Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18995 and AO353_19000 overlap by 1 nucleotides AO353_19000 and AO353_19005 are separated by 10 nucleotides AO353_19005 and AO353_19010 are separated by 58 nucleotides
AO353_18995: AO353_18995 - ABC transporter permease, at 4,172,633 to 4,175,137
_18995
AO353_19000: AO353_19000 - ABC transporter, at 4,175,137 to 4,175,823
_19000
AO353_19005: AO353_19005 - esterase, at 4,175,834 to 4,176,439
_19005
AO353_19010: AO353_19010 - hypothetical protein, at 4,176,498 to 4,176,791
_19010
Position (kb)
4175
4176 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4174.193 kb on + strand, within AO353_18995 at 4174.193 kb on + strand, within AO353_18995 at 4174.194 kb on - strand, within AO353_18995 at 4174.205 kb on + strand, within AO353_18995 at 4174.205 kb on + strand, within AO353_18995 at 4174.205 kb on + strand, within AO353_18995 at 4174.205 kb on + strand, within AO353_18995 at 4174.206 kb on - strand, within AO353_18995 at 4174.206 kb on - strand, within AO353_18995 at 4174.206 kb on - strand, within AO353_18995 at 4174.356 kb on + strand, within AO353_18995 at 4174.356 kb on + strand at 4174.356 kb on + strand, within AO353_18995 at 4174.357 kb on - strand, within AO353_18995 at 4174.357 kb on - strand, within AO353_18995 at 4174.500 kb on + strand, within AO353_18995 at 4174.500 kb on + strand, within AO353_18995 at 4174.500 kb on + strand, within AO353_18995 at 4174.501 kb on - strand, within AO353_18995 at 4174.501 kb on - strand, within AO353_18995 at 4174.581 kb on + strand, within AO353_18995 at 4174.582 kb on - strand, within AO353_18995 at 4174.608 kb on + strand, within AO353_18995 at 4174.608 kb on + strand, within AO353_18995 at 4174.608 kb on + strand at 4174.608 kb on + strand, within AO353_18995 at 4174.608 kb on + strand, within AO353_18995 at 4174.608 kb on + strand, within AO353_18995 at 4174.609 kb on - strand, within AO353_18995 at 4174.609 kb on - strand, within AO353_18995 at 4174.609 kb on - strand, within AO353_18995 at 4174.609 kb on - strand, within AO353_18995 at 4174.781 kb on + strand, within AO353_18995 at 4174.788 kb on + strand, within AO353_18995 at 4174.788 kb on + strand, within AO353_18995 at 4174.789 kb on - strand, within AO353_18995 at 4174.789 kb on - strand, within AO353_18995 at 4174.789 kb on - strand, within AO353_18995 at 4175.004 kb on + strand at 4175.005 kb on - strand at 4175.164 kb on + strand at 4175.165 kb on - strand at 4175.254 kb on - strand, within AO353_19000 at 4175.292 kb on + strand, within AO353_19000 at 4175.292 kb on + strand, within AO353_19000 at 4175.292 kb on + strand, within AO353_19000 at 4175.293 kb on - strand, within AO353_19000 at 4175.314 kb on - strand, within AO353_19000 at 4175.790 kb on + strand at 4175.791 kb on - strand at 4175.899 kb on + strand, within AO353_19005 at 4175.899 kb on + strand, within AO353_19005 at 4175.920 kb on + strand, within AO353_19005 at 4175.920 kb on + strand, within AO353_19005 at 4175.921 kb on - strand, within AO353_19005 at 4175.923 kb on + strand, within AO353_19005 at 4175.923 kb on + strand, within AO353_19005 at 4175.923 kb on + strand, within AO353_19005 at 4175.924 kb on - strand, within AO353_19005 at 4175.924 kb on - strand, within AO353_19005 at 4176.085 kb on + strand at 4176.085 kb on + strand, within AO353_19005 at 4176.085 kb on + strand, within AO353_19005 at 4176.085 kb on + strand, within AO353_19005 at 4176.085 kb on + strand, within AO353_19005 at 4176.086 kb on - strand, within AO353_19005 at 4176.086 kb on - strand, within AO353_19005 at 4176.086 kb on - strand, within AO353_19005 at 4176.086 kb on - strand, within AO353_19005 at 4176.086 kb on - strand, within AO353_19005 at 4176.240 kb on - strand, within