,274,898 to 1,275,860
_RS06065
BWI76_RS06070: BWI76_RS06070 - taurine transporter ATP-binding subunit, at 1,275,872 to 1,276,639
_RS06070
BWI76_RS06075: BWI76_RS06075 - taurine transporter subunit, at 1,276,636 to 1,277,463
_RS06075
Position (kb)
1274
1275
1276 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1273.961 kb on + strand at 1274.161 kb on - strand, within BWI76_RS06060 at 1274.461 kb on - strand, within BWI76_RS06060 at 1274.487 kb on - strand, within BWI76_RS06060 at 1274.529 kb on + strand, within BWI76_RS06060 at 1274.550 kb on - strand, within BWI76_RS06060 at 1274.990 kb on - strand at 1275.225 kb on + strand, within BWI76_RS06065 at 1275.266 kb on + strand, within BWI76_RS06065 at 1275.302 kb on - strand, within BWI76_RS06065 at 1275.326 kb on - strand, within BWI76_RS06065 at 1275.355 kb on + strand, within BWI76_RS06065 at 1275.462 kb on + strand, within BWI76_RS06065 at 1275.507 kb on - strand, within BWI76_RS06065 at 1275.512 kb on + strand, within BWI76_RS06065 at 1275.767 kb on + strand at 1276.057 kb on - strand, within BWI76_RS06070 at 1276.071 kb on - strand, within BWI76_RS06070 at 1276.071 kb on - strand, within BWI76_RS06070 at 1276.143 kb on - strand, within BWI76_RS06070 at 1276.221 kb on + strand, within BWI76_RS06070 at 1276.606 kb on - strand at 1276.708 kb on + strand at 1276.735 kb on + strand, within BWI76_RS06075
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 1,273,961 + -0.6 1,274,161 - BWI76_RS06060 0.23 -0.7 1,274,461 - BWI76_RS06060 0.71 -0.6 1,274,487 - BWI76_RS06060 0.75 -0.7 1,274,529 + BWI76_RS06060 0.81 +0.4 1,274,550 - BWI76_RS06060 0.85 +0.7 1,274,990 - +0.5 1,275,225 + BWI76_RS06065 0.34 -0.0 1,275,266 + BWI76_RS06065 0.38 +0.3 1,275,302 - BWI76_RS06065 0.42 -0.0 1,275,326 - BWI76_RS06065 0.44 +0.4 1,275,355 + BWI76_RS06065 0.47 +0.2 1,275,462 + BWI76_RS06065 0.59 +1.5 1,275,507 - BWI76_RS06065 0.63 +0.3 1,275,512 + BWI76_RS06065 0.64 +1.9 1,275,767 + -1.8 1,276,057 - BWI76_RS06070 0.24 -0.8 1,276,071 - BWI76_RS06070 0.26 +0.3 1,276,071 - BWI76_RS06070 0.26 -0.1 1,276,143 - BWI76_RS06070 0.35 -0.3 1,276,221 + BWI76_RS06070 0.45 +1.7 1,276,606 - -0.7 1,276,708 + +0.1 1,276,735 + BWI76_RS06075 0.12 +0.0
Or see this region's nucleotide sequence