Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT2490 and BT2491 are separated by 59 nucleotides BT2491 and BT2492 are separated by 7 nucleotides BT2492 and BT2493 are separated by 170 nucleotides
BT2490: BT2490 - hypothetical protein (NCBI ptt file), at 3,113,773 to 3,114,066
BT2490
BT2491: BT2491 - hypothetical protein (NCBI ptt file), at 3,114,126 to 3,114,707
BT2491
BT2492: BT2492 - RNA polymerase ECF-type sigma factor (NCBI ptt file), at 3,114,715 to 3,115,191
BT2492
BT2493: BT2493 - ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file), at 3,115,362 to 3,116,342
BT2493
Position (kb)
3114
3115
3116 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3113.719 kb on + strand at 3113.720 kb on - strand at 3113.826 kb on - strand, within BT2490 at 3113.827 kb on + strand, within BT2490 at 3113.828 kb on - strand, within BT2490 at 3113.840 kb on + strand, within BT2490 at 3113.922 kb on - strand, within BT2490 at 3114.035 kb on + strand, within BT2490 at 3114.073 kb on - strand at 3114.081 kb on - strand at 3114.094 kb on - strand at 3114.138 kb on - strand at 3114.723 kb on + strand at 3114.748 kb on - strand at 3114.790 kb on + strand, within BT2492 at 3114.795 kb on + strand, within BT2492 at 3114.795 kb on + strand, within BT2492 at 3114.835 kb on + strand, within BT2492 at 3114.835 kb on + strand, within BT2492 at 3114.835 kb on + strand, within BT2492 at 3114.836 kb on - strand, within BT2492 at 3114.850 kb on - strand at 3114.882 kb on - strand, within BT2492 at 3114.904 kb on - strand, within BT2492 at 3114.991 kb on - strand, within BT2492 at 3114.991 kb on - strand, within BT2492 at 3115.001 kb on - strand, within BT2492 at 3115.021 kb on + strand, within BT2492 at 3115.023 kb on + strand, within BT2492 at 3115.023 kb on + strand, within BT2492 at 3115.026 kb on + strand, within BT2492 at 3115.044 kb on + strand, within BT2492 at 3115.146 kb on + strand at 3115.227 kb on + strand at 3115.228 kb on - strand at 3115.268 kb on + strand at 3115.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.01 mg/ml remove 3,113,719 + -1.2 3,113,720 - -0.5 3,113,826 - BT2490 0.18 +1.5 3,113,827 + BT2490 0.18 -0.3 3,113,828 - BT2490 0.19 -0.1 3,113,840 + BT2490 0.23 -0.8 3,113,922 - BT2490 0.51 -0.1 3,114,035 + BT2490 0.89 +0.1 3,114,073 - -1.3 3,114,081 - -0.1 3,114,094 - -1.2 3,114,138 - -2.2 3,114,723 + -1.9 3,114,748 - +0.5 3,114,790 + BT2492 0.16 -2.7 3,114,795 + BT2492 0.17 -2.5 3,114,795 + BT2492 0.17 -1.7 3,114,835 + BT2492 0.25 -1.1 3,114,835 + BT2492 0.25 -2.8 3,114,835 + BT2492 0.25 -0.1 3,114,836 - BT2492 0.25 +0.5 3,114,850 - -0.8 3,114,882 - BT2492 0.35 -3.2 3,114,904 - BT2492 0.40 -0.5 3,114,991 - BT2492 0.58 -0.9 3,114,991 - BT2492 0.58 -0.1 3,115,001 - BT2492 0.60 -2.4 3,115,021 + BT2492 0.64 -1.2 3,115,023 + BT2492 0.65 -1.1 3,115,023 + BT2492 0.65 -2.7 3,115,026 + BT2492 0.65 -0.9 3,115,044 + BT2492 0.69 -0.1 3,115,146 + -1.5 3,115,227 + -0.8 3,115,228 - -1.6 3,115,268 + -1.8 3,115,273 - -0.2
Or see this region's nucleotide sequence