Strain Fitness in Pantoea sp. MT58 around IAI47_17795

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
3,778,445	+		IAI47_17790	0.81	+2.5
3,778,445	+		IAI47_17790	0.81	-0.2
3,778,454	+		IAI47_17790	0.83	-0.9
3,778,454	+		IAI47_17790	0.83	+0.0
3,778,455	-		IAI47_17790	0.83	+1.2
3,778,455	-		IAI47_17790	0.83	+1.4
3,778,468	+		IAI47_17790	0.87	+0.9
3,778,468	+		IAI47_17790	0.87	-0.2
3,778,468	+		IAI47_17790	0.87	+0.2
3,778,469	-		IAI47_17790	0.87	+0.1
3,778,469	-		IAI47_17790	0.87	-1.9
3,778,469	-		IAI47_17790	0.87	+0.4
3,778,469	-		IAI47_17790	0.87	+1.0
3,778,469	-		IAI47_17790	0.87	+0.9
3,778,469	-		IAI47_17790	0.87	-2.2
3,778,469	-		IAI47_17790	0.87	+2.7
3,778,472	+		IAI47_17790	0.88	-1.7
3,778,472	+		IAI47_17790	0.88	+0.5
3,778,473	-		IAI47_17790	0.88	+0.9
3,778,488	+				+0.4
3,778,488	+				-0.4
3,778,488	+				-0.6
3,778,488	+				-2.0
3,778,489	-				-0.9
3,778,549	-				-0.9
3,778,591	-				+0.4
3,778,626	+				-0.2
3,778,626	+				-0.4
3,778,627	-				-2.0
3,778,627	-				-0.5
3,778,627	-				-0.3
3,778,627	-				-0.4
3,778,627	-				-0.0
3,778,629	-				-3.6
3,778,632	+				+1.2
3,778,632	+				-0.4
3,778,633	-				+0.0
3,778,651	+				+0.9
3,778,671	-				-0.6
3,778,705	+				-1.4
3,778,705	+				+0.1
3,778,754	+				+0.9
3,778,754	+				+1.2
3,778,759	-				+0.5
3,778,765	+				-0.1
3,778,766	-				-1.2
3,778,766	-				-1.0
3,778,766	-				+0.9
3,778,788	+				+0.9
3,778,789	-				+1.3
3,778,801	+				+2.0
3,778,804	+				-3.3
3,778,807	+				+0.5
3,778,808	-				-0.4
3,778,808	-				-1.0
3,778,856	-				-0.1
3,778,856	-				+0.4
3,778,911	+				-1.1
3,778,945	+				+0.2
3,778,977	-				-1.6
3,779,087	+				+0.9
3,779,130	+				-2.3
3,779,152	+				-0.5
3,779,152	+				-0.8
3,779,153	-				+1.1
3,779,153	-				-4.0
3,779,153	-				+0.0
3,779,153	-				-0.1
3,779,153	-				-1.1
3,779,153	-				-0.1
3,779,185	+				+0.4
3,779,186	-				-1.6
3,779,206	+				-0.4
3,779,206	+				-1.1
3,779,206	+				-3.6
3,779,207	-				-1.7
3,779,248	+				-0.4
3,779,249	+				+2.0
3,779,249	+				-1.3
3,779,249	+				-0.9
3,779,249	+				+0.3
3,779,250	-				+0.7
3,779,250	-				-2.3
3,779,250	-				-0.3
3,779,250	-				-1.9
3,779,250	-				-0.4
3,779,250	-				-0.4
3,779,307	-				+0.5
3,779,309	+				-0.9
3,779,309	+				-0.4
3,779,309	+				-0.4
3,779,310	-				-0.7
3,779,310	-				+1.2
3,779,310	-				+0.3
3,779,343	+				-0.8
3,779,373	+				-0.4
3,779,374	-				-1.6
3,779,374	-				-0.8
3,779,381	-				-2.6
3,779,445	+				-1.2
3,779,446	-				+0.9
3,779,446	-				+0.1
3,779,479	+				+0.6
3,779,480	-				-0.3
3,779,480	-				-2.6
3,779,480	-				-1.0
3,779,482	+				-1.3
3,779,482	+				+0.3
3,779,483	-				+1.3
3,779,618	+		IAI47_17795	0.18	+3.2
3,779,618	+		IAI47_17795	0.18	+0.1
3,779,619	-		IAI47_17795	0.18	-1.1
3,779,619	-		IAI47_17795	0.18	+1.4
3,779,619	-		IAI47_17795	0.18	+0.6
3,779,619	-		IAI47_17795	0.18	+0.6
3,779,654	+		IAI47_17795	0.22	-0.0
3,779,654	+		IAI47_17795	0.22	+0.8
3,779,654	+		IAI47_17795	0.22	+2.4
