Strain Fitness in Pantoea sp. MT58 around IAI47_13625

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,889,696	+		IAI47_13620	0.72	-0.9
2,889,696	+		IAI47_13620	0.72	+0.5
2,889,710	+		IAI47_13620	0.73	+0.4
2,889,711	-		IAI47_13620	0.73	-2.3
2,889,879	+		IAI47_13620	0.78	+2.2
2,889,979	+		IAI47_13620	0.81	-1.1
2,889,979	+		IAI47_13620	0.81	+0.4
2,889,979	+		IAI47_13620	0.81	+0.2
2,889,979	+		IAI47_13620	0.81	+2.0
2,889,980	-		IAI47_13620	0.81	-1.7
2,889,980	-		IAI47_13620	0.81	-1.7
2,889,980	-		IAI47_13620	0.81	-0.3
2,890,041	-		IAI47_13620	0.83	+0.2
2,890,086	-		IAI47_13620	0.85	+1.4
2,890,143	-		IAI47_13620	0.87	+0.6
2,890,163	+		IAI47_13620	0.87	-0.8
2,890,400	+				+1.2
2,890,455	-				-2.7
2,890,455	-				-0.1
2,890,455	-				+2.5
2,890,490	+				+1.8
2,890,491	-				-1.3
2,890,496	+				-2.8
2,890,499	+				+0.2
2,890,499	+				+1.9
2,890,499	+				+0.2
2,890,499	+				+1.7
2,890,500	-				-2.8
2,890,500	-				-1.4
2,890,500	-				-2.0
2,890,500	-				-0.1
2,890,500	-				+0.6
2,890,500	-				-1.4
2,890,500	-				-0.9
2,890,500	-				+0.2
2,890,500	-				-1.0
2,890,502	+				+0.7
2,890,503	-				-2.6
2,890,535	-				+0.3
2,890,535	-				+1.3
2,890,543	+				+1.0
2,890,543	+				-0.4
2,890,543	+				-2.3
2,890,544	-				-2.0
2,890,544	-				-3.1
2,890,544	-				-0.6
2,890,544	-				+1.4
2,890,556	-				+1.0
2,890,556	-				-1.3
2,890,567	+				+1.1
2,890,571	-				-2.3
2,890,571	-				+0.6
2,890,681	+		IAI47_13625	0.15	-2.5
2,890,681	+		IAI47_13625	0.15	-2.8
2,890,682	-		IAI47_13625	0.15	-1.4
2,890,682	-		IAI47_13625	0.15	+2.4
2,890,682	-		IAI47_13625	0.15	+0.2
2,890,682	-		IAI47_13625	0.15	-1.3
2,890,682	-		IAI47_13625	0.15	-2.7
2,890,741	+		IAI47_13625	0.21	-1.3
2,890,799	-		IAI47_13625	0.27	-0.6
2,890,799	-		IAI47_13625	0.27	-2.1
2,890,799	-		IAI47_13625	0.27	+0.1
2,890,801	+		IAI47_13625	0.27	-1.9
2,890,825	+		IAI47_13625	0.29	-3.3
2,890,826	-		IAI47_13625	0.30	+0.4
2,891,046	+		IAI47_13625	0.52	-3.0
2,891,047	-		IAI47_13625	0.52	-2.3
2,891,047	-		IAI47_13625	0.52	-2.3
2,891,047	-		IAI47_13625	0.52	+0.2
2,891,050	+		IAI47_13625	0.52	-0.3
2,891,050	+		IAI47_13625	0.52	-1.4
2,891,050	+		IAI47_13625	0.52	-0.3
2,891,050	+		IAI47_13625	0.52	-1.0
2,891,050	+		IAI47_13625	0.52	-1.0
2,891,051	-		IAI47_13625	0.52	-1.5
2,891,051	-		IAI47_13625	0.52	-1.4
