Strain Fitness in Pantoea sp. MT58 around IAI47_12125

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,568,066	+		IAI47_12120	0.53	-2.2
2,568,073	+		IAI47_12120	0.54	-3.6
2,568,073	+		IAI47_12120	0.54	-1.0
2,568,074	-		IAI47_12120	0.54	+0.0
2,568,076	+		IAI47_12120	0.54	-1.4
2,568,076	+		IAI47_12120	0.54	+0.8
2,568,077	-		IAI47_12120	0.54	-0.7
2,568,077	-		IAI47_12120	0.54	+2.6
2,568,077	-		IAI47_12120	0.54	+0.0
2,568,137	+		IAI47_12120	0.57	+0.8
2,568,138	-		IAI47_12120	0.58	-1.5
2,568,206	+		IAI47_12120	0.62	+0.1
2,568,206	+		IAI47_12120	0.62	-2.0
2,568,206	+		IAI47_12120	0.62	+1.6
2,568,207	-		IAI47_12120	0.62	+0.7
2,568,207	-		IAI47_12120	0.62	+1.4
2,568,207	-		IAI47_12120	0.62	+1.1
2,568,207	-		IAI47_12120	0.62	-1.5
2,568,207	-		IAI47_12120	0.62	-0.7
2,568,211	+		IAI47_12120	0.62	-3.4
2,568,211	+		IAI47_12120	0.62	+0.6
2,568,212	-		IAI47_12120	0.62	-1.0
2,568,212	-		IAI47_12120	0.62	-0.4
2,568,221	-		IAI47_12120	0.63	-0.3
2,568,242	-		IAI47_12120	0.64	-1.2
2,568,256	+		IAI47_12120	0.65	-2.2
2,568,257	-		IAI47_12120	0.65	+0.6
2,568,257	-		IAI47_12120	0.65	+0.1
2,568,278	-		IAI47_12120	0.66	+0.2
2,568,322	+		IAI47_12120	0.69	+0.0
2,568,322	+		IAI47_12120	0.69	-1.8
2,568,379	+		IAI47_12120	0.72	-0.1
2,568,379	+		IAI47_12120	0.72	-1.4
2,568,380	-		IAI47_12120	0.72	-0.1
2,568,380	-		IAI47_12120	0.72	-0.9
2,568,380	-		IAI47_12120	0.72	-0.2
2,568,390	+		IAI47_12120	0.73	-2.3
2,568,390	+		IAI47_12120	0.73	-0.1
2,568,493	+		IAI47_12120	0.79	+1.0
2,568,494	-		IAI47_12120	0.79	-3.5
2,568,494	-		IAI47_12120	0.79	+0.0
2,568,496	+		IAI47_12120	0.79	-2.4
2,568,496	+		IAI47_12120	0.79	-1.2
2,568,496	+		IAI47_12120	0.79	+3.5
2,568,497	-		IAI47_12120	0.79	+2.6
2,568,497	-		IAI47_12120	0.79	-0.4
2,568,497	-		IAI47_12120	0.79	-1.0
2,568,594	+		IAI47_12120	0.85	+0.0
2,568,595	-		IAI47_12120	0.85	-0.1
2,568,595	-		IAI47_12120	0.85	-3.4
2,568,614	+		IAI47_12120	0.86	+0.1
2,568,628	+		IAI47_12120	0.87	+1.8
2,568,628	+		IAI47_12120	0.87	-0.4
2,568,628	+		IAI47_12120	0.87	-2.8
2,568,628	+		IAI47_12120	0.87	-0.8
2,568,629	-		IAI47_12120	0.87	+0.3
2,568,629	-		IAI47_12120	0.87	+0.4
2,568,629	-		IAI47_12120	0.87	-0.4
2,568,639	+		IAI47_12120	0.88	-1.4
2,568,639	+		IAI47_12120	0.88	+0.3
2,568,639	+		IAI47_12120	0.88	+0.8
2,568,640	-		IAI47_12120	0.88	-2.6
2,568,640	-		IAI47_12120	0.88	-0.4
