Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08370

Experiment: NAG carbon and (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG carbon and (N); with MOPS
1,870,921	+		PFLU_RS08365	0.18	-3.0
1,870,921	+		PFLU_RS08365	0.18	-1.0
1,870,921	+		PFLU_RS08365	0.18	-1.0
1,870,921	+		PFLU_RS08365	0.18	-0.2
1,870,921	+		PFLU_RS08365	0.18	-1.3
1,870,921	+		PFLU_RS08365	0.18	-1.3
1,870,921	+		PFLU_RS08365	0.18	-1.3
1,870,921	+		PFLU_RS08365	0.18	-1.2
1,870,921	+		PFLU_RS08365	0.18	-0.9
1,870,921	+		PFLU_RS08365	0.18	-1.6
1,870,921	+		PFLU_RS08365	0.18	-2.3
1,870,921	+		PFLU_RS08365	0.18	-1.2
1,870,921	+		PFLU_RS08365	0.18	-1.9
1,870,921	+		PFLU_RS08365	0.18	-3.1
1,870,921	+		PFLU_RS08365	0.18	+0.2
1,870,921	+		PFLU_RS08365	0.18	-1.4
1,870,921	+		PFLU_RS08365	0.18	-0.2
1,870,921	+		PFLU_RS08365	0.18	-2.1
1,870,921	+		PFLU_RS08365	0.18	-0.9
1,870,922	-		PFLU_RS08365	0.18	+0.3
1,870,922	-		PFLU_RS08365	0.18	-0.4
1,870,922	-		PFLU_RS08365	0.18	-2.3
1,870,922	-		PFLU_RS08365	0.18	-1.0
1,870,922	-		PFLU_RS08365	0.18	-0.4
1,870,922	-		PFLU_RS08365	0.18	-1.0
1,870,922	-		PFLU_RS08365	0.18	-1.5
1,870,922	-		PFLU_RS08365	0.18	+0.4
1,870,922	-		PFLU_RS08365	0.18	-2.5
1,870,922	-		PFLU_RS08365	0.18	-2.9
1,870,922	-		PFLU_RS08365	0.18	-2.3
1,870,922	-		PFLU_RS08365	0.18	-1.6
1,870,922	-		PFLU_RS08365	0.18	+0.6
1,870,922	-		PFLU_RS08365	0.18	+0.6
1,870,922	-		PFLU_RS08365	0.18	-0.3
1,870,922	-		PFLU_RS08365	0.18	-3.0
1,870,922	-		PFLU_RS08365	0.18	+0.6
1,870,922	-		PFLU_RS08365	0.18	+0.3
1,870,922	-		PFLU_RS08365	0.18	-1.0
1,870,922	-		PFLU_RS08365	0.18	-3.0
1,870,922	-		PFLU_RS08365	0.18	-0.8
1,870,922	-		PFLU_RS08365	0.18	-1.3
1,870,922	-		PFLU_RS08365	0.18	-1.8
1,870,922	-		PFLU_RS08365	0.18	-1.4
1,870,922	-		PFLU_RS08365	0.18	-1.3
1,870,922	-		PFLU_RS08365	0.18	-0.0
1,870,922	-		PFLU_RS08365	0.18	-0.4
1,870,922	-		PFLU_RS08365	0.18	-2.1
1,870,933	+		PFLU_RS08365	0.19	-0.4
1,870,933	+		PFLU_RS08365	0.19	-1.1
1,871,074	+		PFLU_RS08365	0.34	+0.5
1,871,074	+		PFLU_RS08365	0.34	-2.7
1,871,074	+		PFLU_RS08365	0.34	-1.3
1,871,074	+		PFLU_RS08365	0.34	-0.6
1,871,075	-		PFLU_RS08365	0.34	-2.0
1,871,075	-		PFLU_RS08365	0.34	+1.0
1,871,077	+		PFLU_RS08365	0.34	-2.1
1,871,077	+		PFLU_RS08365	0.34	+1.6
1,871,077	+		PFLU_RS08365	0.34	+0.1
1,871,077	+		PFLU_RS08365	0.34	+0.7
1,871,077	+		PFLU_RS08365	0.34	-1.8
1,871,077	+		PFLU_RS08365	0.34	-2.8
1,871,077	+		PFLU_RS08365	0.34	-0.8
1,871,077	+		PFLU_RS08365	0.34	-1.3
1,871,077	+		PFLU_RS08365	0.34	-1.6
1,871,077	+		PFLU_RS08365	0.34	-2.1
1,871,078	-		PFLU_RS08365	0.34	-1.8
1,871,078	-		PFLU_RS08365	0.34	-2.3
1,871,078	-		PFLU_RS08365	0.34	-0.4
1,871,078	-		PFLU_RS08365	0.34	-0.8
1,871,078	-		PFLU_RS08365	0.34	-1.8