3,779,654	+		IAI47_17795	0.22	+2.9
3,779,655	-		IAI47_17795	0.22	+0.3
3,779,655	-		IAI47_17795	0.22	+0.9
3,779,655	-		IAI47_17795	0.22	-1.1
3,779,655	-		IAI47_17795	0.22	+1.9
3,779,655	-		IAI47_17795	0.22	+2.5
3,779,704	+		IAI47_17795	0.27	+1.2
3,779,705	-		IAI47_17795	0.27	+3.0
3,779,705	-		IAI47_17795	0.27	+0.3
3,779,705	-		IAI47_17795	0.27	+3.4
3,779,705	-		IAI47_17795	0.27	-0.6
3,779,705	-		IAI47_17795	0.27	+1.2
3,779,751	-		IAI47_17795	0.32	+0.1
3,779,781	+		IAI47_17795	0.35	-1.5
3,779,781	+		IAI47_17795	0.35	+0.1
3,779,781	+		IAI47_17795	0.35	+1.5
3,779,781	+		IAI47_17795	0.35	+1.2
3,779,781	+		IAI47_17795	0.35	-0.7
3,779,781	+		IAI47_17795	0.35	+0.7
3,779,781	+		IAI47_17795	0.35	+0.1
3,779,781	+		IAI47_17795	0.35	+3.7
3,779,781	+		IAI47_17795	0.35	+0.2
3,779,781	+				+1.9
3,779,781	+		IAI47_17795	0.35	+0.5
3,779,782	-		IAI47_17795	0.35	+1.4
3,779,782	-		IAI47_17795	0.35	+0.8
3,779,782	-		IAI47_17795	0.35	-0.1
3,779,782	-		IAI47_17795	0.35	+1.5
3,779,782	-		IAI47_17795	0.35	+1.7
3,779,782	-		IAI47_17795	0.35	+0.2
3,779,782	-		IAI47_17795	0.35	+0.2
3,779,876	-		IAI47_17795	0.45	+1.0
3,779,903	+		IAI47_17795	0.48	+0.3
3,779,903	+		IAI47_17795	0.48	+1.4
3,779,904	-		IAI47_17795	0.48	-0.8
3,779,904	-		IAI47_17795	0.48	+2.7
3,779,926	+		IAI47_17795	0.50	+0.3
3,779,926	+		IAI47_17795	0.50	+1.2
3,779,927	-		IAI47_17795	0.50	-0.7
3,779,927	-		IAI47_17795	0.50	-0.8
3,779,927	-		IAI47_17795	0.50	-2.8
3,779,927	-		IAI47_17795	0.50	+0.1
3,779,927	-		IAI47_17795	0.50	+0.2
3,779,927	-		IAI47_17795	0.50	+1.5
3,779,937	+		IAI47_17795	0.51	+2.2
3,779,938	-		IAI47_17795	0.51	+0.2
3,779,938	-		IAI47_17795	0.51	+0.6
3,779,987	+		IAI47_17795	0.57	-1.4
3,779,996	+		IAI47_17795	0.57	+1.3
3,779,996	+		IAI47_17795	0.57	-0.2
3,779,996	+		IAI47_17795	0.57	+2.6
3,779,997	-		IAI47_17795	0.58	-2.6
3,779,997	-		IAI47_17795	0.58	-0.1
3,780,112	+		IAI47_17795	0.70	-2.3
3,780,112	+		IAI47_17795	0.70	+0.1
3,780,113	-		IAI47_17795	0.70	+0.5
3,780,168	+		IAI47_17795	0.75	+0.8
3,780,168	+		IAI47_17795	0.75	-0.6
3,780,169	-		IAI47_17795	0.76	+1.5
3,780,169	-		IAI47_17795	0.76	-1.7
3,780,171	+		IAI47_17795	0.76	+0.4
3,780,171	+		IAI47_17795	0.76	-0.3
3,780,171	+		IAI47_17795	0.76	-0.2
3,780,171	+		IAI47_17795	0.76	+0.7
3,780,171	+		IAI47_17795	0.76	+0.1
3,780,171	+		IAI47_17795	0.76	+1.0
3,780,171	+		IAI47_17795	0.76	+1.1
3,780,172	-		IAI47_17795	0.76	-1.4
3,780,172	-		IAI47_17795	0.76	-0.3
3,780,172	-		IAI47_17795	0.76	+1.5
3,780,172	-		IAI47_17795	0.76	+1.3
3,780,172	-		IAI47_17795	0.76	-1.2
3,780,172	-		IAI47_17795	0.76	-1.9
3,780,200	+		IAI47_17795	0.79	-1.1
3,780,201	-		IAI47_17795	0.79	+0.3
3,780,291	+		IAI47_17795	0.88	-2.1
3,780,291	+		IAI47_17795	0.88	+0.8
3,780,291	+		IAI47_17795	0.88	+0.9
3,780,291	+		IAI47_17795	0.88	+0.4
3,780,291	+		IAI47_17795	0.88	-0.4
3,780,291	+		IAI47_17795	0.88	-0.0
3,780,292	-		IAI47_17795	0.88	+1.3
3,780,292	-		IAI47_17795	0.88	+0.3