2,568,640	-		IAI47_12120	0.88	+0.2
2,568,640	-		IAI47_12120	0.88	-0.4
2,568,640	-		IAI47_12120	0.88	-1.2
2,568,640	-		IAI47_12120	0.88	-2.0
2,568,650	+		IAI47_12120	0.89	+0.8
2,568,651	-		IAI47_12120	0.89	-0.9
2,568,651	-		IAI47_12120	0.89	-2.0
2,568,662	-		IAI47_12120	0.89	+3.2
2,568,662	-		IAI47_12120	0.89	-1.3
2,568,678	+				-1.8
2,568,679	-				+0.3
2,568,681	+				+0.6
2,568,681	+				-1.0
2,568,681	+				-0.0
2,568,681	+				+0.1
2,568,681	+				-1.2
2,568,681	+				-0.5
2,568,681	+				-1.7
2,568,681	+				+0.6
2,568,681	+				-0.7
2,568,681	+				+2.6
2,568,681	+				-3.0
2,568,681	+				+2.7
2,568,681	+				+1.3
2,568,681	+				-2.7
2,568,682	-				-2.0
2,568,682	-				-1.8
2,568,682	-				-0.0
2,568,682	-				+0.7
2,568,682	-				-1.1
2,568,682	-				-1.2
2,568,701	-				-1.7
2,568,764	-				+0.8
2,568,769	+				+1.8
2,568,769	+				+1.2
2,568,823	+				-0.1
2,568,824	-				+1.4
2,568,824	-				-2.5
2,568,824	-				+0.6
2,568,827	+				+1.0
2,568,827	+				+0.0
2,568,828	-				-1.3
2,568,828	-				-0.9
2,568,828	-				-3.4
2,568,828	-				-1.1
2,568,828	-				-1.5
2,568,828	-				-0.6
2,568,828	-				-0.1
2,568,828	-				-1.0
2,568,828	-				+0.7
2,568,828	-				-0.2
2,568,849	+				+0.8
2,568,849	+				+1.6
2,568,849	+				+1.6
2,568,849	+				-1.0
2,568,850	-				-1.4
2,568,850	-				-2.0
2,568,850	-				-3.0
2,568,850	-				+0.8
2,568,850	-				+1.0
2,568,850	-				+2.1
2,568,915	+				-1.1
2,568,915	+				-1.9
2,568,916	-				+1.5
2,568,917	+				-1.8
2,568,917	+				-1.4
2,568,917	+				-0.4
2,568,918	-				-1.0
2,568,918	-				-0.5
2,568,918	-				-2.1
2,568,938	+				+1.2
2,568,938	+				+1.7
2,568,938	+				+0.2
2,568,939	-				+0.5
2,568,939	-				+3.2
2,568,939	-				-0.7
2,568,939	-				-0.1
2,568,939	-				-1.2
2,568,939	-				+1.7
2,568,980	-				-0.4
2,568,980	-				-2.8
2,568,990	+				-1.2
2,568,991	-				+1.0
2,569,016	-				-2.5
2,569,016	-				+1.4
2,569,056	+				+2.0
2,569,056	+				+1.4
2,569,056	+				-1.7
2,569,056	+				+3.7
2,569,057	-				+2.3
2,569,088	+		IAI47_12125	0.13	+1.3
2,569,137	+		IAI47_12125	0.18	+1.6
2,569,138	-		IAI47_12125	0.18	+0.7
2,569,167	+		IAI47_12125	0.21	-0.1
2,569,167	+		IAI47_12125	0.21	+0.5
2,569,168	-		IAI47_12125	0.21	-0.3
2,569,168	-		IAI47_12125	0.21	-0.7
2,569,168	-		IAI47_12125	0.21	-0.3
2,569,168	-		IAI47_12125	0.21	-0.2
2,569,168	-		IAI47_12125	0.21	-0.8
2,569,188	+		IAI47_12125	0.23	+0.3
2,569,188	+		IAI47_12125	0.23	+2.1
