Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13530 and AO353_13535 overlap by 4 nucleotides AO353_13535 and AO353_13540 overlap by 1 nucleotides
AO353_13530: AO353_13530 - ABC transporter ATP-binding protein, at 3,003,291 to 3,004,160
_13530
AO353_13535: AO353_13535 - urea ABC transporter permease subunit UrtC, at 3,004,157 to 3,005,236
_13535
AO353_13540: AO353_13540 - urea ABC transporter permease, at 3,005,236 to 3,006,735
_13540
Position (kb)
3004
3005
3006 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3003.181 kb on + strand at 3003.181 kb on + strand at 3003.181 kb on + strand at 3003.182 kb on - strand at 3003.182 kb on - strand at 3003.221 kb on + strand at 3003.221 kb on + strand at 3003.221 kb on + strand at 3003.221 kb on + strand at 3003.221 kb on + strand at 3003.221 kb on + strand at 3003.222 kb on - strand at 3003.222 kb on - strand at 3003.222 kb on - strand at 3003.222 kb on - strand at 3003.236 kb on + strand at 3003.236 kb on + strand at 3003.237 kb on - strand at 3003.237 kb on - strand at 3003.237 kb on - strand at 3003.279 kb on + strand at 3003.279 kb on + strand at 3003.279 kb on + strand at 3003.279 kb on + strand at 3003.279 kb on + strand at 3003.292 kb on + strand at 3003.292 kb on + strand at 3003.292 kb on + strand at 3003.293 kb on - strand at 3003.293 kb on - strand at 3003.293 kb on - strand at 3003.293 kb on - strand at 3003.293 kb on - strand at 3003.293 kb on - strand at 3003.296 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.304 kb on + strand at 3003.305 kb on - strand at 3003.305 kb on - strand at 3003.305 kb on - strand at 3003.305 kb on - strand at 3003.305 kb on - strand at 3003.305 kb on - strand at 3003.684 kb on + strand, within AO353_13530 at 3003.685 kb on - strand, within AO353_13530 at 3003.727 kb on - strand, within AO353_13530 at 3003.727 kb on - strand, within AO353_13530 at 3003.952 kb on + strand, within AO353_13530 at 3003.952 kb on + strand, within AO353_13530 at 3003.953 kb on - strand, within AO353_13530 at 3003.953 kb on - strand, within AO353_13530 at 3004.206 kb on + strand at 3004.206 kb on + strand at 3004.206 kb on + strand at 3004.206 kb on + strand at 3004.206 kb on + strand at 3004.206 kb on + strand at 3004.207 kb on - strand at 3004.207 kb on - strand at 3004.207 kb on - strand at 3004.207 kb on - strand at 3004.207 kb on - strand at 3004.207 kb on - strand at 3004.207 kb on - strand at 3004.295 kb on + strand, within AO353_13535 at 3004.295 kb on + strand, within AO353_13535 at 3004.295 kb on + strand, within AO353_13535 at 3004.295 kb on + strand, within AO353_13535 at 3004.296 kb on - strand, within AO353_13535 at 3004.296 kb on - strand, within AO353_13535 at 3004.296 kb on - strand, within AO353_13535 at 3004.296 kb on - strand, within AO353_13535 at 3004.296 kb on - strand, within AO353_13535 at 3004.419 kb on + strand, within AO353_13535 at 3004.419 kb on + strand, within AO353_13535 at 3004.764 kb on + strand, within AO353_13535 at 3004.764 kb on + strand at 3004.765 kb on - strand, within AO353_13535 at 3004.765 kb on - strand, within AO353_13535 at 3004.765 kb on - strand, within AO353_13535 at 3004.855 kb on + strand, within AO353_13535 at 3004.855 kb on + strand, within AO353_13535 at 3004.855 kb on + strand, within AO353_13535 at 3004.878 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.953 kb on + strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.954 kb on - strand, within AO353_13535 at 3004.968 kb on + strand, within AO353_13535 at 3004.969 kb on - strand, within AO353_13535 at 3005.059 kb on - strand, within AO353_13535 at 3005.059 kb on - strand, within AO353_13535 at 