1,871,078	-		PFLU_RS08365	0.34	+0.3
1,871,104	+		PFLU_RS08365	0.37	-0.0
1,871,104	+		PFLU_RS08365	0.37	-0.0
1,871,104	+		PFLU_RS08365	0.37	-2.0
1,871,104	+		PFLU_RS08365	0.37	-0.9
1,871,104	+		PFLU_RS08365	0.37	-0.2
1,871,104	+		PFLU_RS08365	0.37	-1.5
1,871,104	+		PFLU_RS08365	0.37	+0.2
1,871,104	+		PFLU_RS08365	0.37	+1.6
1,871,105	-		PFLU_RS08365	0.37	+0.1
1,871,105	-		PFLU_RS08365	0.37	+0.1
1,871,105	-		PFLU_RS08365	0.37	-0.3
1,871,105	-		PFLU_RS08365	0.37	-3.1
1,871,105	-		PFLU_RS08365	0.37	-1.2
1,871,105	-		PFLU_RS08365	0.37	+0.1
1,871,314	+		PFLU_RS08365	0.59	-1.7
1,871,315	-		PFLU_RS08365	0.59	-1.4
1,871,358	+		PFLU_RS08365	0.63	-2.4
1,871,358	+		PFLU_RS08365	0.63	+1.8
1,871,358	+		PFLU_RS08365	0.63	-2.1
1,871,358	+		PFLU_RS08365	0.63	-0.6
1,871,358	+		PFLU_RS08365	0.63	-2.8
1,871,358	+		PFLU_RS08365	0.63	-2.3
1,871,358	+		PFLU_RS08365	0.63	-1.7
1,871,359	-		PFLU_RS08365	0.63	-1.3
1,871,359	-		PFLU_RS08365	0.63	+1.1
1,871,359	-		PFLU_RS08365	0.63	+0.6
1,871,359	-		PFLU_RS08365	0.63	-1.4
1,871,359	-		PFLU_RS08365	0.63	-0.3
1,871,359	-		PFLU_RS08365	0.63	-2.4
1,871,379	+		PFLU_RS08365	0.65	-1.6
1,871,379	+		PFLU_RS08365	0.65	-1.6
1,871,379	+		PFLU_RS08365	0.65	-2.6
1,871,379	+		PFLU_RS08365	0.65	-1.1
1,871,379	+		PFLU_RS08365	0.65	-0.0
1,871,379	+		PFLU_RS08365	0.65	-0.1
1,871,380	-		PFLU_RS08365	0.66	-1.9
1,871,380	-		PFLU_RS08365	0.66	-1.2
1,871,380	-		PFLU_RS08365	0.66	-2.5
1,871,380	-		PFLU_RS08365	0.66	-1.3
1,871,380	-		PFLU_RS08365	0.66	+0.8
1,871,380	-		PFLU_RS08365	0.66	-0.6
1,871,380	-		PFLU_RS08365	0.66	-2.4
1,871,380	-		PFLU_RS08365	0.66	+0.6
1,871,455	+		PFLU_RS08365	0.73	-0.2
1,871,455	+		PFLU_RS08365	0.73	-0.1
1,871,455	+		PFLU_RS08365	0.73	-0.2
1,871,455	+		PFLU_RS08365	0.73	-0.6
1,871,455	+		PFLU_RS08365	0.73	-2.0
1,871,455	+		PFLU_RS08365	0.73	-2.1
1,871,455	+		PFLU_RS08365	0.73	-1.6
1,871,455	+		PFLU_RS08365	0.73	+0.0
1,871,455	+		PFLU_RS08365	0.73	+0.8
1,871,455	+		PFLU_RS08365	0.73	-0.3
1,871,455	+		PFLU_RS08365	0.73	-2.1
1,871,455	+		PFLU_RS08365	0.73	-2.3
1,871,456	-		PFLU_RS08365	0.73	-2.1
1,871,456	-		PFLU_RS08365	0.73	-0.0
1,871,456	-		PFLU_RS08365	0.73	-1.3
1,871,456	-		PFLU_RS08365	0.73	-1.9
1,871,456	-		PFLU_RS08365	0.73	-1.3
1,871,456	-		PFLU_RS08365	0.73	-1.3
1,871,456	-		PFLU_RS08365	0.73	+0.6
1,871,456	-		PFLU_RS08365	0.73	+0.6
1,871,456	-		PFLU_RS08365	0.73	-2.1
1,871,456	-		PFLU_RS08365	0.73	-1.6
1,871,485	+		PFLU_RS08365	0.76	-1.2
1,871,485	+		PFLU_RS08365	0.76	-0.3
1,871,485	+		PFLU_RS08365	0.76	-3.1
1,871,485	+		PFLU_RS08365	0.76	-0.9
1,871,485	+		PFLU_RS08365	0.76	-0.6
1,871,486	-		PFLU_RS08365	0.77	-2.8
1,871,486	-		PFLU_RS08365	0.77	-2.5
1,871,486	-		PFLU_RS08365	0.77	-2.8
1,871,499	+		PFLU_RS08365	0.78	-2.0