2,569,188	+		IAI47_12125	0.23	+1.3
2,569,189	-		IAI47_12125	0.24	+0.7
2,569,195	+		IAI47_12125	0.24	+0.7
2,569,195	+		IAI47_12125	0.24	+0.2
2,569,195	+		IAI47_12125	0.24	-1.5
2,569,195	+		IAI47_12125	0.24	+1.6
2,569,195	+		IAI47_12125	0.24	+2.2
2,569,196	-		IAI47_12125	0.24	-2.0
2,569,196	-		IAI47_12125	0.24	+2.5
2,569,196	-		IAI47_12125	0.24	+0.8
2,569,197	+		IAI47_12125	0.24	+0.9
2,569,197	+		IAI47_12125	0.24	+1.8
2,569,197	+		IAI47_12125	0.24	+1.4
2,569,198	-		IAI47_12125	0.25	-1.4
2,569,198	-		IAI47_12125	0.25	-0.3
2,569,198	-		IAI47_12125	0.25	+0.0
2,569,243	-		IAI47_12125	0.29	+0.8
2,569,294	+		IAI47_12125	0.34	+1.6
2,569,311	+		IAI47_12125	0.36	+0.9
2,569,312	-		IAI47_12125	0.36	-0.2
2,569,312	-		IAI47_12125	0.36	-0.4
2,569,312	-		IAI47_12125	0.36	-2.7
2,569,513	+		IAI47_12125	0.57	+0.3
2,569,573	+		IAI47_12125	0.63	-1.5
2,569,574	-		IAI47_12125	0.64	-0.6
2,569,574	-		IAI47_12125	0.64	+1.0
2,569,582	+		IAI47_12125	0.64	-0.6
2,569,707	+		IAI47_12125	0.77	-0.7
2,569,707	+		IAI47_12125	0.77	-2.5
2,569,707	+		IAI47_12125	0.77	-0.2
2,569,707	+		IAI47_12125	0.77	+0.6
2,569,708	-		IAI47_12125	0.77	-0.9
2,569,708	-		IAI47_12125	0.77	+0.0
2,569,708	-		IAI47_12125	0.77	+0.5
2,569,708	-		IAI47_12125	0.77	-0.2
2,569,744	+		IAI47_12125	0.81	+1.6
2,569,744	+		IAI47_12125	0.81	+2.8
2,569,745	-		IAI47_12125	0.81	-2.1
2,569,775	-		IAI47_12125	0.84	+1.4
2,569,775	-		IAI47_12125	0.84	+0.0
2,569,775	-		IAI47_12125	0.84	-0.1
2,570,034	+				-0.7
2,570,034	+				-1.0
2,570,034	+				+0.6
2,570,056	-		IAI47_12130	0.12	+0.8
2,570,139	+		IAI47_12130	0.19	-1.4
2,570,139	+		IAI47_12130	0.19	+2.4
2,570,140	-		IAI47_12130	0.19	+0.3
2,570,232	+		IAI47_12130	0.28	+1.3
2,570,295	+		IAI47_12130	0.33	+2.2
2,570,295	+		IAI47_12130	0.33	-1.3
2,570,295	+		IAI47_12130	0.33	-2.0
2,570,295	+		IAI47_12130	0.33	-0.7
2,570,295	+		IAI47_12130	0.33	-1.3
2,570,295	+		IAI47_12130	0.33	-2.2
2,570,295	+		IAI47_12130	0.33	+1.1
2,570,295	+		IAI47_12130	0.33	+1.8
2,570,296	-		IAI47_12130	0.34	-2.8
2,570,296	-		IAI47_12130	0.34	+0.5
2,570,296	-		IAI47_12130	0.34	+0.6
2,570,296	-		IAI47_12130	0.34	-0.2
2,570,337	+		IAI47_12130	0.37	+0.0
2,570,337	+		IAI47_12130	0.37	-0.7
2,570,338	-		IAI47_12130	0.37	+3.2
2,570,338	-		IAI47_12130	0.37	+0.6
2,570,338	-		IAI47_12130	0.37	+0.0
2,570,340	+		IAI47_12130	0.37	+0.4