AO353_19005 at 4176.240 kb on - strand, within AO353_19005 at 4176.240 kb on - strand, within AO353_19005 at 4176.240 kb on - strand, within AO353_19005 at 4176.240 kb on - strand, within AO353_19005 at 4176.275 kb on + strand, within AO353_19005 at 4176.275 kb on + strand, within AO353_19005 at 4176.276 kb on - strand, within AO353_19005 at 4176.276 kb on - strand, within AO353_19005 at 4176.276 kb on - strand, within AO353_19005 at 4176.418 kb on + strand at 4176.418 kb on + strand at 4176.418 kb on + strand at 4176.424 kb on - strand at 4176.424 kb on - strand at 4176.424 kb on - strand at 4176.435 kb on + strand at 4176.436 kb on - strand at 4176.449 kb on - strand at 4176.789 kb on + strand at 4176.790 kb on - strand at 4176.790 kb on - strand at 4176.805 kb on + strand at 4176.806 kb on - strand at 4176.806 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 4,174,193 + AO353_18995 0.62 -0.0 4,174,193 + AO353_18995 0.62 +1.4 4,174,194 - AO353_18995 0.62 +0.5 4,174,205 + AO353_18995 0.63 +0.2 4,174,205 + AO353_18995 0.63 +0.3 4,174,205 + AO353_18995 0.63 -0.4 4,174,205 + AO353_18995 0.63 +0.9 4,174,206 - AO353_18995 0.63 +0.4 4,174,206 - AO353_18995 0.63 -0.6 4,174,206 - AO353_18995 0.63 -2.5 4,174,356 + AO353_18995 0.69 +0.2 4,174,356 + -0.9 4,174,356 + AO353_18995 0.69 +0.9 4,174,357 - AO353_18995 0.69 +1.1 4,174,357 - AO353_18995 0.69 -0.6 4,174,500 + AO353_18995 0.75 -0.8 4,174,500 + AO353_18995 0.75 -0.3 4,174,500 + AO353_18995 0.75 +0.3 4,174,501 - AO353_18995 0.75 -0.7 4,174,501 - AO353_18995 0.75 +0.6 4,174,581 + AO353_18995 0.78 +1.0 4,174,582 - AO353_18995 0.78 +1.0 4,174,608 + AO353_18995 0.79 +0.6 4,174,608 + AO353_18995 0.79 -0.2 4,174,608 + -1.1 4,174,608 + AO353_18995 0.79 -0.1 4,174,608 + AO353_18995 0.79 -0.5 4,174,608 + AO353_18995 0.79 +0.9 4,174,609 - AO353_18995 0.79 -1.8 4,174,609 - AO353_18995 0.79 +0.6 4,174,609 - AO353_18995 0.79 -1.1 4,174,609 - AO353_18995 0.79 -0.1 4,174,781 + AO353_18995 0.86 -0.7 4,174,788 + AO353_18995 0.86 +0.3 4,174,788 + AO353_18995 0.86 +0.5 4,174,789 - AO353_18995 0.86 +0.5 4,174,789 - AO353_18995 0.86 +0.4 4,174,789 - AO353_18995 0.86 -0.8 4,175,004 + +0.4 4,175,005 - -0.5 4,175,164 + +0.1 4,175,165 - -0.6 4,175,254 - AO353_19000 0.17 -1.1 4,175,292 + AO353_19000 0.23 -1.1 4,175,292 + AO353_19000 0.23 -0.9 4,175,292 + AO353_19000 0.23 -2.1 4,175,293 - AO353_19000 0.23 +0.1 4,175,314 - AO353_19000 0.26 -0.2 4,175,790 + -0.1 4,175,791 - -0.1 4,175,899 + AO353_19005 0.11 +0.6 4,175,899 + AO353_19005 0.11 -1.2 4,175,920 + AO353_19005 0.14 -0.5 4,175,920 + AO353_19005 0.14 -0.8 4,175,921 - AO353_19005 0.14 -0.3 4,175,923 + AO353_19005 0.15 +1.1 4,175,923 + AO353_19005 0.15 +0.5 4,175,923 + AO353_19005 0.15 -0.6 4,175,924 - AO353_19005 0.15 -0.3 4,175,924 - AO353_19005 0.15 -1.1 4,176,085 + +0.5 4,176,085 + AO353_19005 0.41 +0.3 4,176,085 + AO353_19005 0.41 -1.3 4,176,085 + AO353_19005 0.41 -0.6 4,176,085 + AO353_19005 0.41 -0.1 4,176,086 - AO353_19005 0.42 -0.3 4,176,086 - AO353_19005 0.42 -2.0 4,176,086 - AO353_19005 0.42 -1.6 4,176,086 - AO353_19005 0.42 -0.1 4,176,086 - AO353_19005 0.42 -1.2 4,176,240 - AO353_19005 0.67 -0.6 4,176,240 - AO353_19005 0.67 +1.5 4,176,240 - AO353_19005 0.67 -0.3 4,176,240 - AO353_19005 0.67 -1.0 4,176,240 - AO353_19005 0.67 +0.1 4,176,275 + AO353_19005 0.73 +1.2 4,176,275 + AO353_19005 0.73 -0.6 4,176,276 - AO353_19005 0.73 -0.0 4,176,276 - AO353_19005 0.73 +1.9 4,176,276 - AO353_19005 0.73 -0.1 4,176,418 + +0.1 4,176,418 + -0.0 4,176,418 + -1.1 4,176,424 - -0.1 4,176,424 - -0.1 4,176,424 - +0.2 4,176,435 + +1.5 4,176,436 - +0.9 4,176,449 - +1.9 4,176,789 + +0.9 4,176,790 - +0.3 4,176,790 - -0.2 4,176,805 + -0.4 4,176,806 - +1.0 4,176,806 - +0.5
Or see this region's nucleotide sequence