1,871,499	+		PFLU_RS08365	0.78	-1.5
1,871,499	+		PFLU_RS08365	0.78	-3.4
1,871,499	+		PFLU_RS08365	0.78	-1.6
1,871,500	-		PFLU_RS08365	0.78	-2.0
1,871,500	-		PFLU_RS08365	0.78	+0.7
1,871,520	+		PFLU_RS08365	0.80	-1.4
1,871,521	-		PFLU_RS08365	0.80	-0.8
1,871,521	-		PFLU_RS08365	0.80	+1.3
1,871,710	+				+0.6
1,871,710	+				-0.4
1,871,710	+				+2.0
1,871,710	+				-1.3
1,871,745	-				-0.4
1,871,745	-				-2.3
1,871,816	-				+0.4
1,871,845	+				-0.6
1,871,845	+				-1.6
1,871,861	+				-2.7
1,871,861	+				+1.0
1,871,861	+				-0.4
1,871,861	+				-1.3
1,871,861	+				-3.1
1,871,862	-				-2.3
1,871,862	-				-1.1
1,871,862	-				-1.8
1,871,862	-				-2.6
1,871,879	-				-1.3
1,871,895	+				-1.8
1,871,896	-				-0.9
1,871,896	-				-1.4
1,871,896	-				-1.8
1,871,896	-				-2.0
1,871,896	-				-1.9
1,871,898	+				-1.3
1,871,898	+				-2.0
1,871,898	+				-2.6
1,871,898	+				-2.3
1,871,898	+				-2.8
1,871,898	+				-2.2
1,871,898	+				-0.3
1,871,898	+				+0.1
1,871,899	-				-1.6
1,871,899	-				-1.6
1,871,899	-				-1.4
1,871,899	-				-1.9
1,871,899	-				-2.8
1,871,899	-				-3.4
1,871,923	+		PFLU_RS08370	0.10	-1.8
1,871,923	+		PFLU_RS08370	0.10	-1.8
1,871,924	-		PFLU_RS08370	0.11	-2.6
1,871,924	-		PFLU_RS08370	0.11	-2.4
1,871,924	-		PFLU_RS08370	0.11	-0.0
1,871,924	-		PFLU_RS08370	0.11	-2.8
1,871,924	-		PFLU_RS08370	0.11	-0.8
1,871,998	+		PFLU_RS08370	0.40	-0.0
1,872,003	+		PFLU_RS08370	0.42	-2.4
1,872,172	+				-1.3
1,872,173	-				-1.3
1,872,173	-				-2.4
1,872,175	+				-0.8
1,872,175	+				-0.0
1,872,175	+				-2.5
1,872,175	+				-0.8
1,872,175	+				-0.4
1,872,175	+				-0.9
1,872,175	+				-2.1
1,872,175	+				-1.3
1,872,175	+				-2.4
1,872,175	+				-0.4
1,872,175	+				-2.4
1,872,175	+				-0.9
1,872,175	+				+0.3
1,872,176	-				-2.1
1,872,176	-				-0.7
1,872,176	-				-1.3
1,872,176	-				+0.1
1,872,176	-				-0.9
1,872,183	+				-2.8
1,872,183	+				+0.6
1,872,183	+				-1.3
1,872,183	+				-0.9
1,872,184	-				-0.4
1,872,184	-				-2.7
1,872,184	-				-2.8
1,872,184	-				-1.0
1,872,201	+				-0.4
1,872,201	+				-2.2
1,872,201	+				+0.2
1,872,202	-				-1.4
1,872,202	-				+0.5
1,872,202	-				-2.2
1,872,213	+				-2.1
1,872,213	+				-2.8
1,872,213	+				-0.6
1,872,213	+				-0.9
1,872,213	+				-1.1
1,872,213	+				+0.9
1,872,213	+				+2.0
1,872,213	+				+0.3
1,872,213	+				-1.6
1,872,214	-				-1.6
1,872,214	-				-2.5
1,872,214	-				-3.4
1,872,217	+				-0.0
1,872,217	+				-1.8
1,872,217	+				-1.9
1,872,217	+				-1.3
1,872,217	+				-2.3
1,872,217	+				-2.5
1,872,217	+				-0.6
1,872,217	+				-0.8
1,872,217	+				-1.8
1,872,217	+				-1.9
1,872,217	+				-3.4
1,872,217	+				-2.5
1,872,217	+				-1.8
1,872,218	-				-2.6
1,872,218	-				-0.3
1,872,218	-				-2.0
1,872,218	-				-3.3
1,872,218	-				-1.3
1,872,218	-				-3.4