2,570,340	+		IAI47_12130	0.37	+1.8
2,570,340	+		IAI47_12130	0.37	+0.9
2,570,341	-		IAI47_12130	0.38	+1.2
2,570,341	-		IAI47_12130	0.38	-0.3
2,570,341	-		IAI47_12130	0.38	+1.4
2,570,364	+		IAI47_12130	0.40	+0.7
2,570,424	+		IAI47_12130	0.45	+2.6
2,570,424	+		IAI47_12130	0.45	-0.5
2,570,424	+		IAI47_12130	0.45	+0.8
2,570,425	-		IAI47_12130	0.45	-1.0
2,570,425	-		IAI47_12130	0.45	+0.5
2,570,425	-		IAI47_12130	0.45	+0.4
2,570,425	-		IAI47_12130	0.45	-2.4
2,570,425	-		IAI47_12130	0.45	+1.5
2,570,425	-		IAI47_12130	0.45	+1.5
2,570,425	-		IAI47_12130	0.45	-2.2
2,570,454	+		IAI47_12130	0.48	-0.2
2,570,455	-		IAI47_12130	0.48	-0.4
2,570,455	-		IAI47_12130	0.48	-1.5
2,570,455	-		IAI47_12130	0.48	+0.6
2,570,455	-		IAI47_12130	0.48	+0.9
2,570,509	+		IAI47_12130	0.53	+1.3
2,570,509	+		IAI47_12130	0.53	+2.8
2,570,510	-		IAI47_12130	0.53	-0.8
2,570,510	-		IAI47_12130	0.53	+3.0
2,570,510	-		IAI47_12130	0.53	-0.9
2,570,529	+		IAI47_12130	0.55	+2.0
2,570,529	+		IAI47_12130	0.55	+0.5
2,570,529	+		IAI47_12130	0.55	+2.8
2,570,529	+		IAI47_12130	0.55	+1.2
2,570,530	-		IAI47_12130	0.55	-0.9
2,570,530	-		IAI47_12130	0.55	+0.6
2,570,530	-		IAI47_12130	0.55	+0.6
2,570,601	+		IAI47_12130	0.61	-0.6
2,570,601	+		IAI47_12130	0.61	-0.1
2,570,601	+		IAI47_12130	0.61	-1.7
2,570,601	+		IAI47_12130	0.61	+0.0
2,570,601	+		IAI47_12130	0.61	+0.4
2,570,601	+		IAI47_12130	0.61	-1.7
2,570,601	+		IAI47_12130	0.61	+1.4
2,570,601	+		IAI47_12130	0.61	-2.5
2,570,601	+		IAI47_12130	0.61	-2.0
2,570,602	-		IAI47_12130	0.61	+1.4
2,570,602	-		IAI47_12130	0.61	+1.4
2,570,602	-		IAI47_12130	0.61	+0.9
2,570,602	-		IAI47_12130	0.61	-0.0
2,570,602	-		IAI47_12130	0.61	-0.2
2,570,602	-		IAI47_12130	0.61	+0.5
2,570,602	-		IAI47_12130	0.61	-0.2
2,570,604	+		IAI47_12130	0.61	-0.6
2,570,605	-		IAI47_12130	0.61	+2.0
2,570,631	+		IAI47_12130	0.64	+0.8
2,570,631	+		IAI47_12130	0.64	+1.3
2,570,656	+		IAI47_12130	0.66	-0.4
2,570,656	+		IAI47_12130	0.66	+1.2
2,570,657	-		IAI47_12130	0.66	-0.4
2,570,688	+		IAI47_12130	0.69	+0.3
2,570,808	+		IAI47_12130	0.80	+0.1
2,570,808	+		IAI47_12130	0.80	+1.2
2,570,808	+		IAI47_12130	0.80	+0.2
2,570,809	-		IAI47_12130	0.80	-2.8
2,570,809	-		IAI47_12130	0.80	+0.7
2,570,812	-		IAI47_12130	0.80	-1.0
2,570,848	-		IAI47_12130	0.83	+3.0
2,570,851	-		IAI47_12130	0.84	-0.7
2,570,851	-		IAI47_12130	0.84	+0.8
2,570,851	-		IAI47_12130	0.84	+2.8