2,891,051	-		IAI47_13625	0.52	-1.3
2,891,052	+		IAI47_13625	0.53	-1.5
2,891,052	+				+1.7
2,891,053	-		IAI47_13625	0.53	-1.6
2,891,053	-		IAI47_13625	0.53	+3.6
2,891,053	-		IAI47_13625	0.53	-0.8
2,891,085	+		IAI47_13625	0.56	+1.7
2,891,115	+		IAI47_13625	0.59	-1.1
2,891,116	-		IAI47_13625	0.59	-3.2
2,891,116	-		IAI47_13625	0.59	+0.2
2,891,116	-		IAI47_13625	0.59	+0.9
2,891,116	-		IAI47_13625	0.59	-1.8
2,891,157	+		IAI47_13625	0.63	-1.3
2,891,309	+		IAI47_13625	0.79	+1.3
2,891,345	+		IAI47_13625	0.82	-1.7
2,891,345	+		IAI47_13625	0.82	-2.4
2,891,346	-		IAI47_13625	0.82	-0.6
2,891,346	-		IAI47_13625	0.82	-3.1
2,891,346	-		IAI47_13625	0.82	-0.8
2,891,360	+		IAI47_13625	0.84	-3.0
2,891,361	-		IAI47_13625	0.84	-1.3
2,891,361	-		IAI47_13625	0.84	+1.0
2,891,361	-		IAI47_13625	0.84	-1.6
2,891,361	-		IAI47_13625	0.84	+1.7
2,891,361	-		IAI47_13625	0.84	-3.6
2,891,361	-		IAI47_13625	0.84	-1.0
2,891,393	+		IAI47_13625	0.87	-0.3
2,891,394	-		IAI47_13625	0.87	+0.5
2,891,565	+				-0.7
2,891,565	+				-0.3
2,891,565	+				-0.3
2,891,565	+				+1.9
2,891,565	+				-1.1
2,891,565	+				+0.6
2,891,565	+				+0.9
2,891,565	+				+0.7
2,891,566	-				+0.0
2,891,566	-				-0.8
2,891,566	-				-0.6
2,891,566	-				+0.2
2,891,566	-				+0.9
2,891,566	-				-0.4
2,891,566	-				+2.1
2,891,566	-				-1.3
2,891,566	-				-0.3
2,891,566	-				+0.2
2,891,603	+		IAI47_13630	0.13	-0.3
2,891,604	-		IAI47_13630	0.13	-0.7
2,891,604	-		IAI47_13630	0.13	-0.1
2,891,621	+		IAI47_13630	0.15	-1.1
2,891,621	+		IAI47_13630	0.15	-0.3
2,891,621	+		IAI47_13630	0.15	+1.5
2,891,621	+		IAI47_13630	0.15	+1.5
2,891,622	-		IAI47_13630	0.15	+0.1
2,891,622	-		IAI47_13630	0.15	-1.6
2,891,622	-		IAI47_13630	0.15	-0.6
2,891,622	-		IAI47_13630	0.15	-0.9
2,891,622	-		IAI47_13630	0.15	+0.9
2,891,653	-		IAI47_13630	0.20	+1.2
2,891,693	+		IAI47_13630	0.25	+1.9
2,891,693	+		IAI47_13630	0.25	-0.8
2,891,693	+		IAI47_13630	0.25	+0.9
2,891,693	+		IAI47_13630	0.25	-0.9
2,891,693	+		IAI47_13630	0.25	+0.1
2,891,693	+		IAI47_13630	0.25	+0.2
2,891,694	-		IAI47_13630	0.25	+2.6
2,891,724	+		IAI47_13630	0.29	+3.7
2,891,724	+		IAI47_13630	0.29	+1.5
2,891,724	+		IAI47_13630	0.29	+0.9
2,891,724	+		IAI47_13630	0.29	-0.6
2,891,724	+		IAI47_13630	0.29	+0.3
2,891,834	-		IAI47_13630	0.45	+1.7
2,891,856	+		IAI47_13630	0.48	+0.5
2,891,857	-		IAI47_13630	0.48	-0.0