3005.091 kb on + strand, within AO353_13535 at 3005.329 kb on + strand at 3005.450 kb on + strand, within AO353_13540 at 3005.450 kb on + strand, within AO353_13540 at 3005.450 kb on + strand, within AO353_13540 at 3005.450 kb on + strand, within AO353_13540 at 3005.450 kb on + strand, within AO353_13540 at 3005.450 kb on + strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.451 kb on - strand, within AO353_13540 at 3005.563 kb on + strand, within AO353_13540 at 3005.563 kb on + strand, within AO353_13540 at 3005.696 kb on + strand, within AO353_13540 at 3005.696 kb on + strand, within AO353_13540 at 3005.696 kb on + strand, within AO353_13540 at 3005.696 kb on + strand, within AO353_13540 at 3005.696 kb on + strand, within AO353_13540 at 3005.696 kb on + strand, within AO353_13540 at 3005.697 kb on - strand, within AO353_13540 at 3005.712 kb on + strand, within AO353_13540 at 3005.712 kb on + strand, within AO353_13540 at 3005.719 kb on + strand, within AO353_13540 at 3005.719 kb on + strand, within AO353_13540 at 3005.720 kb on - strand, within AO353_13540 at 3005.720 kb on - strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.797 kb on + strand, within AO353_13540 at 3005.798 kb on - strand, within AO353_13540 at 3005.798 kb on - strand, within AO353_13540 at 3005.798 kb on - strand, within AO353_13540 at 3005.798 kb on - strand, within AO353_13540 at 3005.798 kb on - strand, within AO353_13540 at 3005.936 kb on + strand, within AO353_13540 at 3005.937 kb on - strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.987 kb on + strand, within AO353_13540 at 3005.988 kb on - strand, within AO353_13540 at 3005.988 kb on - strand, within AO353_13540 at 3005.988 kb on - strand, within AO353_13540 at 3005.988 kb on - strand, within AO353_13540 at 3005.988 kb on - strand, within AO353_13540 at 3005.988 kb on - strand, within AO353_13540 at 3005.988 kb on - strand, within AO353_13540 at 3005.996 kb on + strand, within AO353_13540 at 3005.997 kb on - strand, within AO353_13540
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 3,003,181 + +2.4 3,003,181 + +0.5 3,003,181 + -1.1 3,003,182 - -0.1 3,003,182 - +0.9 3,003,221 + +1.3 3,003,221 + +0.0 3,003,221 + -0.7 3,003,221 + -0.0 3,003,221 + +0.6 3,003,221 + -0.9 3,003,222 - +0.4 3,003,222 - -0.8 3,003,222 - +0.4 3,003,222 - -0.9 3,003,236 + -1.1 3,003,236 + -0.5 3,003,237 - -0.7 3,003,237 - +1.6 3,003,237 - +0.8 3,003,279 + +0.9 3,003,279 + -1.5 3,003,279 + -0.3 3,003,279 + -0.2 3,003,279 + -1.6 3,003,292 + +0.4 3,003,292 + -0.5 3,003,292 + +0.1 3,003,293 - -1.1 3,003,293 - -0.5 3,003,293 - -0.3 3,003,293 - +0.2 3,003,293 - -1.2 3,003,293 - +1.2 3,003,296 + -1.8 3,003,304 + +0.8 3,003,304 + +0.1 3,003,304 + -0.3 3,003,304 + -0.5 3,003,304 + -0.5 3,003,304 + -0.9 3,003,304 + +0.9 3,003,304 + +0.2 3,003,304 + -0.6 3,003,304 + -0.9 3,003,305 - -1.3 3,003,305 - -1.3 3,003,305 - -0.9 3,003,305 - -1.0 3,003,305 - -1.3 3,003,305 - -2.0 3,003,684 + AO353_13530 0.45 -2.0 3,003,685 - AO353_13530 0.45 +0.6 3,003,727 - AO353_13530 0.50 +0.9 3,003,727 - AO353_13530 0.50 -1.3 3,003,952 + AO353_13530 0.76 -1.5 3,003,952 + AO353_13530 0.76 +1.1 3,003,953 - AO353_13530 0.76 -0.3 3,003,953 - AO353_13530 0.76 -0.1 3,004,206 + -0.4 3,004,206 + -3.0 3,004,206 + -0.8 3,004,206 + +0.0 3,004,206 + +1.2 3,004,206 + +1.0 3,004,207 - -0.9 3,004,207 - -1.8 3,004,207 - +0.3 3,004,207 - -0.5 3,004,207 - +0.8 3,004,207 - -0.9 3,004,207 - +0.4 3,004,295 + AO353_13535 0.13 -1.5 3,004,295 + AO353_13535 0.13 -0.1 3,004,295 + AO353_13535 0.13 +0.2 3,004,295 + AO353_13535 0.13 +0.2 3,004,296 - AO353_13535 0.13 -0.1 3,004,296 - AO353_13535 0.13 -0.1 3,004,296 - AO353_13535 