Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04665 and AO353_04670 are separated by 349 nucleotides AO353_04670 and AO353_04675 are separated by 305 nucleotides
AO353_04665: AO353_04665 - ATPase, at 1,005,248 to 1,006,639
_04665
AO353_04670: AO353_04670 - polysaccharide deacetylase, at 1,006,989 to 1,008,113
_04670
AO353_04675: AO353_04675 - hypothetical protein, at 1,008,419 to 1,009,198
_04675
Position (kb)
1006
1007
1008
1009 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1006.003 kb on + strand, within AO353_04665 at 1006.003 kb on + strand, within AO353_04665 at 1006.003 kb on + strand, within AO353_04665 at 1006.003 kb on + strand, within AO353_04665 at 1006.004 kb on - strand, within AO353_04665 at 1006.004 kb on - strand, within AO353_04665 at 1006.004 kb on - strand, within AO353_04665 at 1006.164 kb on + strand, within AO353_04665 at 1006.164 kb on + strand, within AO353_04665 at 1006.164 kb on + strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.578 kb on - strand at 1006.578 kb on - strand at 1006.578 kb on - strand at 1006.578 kb on - strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.621 kb on + strand at 1006.621 kb on + strand at 1006.622 kb on - strand at 1006.622 kb on - strand at 1006.622 kb on - strand at 1006.639 kb on + strand at 1006.640 kb on - strand at 1006.640 kb on - strand at 1006.674 kb on + strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.814 kb on - strand at 1006.814 kb on - strand at 1006.816 kb on + strand at 1006.816 kb on + strand at 1006.817 kb on - strand at 1006.817 kb on - strand at 1006.867 kb on - strand at 1006.914 kb on + strand at 1006.938 kb on + strand at 1006.938 kb on + strand at 1006.938 kb on + strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.974 kb on - strand at 1007.333 kb on - strand, within AO353_04670 at 1007.333 kb on - strand, within AO353_04670 at 1007.333 kb on - strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.501 kb on - strand, within AO353_04670 at 1007.600 kb on - strand, within AO353_04670 at 1007.600 kb on - strand, within AO353_04670 at 1007.713 kb on + strand, within AO353_04670 at 1007.714 kb on - strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.716 kb on + strand, within AO353_04670 at 1007.717 kb on - strand, within AO353_04670 at 1007.717 kb on - strand, within AO353_04670 at 1007.825 kb on + strand, within AO353_04670 at 1007.825 kb on + strand, within AO353_04670 at 1007.825 kb on + strand, within AO353_04670 at 1007.825 kb on + strand, within AO353_04670 at 1007.825 kb on + strand, within AO353_04670 at 1007.826 kb on - strand, within AO353_04670 at 1007.826 kb on - strand, within AO353_04670 at 1007.826 kb on - strand, within AO353_04670 at 1007.826 kb on - strand, within AO353_04670 at 1007.826 kb on - strand, within AO353_04670 at 1007.827 kb on + strand, within AO353_04670 at 1007.827 kb on + strand, within AO353_04670 at 1007.827 kb on + strand, within AO353_04670 at 1007.827 kb on + strand, within AO353_04670 at 1007.827 kb on + strand, within AO353_04670 at 1007.827 kb on + strand, within AO353_04670 at 1007.827 kb on + strand, within AO353_04670 at 1007.828 kb on - strand, within AO353_04670 at 1007.828 kb on - strand, within AO353_04670 at 1007.828 kb on - strand, within