1,872,218	-				-2.3
1,872,218	-				+1.2
1,872,218	-				-2.8
1,872,218	-				-2.1
1,872,218	-				-1.4
1,872,218	-				-0.3
1,872,218	-				-1.0
1,872,218	-				-1.4
1,872,218	-				+0.1
1,872,218	-				-1.3
1,872,218	-				-0.9
1,872,218	-				-0.8
1,872,218	-				-1.3
1,872,218	-				-2.6
1,872,220	+				-2.5
1,872,221	-				-0.8
1,872,221	-				-1.4
1,872,227	+				-1.6
1,872,227	+				-0.3
1,872,227	+				-2.0
1,872,228	-				-0.0
1,872,228	-				-0.3
1,872,228	-				+0.2
1,872,233	+				-3.7
1,872,233	+				-1.0
1,872,233	+				-1.3
1,872,233	+				-1.4
1,872,233	+				-0.1
1,872,233	+				-1.3
1,872,233	+				+0.3
1,872,233	+				-2.4
1,872,234	-				-2.6
1,872,234	-				-1.4
1,872,234	-				-2.1
1,872,234	-				+0.4
1,872,234	-				-1.4
1,872,234	-				-1.9
1,872,236	+				-0.0
1,872,237	-				-2.8
1,872,237	-				-1.3
1,872,237	-				-0.2
1,872,240	+				-0.0
1,872,240	+				-2.4
1,872,241	-				-0.0
1,872,241	-				-2.2
1,872,241	-				-2.2
1,872,250	+				+0.9
1,872,251	-				+0.7
1,872,286	+				+0.9
1,872,286	+				-1.9
1,872,287	-				+0.1
1,872,287	-				+1.6
1,872,313	+				+0.6
1,872,385	+				-2.5
1,872,385	+				+0.8
1,872,385	+				+0.7
1,872,385	+				+3.3
1,872,386	-				-0.1
1,872,386	-				+2.0
1,872,386	-				+1.2
1,872,386	-				-2.0
1,872,386	-				+2.1
1,872,394	+				-1.6
1,872,394	+				+0.6
1,872,415	-				-0.1
1,872,474	+				-0.6
1,872,474	+				-0.4
1,872,474	+				+0.2
1,872,474	+				-0.0
1,872,474	+				-0.0
1,872,474	+				+0.2
1,872,474	+				-0.2
1,872,474	+				-2.1
1,872,474	+				-1.0
1,872,474	+				-4.0
1,872,474	+				-3.0
1,872,475	-				+1.2
1,872,475	-				-1.3
1,872,475	-				+0.4
1,872,475	-				+1.4
1,872,475	-				-0.7
1,872,475	-				-3.3
1,872,475	-				-2.3
1,872,475	-				+0.1
1,872,475	-				+0.4
1,872,475	-				+1.2
1,872,475	-				-1.3
1,872,487	-				+0.3
1,872,487	-				+0.5
1,872,565	+				-1.1
1,872,565	+				-2.6
1,872,565	+				-3.0
1,872,565	+				-0.2
1,872,565	+				+0.5
1,872,565	+				-2.4
1,872,565	+				+0.2
1,872,565	+				+0.3
1,872,565	+				-0.1
1,872,565	+				-1.0
1,872,565	+				+0.8
1,872,565	+				-1.1
1,872,565	+				-1.6
1,872,565	+				-0.0
1,872,566	-				-0.4
1,872,566	-				+0.6
1,872,566	-				+1.8
1,872,566	-				-1.3
1,872,566	-				-1.3
1,872,566	-				-0.1
1,872,566	-				+1.3
1,872,566	-				-1.4
1,872,566	-				+0.7
1,872,566	-				+1.1
1,872,566	-				+1.7
1,872,624	+				-0.8
1,872,624	+				+0.4
1,872,624	+				-1.0
1,872,624	+				-1.9
1,872,624	+				-0.4
1,872,624	+				-1.3
1,872,624	+				-1.5
1,872,624	+				-1.6
1,872,625	-				-0.8
1,872,625	-				+1.7
1,872,625	-				-1.9
1,872,625	-				+1.2
1,872,627	+				-1.1
1,872,627	+				+0.0
1,872,627	+				-0.6
1,872,627	+				-0.2
1,872,627	+				-0.8
1,872,627	+				+0.5
1,872,627	+				+3.7
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