3,780,292	-		IAI47_17795	0.88	+1.8
3,780,292	-		IAI47_17795	0.88	-2.0
3,780,292	-		IAI47_17795	0.88	+0.2
3,780,292	-		IAI47_17795	0.88	-0.4
3,780,415	+				+0.9
3,780,415	+				+0.3
3,780,415	+				+1.6
3,780,415	+				-1.6
3,780,415	+				+1.0
3,780,415	+				-2.0
3,780,415	+				-0.2
3,780,415	+				+0.5
3,780,415	+				+0.1
3,780,415	+				+1.1
3,780,415	+				-1.0
3,780,415	+				+1.2
3,780,415	+				+0.2
3,780,415	+				+0.2
3,780,415	+				+1.5
3,780,415	+				-0.1
3,780,415	+				-3.1
3,780,415	+				-0.9
3,780,415	+				+2.2
3,780,415	+				+1.0
3,780,416	-				-1.4
3,780,416	-				+0.4
3,780,416	-				-0.9
3,780,416	-				-0.4
3,780,416	-				+0.4
3,780,416	-				+2.1
3,780,416	-				-0.0
3,780,416	-				+0.3
3,780,416	-				-2.6
3,780,416	-				-0.4
3,780,416	-				+1.9
3,780,416	-				-1.1
3,780,416	-				-1.6
3,780,417	+				-0.4
3,780,417	+				-2.5
3,780,417	+				-0.4
3,780,418	-				-2.8
3,780,418	-				-0.5
3,780,418	-				-3.1
3,780,418	-				+0.6
3,780,418	-				+2.7
3,780,418	-				-0.4
3,780,418	-				-2.1
3,780,419	+				+0.4
3,780,419	+				+0.5
3,780,419	+				-2.0
3,780,419	+				-1.0
3,780,419	+				+0.2
3,780,420	-				+1.1
3,780,420	-				-0.1
3,780,464	-				+0.9
3,780,464	-				-3.5
3,780,464	-				-1.8
3,780,464	-				+1.3
3,780,479	+				+0.8
3,780,479	+				-2.5
3,780,568	+		IAI47_17800	0.11	-0.9
3,780,632	+		IAI47_17800	0.18	-1.3
3,780,632	+		IAI47_17800	0.18	+0.9
3,780,633	-		IAI47_17800	0.18	+1.9
3,780,633	-		IAI47_17800	0.18	+2.4
3,780,674	+		IAI47_17800	0.23	+1.1
3,780,675	-		IAI47_17800	0.23	-2.4
3,780,675	-		IAI47_17800	0.23	-2.2
3,780,781	+		IAI47_17800	0.36	+0.9
3,780,782	-		IAI47_17800	0.36	+0.4
3,780,966	+		IAI47_17800	0.59	-0.8
3,780,966	+		IAI47_17800	0.59	+0.9
3,780,967	-		IAI47_17800	0.59	+0.8
3,781,019	+		IAI47_17800	0.65	-1.9
3,781,019	+		IAI47_17800	0.65	-1.1
3,781,019	+		IAI47_17800	0.65	-1.8
3,781,019	+		IAI47_17800	0.65	+0.1
3,781,019	+		IAI47_17800	0.65	-0.5
3,781,113	+		IAI47_17800	0.76	-1.5
3,781,113	+		IAI47_17800	0.76	+2.9
3,781,113	+		IAI47_17800	0.76	+2.4
3,781,114	-		IAI47_17800	0.76	+2.2
3,781,114	-		IAI47_17800	0.76	-2.9
3,781,114	-		IAI47_17800	0.76	-0.2
3,781,115	+		IAI47_17800	0.77	-2.3
3,781,115	+		IAI47_17800	0.77	+0.8
3,781,115	+		IAI47_17800	0.77	-1.6
3,781,115	+		IAI47_17800	0.77	-0.6
3,781,116	-		IAI47_17800	0.77	-3.1
3,781,116	-		IAI47_17800	0.77	-0.6
3,781,116	-		IAI47_17800	0.77	-0.3
3,781,116	-		IAI47_17800	0.77	+1.0
3,781,116	-		IAI47_17800	0.77	-1.3
3,781,159	-		IAI47_17800	0.82	+0.5
3,781,185	+		IAI47_17800	0.85	-0.1
3,781,202	+		IAI47_17800	0.87	+0.5
3,781,203	-		IAI47_17800	0.87	-0.3
3,781,224	-		IAI47_17800	0.90	+0.2
3,781,320	+				-2.1
3,781,320	+				+0.9
3,781,320	+				-1.2
3,781,325	-				-0.1
3,781,336	+				+0.3
3,781,376	+				+1.2
3,781,377	-				+1.0
3,781,377	-				-2.9
3,781,377	-				-2.5
3,781,395	-				+0.1
3,781,395	-				+0.1
3,781,395	-				+1.9
3,781,395	-				+0.3
3,781,395	-				-0.3
3,781,395	-				-3.8
3,781,395	-				+1.1