Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4555 and BT4556 are separated by 23 nucleotides BT4556 and BT4557 are separated by 9 nucleotides
BT4555: BT4555 - conserved hypothetical protein (NCBI ptt file), at 5,977,272 to 5,978,273
BT4555
BT4556: BT4556 - hypothetical protein (NCBI ptt file), at 5,978,297 to 5,978,767
BT4556
BT4557: BT4557 - hypothetical protein (NCBI ptt file), at 5,978,777 to 5,980,204
BT4557
Position (kb)
5978
5979 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5977.378 kb on - strand, within BT4555 at 5977.607 kb on + strand, within BT4555 at 5977.673 kb on + strand, within BT4555 at 5977.674 kb on - strand, within BT4555 at 5977.674 kb on - strand, within BT4555 at 5977.743 kb on + strand, within BT4555 at 5977.887 kb on + strand, within BT4555 at 5977.983 kb on + strand, within BT4555 at 5977.995 kb on + strand, within BT4555 at 5977.995 kb on + strand at 5978.103 kb on - strand, within BT4555 at 5978.103 kb on - strand, within BT4555 at 5978.104 kb on + strand, within BT4555 at 5978.105 kb on - strand, within BT4555 at 5978.200 kb on + strand at 5978.201 kb on - strand at 5978.211 kb on + strand at 5978.258 kb on - strand at 5978.390 kb on + strand, within BT4556 at 5978.421 kb on + strand, within BT4556 at 5978.594 kb on + strand, within BT4556 at 5978.641 kb on - strand, within BT4556 at 5978.656 kb on + strand, within BT4556 at 5978.721 kb on - strand at 5978.726 kb on + strand at 5978.759 kb on + strand at 5978.916 kb on + strand at 5979.033 kb on + strand, within BT4557 at 5979.033 kb on + strand, within BT4557 at 5979.044 kb on - strand, within BT4557 at 5979.217 kb on + strand, within BT4557 at 5979.248 kb on + strand, within BT4557 at 5979.341 kb on - strand, within BT4557 at 5979.422 kb on - strand, within BT4557 at 5979.463 kb on + strand, within BT4557
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.01 mg/ml remove 5,977,378 - BT4555 0.11 +1.6 5,977,607 + BT4555 0.33 +0.4 5,977,673 + BT4555 0.40 -0.5 5,977,674 - BT4555 0.40 +1.0 5,977,674 - BT4555 0.40 -1.7 5,977,743 + BT4555 0.47 -0.7 5,977,887 + BT4555 0.61 -2.6 5,977,983 + BT4555 0.71 -0.5 5,977,995 + BT4555 0.72 -0.4 5,977,995 + +1.2 5,978,103 - BT4555 0.83 -1.2 5,978,103 - BT4555 0.83 -0.4 5,978,104 + BT4555 0.83 +1.0 5,978,105 - BT4555 0.83 -1.6 5,978,200 + -1.2 5,978,201 - +0.6 5,978,211 + -1.0 5,978,258 - -0.3 5,978,390 + BT4556 0.20 -2.4 5,978,421 + BT4556 0.26 -1.4 5,978,594 + BT4556 0.63 -2.7 5,978,641 - BT4556 0.73 -0.7 5,978,656 + BT4556 0.76 -1.7 5,978,721 - -0.6 5,978,726 + -0.4 5,978,759 + -0.1 5,978,916 + -0.4 5,979,033 + BT4557 0.18 +1.6 5,979,033 + BT4557 0.18 +0.6 5,979,044 - BT4557 0.19 +0.2 5,979,217 + BT4557 0.31 -1.3 5,979,248 + BT4557 0.33 -1.2 5,979,341 - BT4557 0.39 -1.4 5,979,422 - BT4557 0.45 -2.9 5,979,463 + BT4557 0.48 -2.0
Or see this region's nucleotide sequence