AO353_04670 at 1007.828 kb on - strand, within AO353_04670 at 1007.852 kb on + strand, within AO353_04670 at 1007.852 kb on + strand, within AO353_04670 at 1007.852 kb on + strand, within AO353_04670 at 1007.853 kb on - strand, within AO353_04670 at 1007.853 kb on - strand, within AO353_04670 at 1007.913 kb on + strand, within AO353_04670 at 1007.914 kb on - strand, within AO353_04670 at 1008.065 kb on - strand at 1008.065 kb on - strand at 1008.099 kb on + strand at 1008.099 kb on + strand at 1008.099 kb on + strand at 1008.100 kb on - strand at 1008.100 kb on - strand at 1008.127 kb on + strand at 1008.128 kb on - strand at 1008.147 kb on + strand at 1008.147 kb on + strand at 1008.147 kb on + strand at 1008.147 kb on + strand at 1008.147 kb on + strand at 1008.147 kb on + strand at 1008.148 kb on - strand at 1008.148 kb on - strand at 1008.148 kb on - strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.149 kb on + strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.150 kb on - strand at 1008.348 kb on + strand at 1008.349 kb on - strand at 1008.349 kb on - strand at 1008.359 kb on + strand at 1008.386 kb on + strand at 1008.386 kb on + strand at 1008.386 kb on + strand at 1008.386 kb on + strand at 1008.386 kb on + strand at 1008.386 kb on + strand at 1008.387 kb on - strand at 1008.403 kb on + strand at 1008.455 kb on + strand at 1008.497 kb on + strand, within AO353_04675 at 1008.497 kb on + strand, within AO353_04675 at 1008.497 kb on + strand, within AO353_04675 at 1008.498 kb on - strand, within AO353_04675 at 1008.631 kb on + strand, within AO353_04675 at 1008.680 kb on + strand, within AO353_04675 at 1008.680 kb on + strand, within AO353_04675 at 1008.680 kb on + strand, within AO353_04675 at 1008.681 kb on - strand, within AO353_04675 at 1008.681 kb on - strand, within AO353_04675 at 1008.681 kb on - strand, within AO353_04675 at 1008.681 kb on - strand, within AO353_04675 at 1008.681 kb on - strand, within AO353_04675 at 1008.725 kb on + strand, within AO353_04675 at 1008.725 kb on + strand, within AO353_04675 at 1008.726 kb on - strand, within AO353_04675 at 1008.726 kb on - strand, within AO353_04675 at 1008.762 kb on - strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.848 kb on + strand, within AO353_04675 at 1008.849 kb on - strand, within AO353_04675 at 1008.849 kb on - strand, within AO353_04675 at 1008.849 kb on - strand, within AO353_04675 at 1008.849 kb on - strand, within AO353_04675 at 1008.849 kb on - strand, within AO353_04675 at 1009.019 kb on + strand, within AO353_04675 at 1009.019 kb on + strand, within AO353_04675 at 1009.020 kb on - strand, within AO353_04675 at 1009.020 kb on - strand, within AO353_04675 at 1009.020 kb on - strand, within AO353_04675 at 1009.037 kb on + strand, within AO353_04675 at 1009.037 kb on + strand, within AO353_04675 at 1009.037 kb on + strand, within AO353_04675 at 1009.037 kb on + strand, within AO353_04675 at 1009.037 kb on + strand, within AO353_04675 at 1009.038 kb on - strand, within AO353_04675 at 1009.038 kb on - strand, within AO353_04675 at 1009.038 kb on - strand, within AO353_04675 at 1009.038 kb on - strand, within AO353_04675 at 1009.038 kb on - strand, within AO353_04675 at 1009.038 kb on - strand, within AO353_04675