2,891,858	+		IAI47_13630	0.48	+0.4
2,891,858	+		IAI47_13630	0.48	-0.3
2,891,858	+		IAI47_13630	0.48	+0.7
2,891,858	+		IAI47_13630	0.48	+0.7
2,891,858	+		IAI47_13630	0.48	-0.3
2,891,858	+		IAI47_13630	0.48	+0.0
2,891,858	+		IAI47_13630	0.48	+0.2
2,891,858	+		IAI47_13630	0.48	-3.4
2,891,859	-		IAI47_13630	0.48	-3.3
2,891,859	-		IAI47_13630	0.48	+0.7
2,891,859	-		IAI47_13630	0.48	+1.3
2,891,859	-		IAI47_13630	0.48	-1.1
2,891,859	-		IAI47_13630	0.48	-0.8
2,891,859	-		IAI47_13630	0.48	+0.4
2,891,859	-		IAI47_13630	0.48	-2.2
2,891,859	-		IAI47_13630	0.48	+1.7
2,891,859	-		IAI47_13630	0.48	-1.8
2,891,859	-		IAI47_13630	0.48	+4.8
2,891,978	+		IAI47_13630	0.64	-0.5
2,891,988	-		IAI47_13630	0.66	+1.0
2,892,032	+		IAI47_13630	0.72	-0.4
2,892,032	+		IAI47_13630	0.72	-0.6
2,892,032	+		IAI47_13630	0.72	-4.0
2,892,033	-		IAI47_13630	0.72	+0.9
2,892,075	+		IAI47_13630	0.78	-0.4
2,892,092	+		IAI47_13630	0.80	-0.7
2,892,092	+		IAI47_13630	0.80	-3.4
2,892,126	+		IAI47_13630	0.85	-0.3
2,892,126	+		IAI47_13630	0.85	-0.0
2,892,126	+		IAI47_13630	0.85	-0.8
2,892,126	+		IAI47_13630	0.85	-2.1
2,892,126	+		IAI47_13630	0.85	+0.6
2,892,126	+		IAI47_13630	0.85	-0.3
2,892,126	+		IAI47_13630	0.85	+0.0
2,892,127	-		IAI47_13630	0.85	-1.3
2,892,127	-		IAI47_13630	0.85	-1.2
2,892,127	-		IAI47_13630	0.85	-4.1
2,892,127	-		IAI47_13630	0.85	-1.8
2,892,133	+		IAI47_13630	0.86	-0.6
2,892,133	+		IAI47_13630	0.86	-3.1
2,892,133	+		IAI47_13630	0.86	-3.6
2,892,134	-		IAI47_13630	0.86	+0.8
2,892,134	-		IAI47_13630	0.86	+0.2
2,892,176	+				-1.8
2,892,198	+				-0.8
2,892,198	+				+0.8
2,892,199	-				-1.3
2,892,199	-				-1.1
2,892,199	-				-0.8
2,892,210	+				-2.0
2,892,211	-				-0.8
2,892,211	-				+0.5
2,892,213	+				-0.3
2,892,213	+				-0.2
2,892,213	+				-0.3
2,892,213	+				+1.5
2,892,213	+				+0.9
2,892,213	+				+0.0
2,892,213	+				+1.2
2,892,214	-				-0.4
2,892,214	-				+1.0
2,892,214	-				-2.5
2,892,214	-				+0.7
2,892,214	-				-2.0
2,892,214	-				+0.7
2,892,214	-				-1.8
2,892,259	+				-0.7
2,892,285	-				+0.3
2,892,303	+				-2.6
2,892,303	+				+0.8
2,892,303	+				+0.2
2,892,303	+				-1.4
2,892,304	-				+1.0
2,892,304	-				-1.0
2,892,304	-				+0.4
2,892,315	-				-1.0
2,892,404	+		IAI47_13635	0.14	+0.7
2,892,405	-		IAI47_13635	0.14	-2.0
2,892,405	-		IAI47_13635	0.14	-1.6