Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02810 and BWI76_RS02815 are separated by 44 nucleotides BWI76_RS02815 and BWI76_RS02820 are separated by 175 nucleotides
BWI76_RS02810: BWI76_RS02810 - sugar ABC transporter permease YjfF, at 573,817 to 574,803
_RS02810
BWI76_RS02815: BWI76_RS02815 - fructose-bisphosphatase class I, at 574,848 to 575,846
_RS02815
BWI76_RS02820: BWI76_RS02820 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 576,022 to 577,395
_RS02820
Position (kb) 574
575
576 Strain fitness (log2 ratio) -2
-1
0
1
2 at 573.881 kb on - strand at 574.280 kb on - strand, within BWI76_RS02810 at 574.280 kb on - strand, within BWI76_RS02810 at 574.549 kb on - strand, within BWI76_RS02810 at 574.598 kb on + strand, within BWI76_RS02810 at 574.690 kb on - strand, within BWI76_RS02810 at 574.892 kb on - strand at 575.069 kb on + strand, within BWI76_RS02815 at 575.351 kb on - strand, within BWI76_RS02815 at 575.631 kb on - strand, within BWI76_RS02815 at 575.769 kb on + strand at 575.865 kb on - strand at 575.922 kb on + strand at 575.928 kb on - strand at 575.979 kb on + strand at 576.100 kb on - strand at 576.100 kb on - strand at 576.128 kb on - strand at 576.546 kb on + strand, within BWI76_RS02820 at 576.731 kb on + strand, within BWI76_RS02820 at 576.739 kb on - strand, within BWI76_RS02820 at 576.792 kb on + strand, within BWI76_RS02820
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 573,881 - +0.2 574,280 - BWI76_RS02810 0.47 +2.2 574,280 - BWI76_RS02810 0.47 +1.0 574,549 - BWI76_RS02810 0.74 +0.4 574,598 + BWI76_RS02810 0.79 -0.5 574,690 - BWI76_RS02810 0.88 -1.4 574,892 - -0.2 575,069 + BWI76_RS02815 0.22 -0.6 575,351 - BWI76_RS02815 0.50 -1.9 575,631 - BWI76_RS02815 0.78 -0.6 575,769 + -0.3 575,865 - -0.7 575,922 + -0.1 575,928 - -0.3 575,979 + +0.4 576,100 - +1.4 576,100 - -0.1 576,128 - +0.7 576,546 + BWI76_RS02820 0.38 -0.3 576,731 + BWI76_RS02820 0.52 +0.3 576,739 - BWI76_RS02820 0.52 -1.9 576,792 + BWI76_RS02820 0.56 +0.7
Or see this region's nucleotide sequence