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 1,006,003 + AO353_04665 0.54 -0.8 1,006,003 + AO353_04665 0.54 -0.2 1,006,003 + AO353_04665 0.54 +0.6 1,006,003 + AO353_04665 0.54 -0.8 1,006,004 - AO353_04665 0.54 +0.2 1,006,004 - AO353_04665 0.54 -0.4 1,006,004 - AO353_04665 0.54 -0.7 1,006,164 + AO353_04665 0.66 -0.2 1,006,164 + AO353_04665 0.66 -0.8 1,006,164 + AO353_04665 0.66 +0.4 1,006,165 - AO353_04665 0.66 +0.5 1,006,165 - AO353_04665 0.66 -0.5 1,006,165 - AO353_04665 0.66 -0.9 1,006,165 - AO353_04665 0.66 -0.1 1,006,165 - AO353_04665 0.66 -0.6 1,006,577 + +1.3 1,006,577 + +0.4 1,006,577 + -0.4 1,006,577 + +0.5 1,006,577 + +0.5 1,006,577 + -0.3 1,006,577 + -0.2 1,006,577 + +0.3 1,006,577 + -2.0 1,006,577 + +0.4 1,006,577 + -0.8 1,006,577 + +0.3 1,006,577 + -0.7 1,006,578 - -0.5 1,006,578 - +0.7 1,006,578 - -0.5 1,006,578 - +1.2 1,006,592 + -0.3 1,006,592 + +0.4 1,006,592 + -0.4 1,006,592 + -0.8 1,006,592 + +0.4 1,006,593 - +1.0 1,006,593 - +0.1 1,006,593 - +0.4 1,006,593 - -0.4 1,006,593 - -0.1 1,006,596 + +0.0 1,006,596 + -0.5 1,006,596 + +0.4 1,006,596 + +0.8 1,006,596 + -1.0 1,006,597 - -0.5 1,006,597 - +1.0 1,006,597 - -0.6 1,006,597 - -0.1 1,006,597 - +1.2 1,006,597 - -1.4 1,006,597 - -2.0 1,006,597 - +0.5 1,006,597 - -0.7 1,006,597 - -0.8 1,006,597 - -0.6 1,006,597 - -1.1 1,006,597 - -0.1 1,006,621 + -0.8 1,006,621 + +1.4 1,006,622 - +0.3 1,006,622 - -0.6 1,006,622 - -1.3 1,006,639 + -1.2 1,006,640 - -1.6 1,006,640 - -0.7 1,006,674 + +0.0 1,006,675 - -0.1 1,006,675 - -1.0 1,006,675 - +0.4 1,006,675 - +0.6 1,006,675 - +0.3 1,006,813 + +0.6 1,006,813 + +0.5 1,006,813 + +0.1 1,006,813 + -0.6 1,006,813 + -1.0 1,006,814 - +0.6 1,006,814 - -1.1 1,006,816 + -1.8 1,006,816 + -0.6 1,006,817 - +0.1 1,006,817 - +0.1 1,006,867 - +0.7 1,006,914 + +0.4 1,006,938 + +0.2 1,006,938 + +1.2 1,006,938 + +0.7 1,006,939 - +0.4 1,006,939 - -0.2 1,006,939 - +1.0 1,006,939 - +0.4 1,006,939 - +0.6 1,006,939 - +1.4 1,006,939 - +1.2 1,006,974 - +1.5 1,007,333 - AO353_04670 0.31 -0.6 1,007,333 - AO353_04670 0.31 -0.4 1,007,333 - AO353_04670 0.31 +1.0 1,007,401 + AO353_04670 0.37 +0.0 1,007,401 + AO353_04670 0.37 -1.1 1,007,401 + AO353_04670 0.37 -0.6 1,007,401 + AO353_04670 0.37 +0.6 1,007,402 - AO353_04670 0.37 +0.4 1,007,402 - AO353_04670 0.37 -1.1 1,007,402 - AO353_04670 0.37 -0.8 1,007,402 - AO353_04670 0.37 -1.4 1,007,500 + AO353_04670 0.45 -0.5 1,007,500 + AO353_04670 0.45 +0.7 1,007,500 + AO353_04670 0.45 +0.4 1,007,500 + AO353_04670 0.45 -1.8 1,007,501 - AO353_04670 0.46 +1.2 1,007,600 - AO353_04670 0.54 -0.5 1,007,600 - AO353_04670 0.54 -0.1 1,007,713 + AO353_04670 0.64 +0.2 1,007,714 - AO353_04670 0.64 +0.2 1,007,716 + AO353_04670 0.65 +0.9 1,007,716 + AO353_04670 0.65 +1.7 1,007,716 + AO353_04670 0.65 -0.3 1,007,716 + AO353_04670 0.65 +1.1 1,007,716 + AO353_04670 0.65 +1.2 1,007,716 + AO353_04670 0.65 -0.7 1,007,716 + AO353_04670 0.65 +0.5 1,007,716 + AO353_04670 0.65 -0.3 1,007,717 - AO353_04670 0.65 -0.1 1,007,717 - AO353_04670 0.65 -3.1 1,007,825 + AO353_04670 0.74 +0.2 1,007,825 + AO353_04670 0.74 -0.4 1,007,825 + AO353_04670 0.74 +1.0 1,007,825 + AO353_04670 0.74 -0.1 1,007,825 + AO353_04670 0.74 -0.5 1,007,826 - AO353_04670 0.74 +1.2 1,007,826 - AO353_04670 0.74 +0.6 1,007,826 - AO353_04670 0.74 -1.0 1,007,826 - AO353_04670 0.74 -1.0 1,007,826 - AO353_04670 0.74 +0.4 1,007,827 + AO353_04670 0.74 -1.3 1,007,827 + AO353_04670 0.74 -0.1 1,007,827 + AO353_04670 0.74 -1.1 1,007,827 + AO353_04670 0.74 +0.3 1,007,827 + AO353_04670 0.74 -0.2 1,007,827 + AO353_04670 0.74 +0.8 1,007,827 + AO353_04670 0.74 +1.4 1,007,828 - AO353_04670 0.75 +1.5 1,007,828 - AO353_04670 0.75 -0.1 1,007,828 - AO353_04670 0.75 -1.4 1,007,828 - AO353_04670 0.75 +0.8 1,007,852 + AO353_04670 0.77 -0.3 1,007,852 + AO353_04670 0.77 +1.0 1,007,852 + AO353_04670 0.77 +1.4 1,007,853 - AO353_04670 0.77 +1.8 1,007,853 - AO353_04670 0.77 -1.3 1,007,913 + AO353_04670 0.82 -0.6 1,007,914 - AO353_04670 0.82 -1.3 1,008,065 - -0.5 1,008,065 - +0.4 1,008,099 + -2.0 1,008,099 + -1.3 1,008,099 + -0.6 1,008,100 - +1.4 1,008,100 - -0.8 1,008,127 + -0.5 1,008,128 - -0.6 1,008,147 + +0.1 1,008,147 + -1.1 1,008,147 + +0.1 1,008,147 + -0.2 1,008,147 + +0.9 1,008,147 + -0.4 1,008,148 - +1.9 1,008,148 - +0.0 1,008,148 - +1.2 1,008,149 + -0.1 1,008,149 + -0.3 1,008,149 + +0.9 1,008,149 + +1.1 1,008,149 + -0.3 1,008,149 + -0.8 1,008,149 + -0.2 1,008,149 + -1.9 1,008,149 + -1.1 1,008,149 + +1.2 1,008,149 + +0.9 1,008,149 + +0.7 1,008,149 + -1.1 1,008,149 + -0.0 1,008,150 - -0.7 1,008,150 - +1.0 1,008,150 - -0.6 1,008,150 - +0.3 1,008,150 - +0.0 1,008,150 - +0.0 1,008,150 - -1.2 1,008,150 - -0.4 1,008,150 - -2.0 1,008,150 - +0.1 1,008,150 - -0.1 1,008,150 - -1.3 1,008,150 - +0.7 1,008,348 + +2.0 1,008,349 - -0.1 1,008,349 - -0.3 1,008,359 + +0.2 1,008,386 + +3.2 1,008,386 + -1.3 1,008,386 + +0.2 1,008,386 + +0.2 1,008,386 + -0.3 1,008,386 + +0.2 1,008,387 - -1.5 1,008,403 + -0.4 1,008,455 + +0.2 1,008,497 + AO353_04675 0.10 -0.0 1,008,497 + AO353_04675 0.10 +1.0 1,008,497 + AO353_04675 0.10 -1.0 1,008,498 - AO353_04675 0.10 +0.1 1,008,631 + AO353_04675 0.27 -0.6 1,008,680 + AO353_04675 0.33 -0.2 1,008,680 + AO353_04675 0.33 -0.4 1,008,680 + AO353_04675 0.33 -1.4 1,008,681 - AO353_04675 0.34 -1.5 1,008,681 - AO353_04675 0.34 -1.6 1,008,681 - AO353_04675 0.34 -0.6 1,008,681 - AO353_04675 0.34 +0.2 1,008,681 - AO353_04675 0.34 -0.3 1,008,725 + AO353_04675 0.39 +0.8 1,008,725 + AO353_04675 0.39 +0.0 1,008,726 - AO353_04675 0.39 +0.2 1,008,726 - AO353_04675 0.39 -0.4 1,008,762 - AO353_04675 0.44 +0.9 1,008,848 + AO353_04675 0.55 -1.0 1,008,848 + AO353_04675 0.55 -0.3 1,008,848 + AO353_04675 0.55 +0.2 1,008,848 + AO353_04675 0.55 +1.0 1,008,848 + AO353_04675 0.55 +0.4 1,008,848 + AO353_04675 0.55 +0.0 1,008,848 + AO353_04675 0.55 +0.7 1,008,848 + AO353_04675 0.55 +0.4 1,008,849 - AO353_04675 0.55 -1.1 1,008,849 - AO353_04675 0.55 -0.8 1,008,849 - AO353_04675 0.55 -0.3 1,008,849 - AO353_04675 0.55 +0.0 1,008,849 - AO353_04675 0.55 +0.1 1,009,019 + AO353_04675 0.77 -0.2 1,009,019 + AO353_04675 0.77 +0.8 1,009,020 - AO353_04675 0.77 +0.2 1,009,020 - AO353_04675 0.77 -0.9 1,009,020 - AO353_04675 0.77 +0.2 1,009,037 + AO353_04675 0.79 +1.0 1,009,037 + AO353_04675 0.79 +0.9 1,009,037 + AO353_04675 0.79 -1.0 1,009,037 + AO353_04675 0.79 -0.3 1,009,037 + AO353_04675 0.79 +0.3 1,009,038 - AO353_04675 0.79 +0.0 1,009,038 - AO353_04675 0.79 -0.7 1,009,038 - AO353_04675 0.79 +0.4 1,009,038 - AO353_04675 0.79 -0.5 1,009,038 - AO353_04675 0.79 -0.1 1,009,038 - AO353_04675 0.79 -0.3
Or see this region's nucleotide sequence