0.13 -1.5 3,004,296 - AO353_13535 0.13 -2.3 3,004,296 - AO353_13535 0.13 -1.1 3,004,419 + AO353_13535 0.24 -3.2 3,004,419 + AO353_13535 0.24 -1.2 3,004,764 + AO353_13535 0.56 -0.9 3,004,764 + +1.4 3,004,765 - AO353_13535 0.56 -1.1 3,004,765 - AO353_13535 0.56 -1.4 3,004,765 - AO353_13535 0.56 -0.1 3,004,855 + AO353_13535 0.65 +0.4 3,004,855 + AO353_13535 0.65 +0.2 3,004,855 + AO353_13535 0.65 -0.5 3,004,878 + AO353_13535 0.67 +0.2 3,004,953 + AO353_13535 0.74 -0.8 3,004,953 + AO353_13535 0.74 -0.1 3,004,953 + AO353_13535 0.74 -0.3 3,004,953 + AO353_13535 0.74 +0.8 3,004,953 + AO353_13535 0.74 -1.6 3,004,953 + AO353_13535 0.74 -1.0 3,004,953 + AO353_13535 0.74 +0.5 3,004,953 + AO353_13535 0.74 +0.7 3,004,953 + AO353_13535 0.74 -1.1 3,004,953 + AO353_13535 0.74 -0.4 3,004,954 - AO353_13535 0.74 +0.2 3,004,954 - AO353_13535 0.74 -0.4 3,004,954 - AO353_13535 0.74 -1.5 3,004,954 - AO353_13535 0.74 +2.4 3,004,954 - AO353_13535 0.74 -1.2 3,004,954 - AO353_13535 0.74 -0.4 3,004,954 - AO353_13535 0.74 -1.3 3,004,954 - AO353_13535 0.74 +1.4 3,004,954 - AO353_13535 0.74 +0.7 3,004,954 - AO353_13535 0.74 -0.7 3,004,968 + AO353_13535 0.75 -1.4 3,004,969 - AO353_13535 0.75 -0.7 3,005,059 - AO353_13535 0.84 -1.0 3,005,059 - AO353_13535 0.84 +0.1 3,005,091 + AO353_13535 0.86 -1.5 3,005,329 + -0.4 3,005,450 + AO353_13540 0.14 -0.1 3,005,450 + AO353_13540 0.14 -1.0 3,005,450 + AO353_13540 0.14 +0.3 3,005,450 + AO353_13540 0.14 -1.0 3,005,450 + AO353_13540 0.14 -1.1 3,005,450 + AO353_13540 0.14 +0.5 3,005,451 - AO353_13540 0.14 +0.7 3,005,451 - AO353_13540 0.14 +0.1 3,005,451 - AO353_13540 0.14 -0.5 3,005,451 - AO353_13540 0.14 +1.7 3,005,451 - AO353_13540 0.14 +0.6 3,005,451 - AO353_13540 0.14 -2.2 3,005,451 - AO353_13540 0.14 -1.8 3,005,451 - AO353_13540 0.14 -2.9 3,005,451 - AO353_13540 0.14 +0.2 3,005,563 + AO353_13540 0.22 -0.4 3,005,563 + AO353_13540 0.22 -0.8 3,005,696 + AO353_13540 0.31 -1.8 3,005,696 + AO353_13540 0.31 +0.3 3,005,696 + AO353_13540 0.31 -0.1 3,005,696 + AO353_13540 0.31 +0.7 3,005,696 + AO353_13540 0.31 -0.6 3,005,696 + AO353_13540 0.31 +0.3 3,005,697 - AO353_13540 0.31 +2.1 3,005,712 + AO353_13540 0.32 -2.1 3,005,712 + AO353_13540 0.32 -0.6 3,005,719 + AO353_13540 0.32 -0.4 3,005,719 + AO353_13540 0.32 -0.1 3,005,720 - AO353_13540 0.32 +1.1 3,005,720 - AO353_13540 0.32 -1.4 3,005,797 + AO353_13540 0.37 -1.0 3,005,797 + AO353_13540 0.37 -1.3 3,005,797 + AO353_13540 0.37 -0.5 3,005,797 + AO353_13540 0.37 +0.1 3,005,797 + AO353_13540 0.37 +0.1 3,005,797 + AO353_13540 0.37 +0.2 3,005,797 + AO353_13540 0.37 +0.5 3,005,797 + AO353_13540 0.37 -0.8 3,005,797 + AO353_13540 0.37 -1.4 3,005,797 + AO353_13540 0.37 -0.1 3,005,797 + AO353_13540 0.37 -1.4 3,005,798 - AO353_13540 0.37 +1.9 3,005,798 - AO353_13540 0.37 -0.1 3,005,798 - AO353_13540 0.37 -1.5 3,005,798 - AO353_13540 0.37 -0.1 3,005,798 - AO353_13540 0.37 -0.4 3,005,936 + AO353_13540 0.47 -0.9 3,005,937 - AO353_13540 0.47 -0.3 3,005,987 + AO353_13540 0.50 +0.3 3,005,987 + AO353_13540 0.50 -0.5 3,005,987 + AO353_13540 0.50 -0.5 3,005,987 + AO353_13540 0.50 -2.0 3,005,987 + AO353_13540 0.50 -0.2 3,005,987 + AO353_13540 0.50 -0.7 3,005,987 + AO353_13540 0.50 -0.3 3,005,987 + AO353_13540 0.50 -0.6 3,005,987 + AO353_13540 0.50 -0.1 3,005,987 + AO353_13540 0.50 -0.2 3,005,987 + AO353_13540 0.50 -0.1 3,005,988 - AO353_13540 0.50 -1.5 3,005,988 - AO353_13540 0.50 -0.2 3,005,988 - AO353_13540 0.50 -0.8 3,005,988 - AO353_13540 0.50 -1.5 3,005,988 - AO353_13540 0.50 -0.8 3,005,988 - AO353_13540 0.50 -1.1 3,005,988 - AO353_13540 0.50 +1.4 3,005,996 + AO353_13540 0.51 -0.9 3,005,997 - AO353_13540 0.51 -0.9
Or see this region's nucleotide sequence