Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27880 and BWI76_RS27885 overlap by 4 nucleotides BWI76_RS27885 and BWI76_RS27890 are separated by 341 nucleotides
BWI76_RS27880: BWI76_RS27880 - 6-phospho-alpha-glucosidase, at 5,781,523 to 5,782,845
_RS27880
BWI76_RS27885: BWI76_RS27885 - PTS alpha-glucoside transporter subunit IICB, at 5,782,842 to 5,784,464
_RS27885
BWI76_RS27890: BWI76_RS27890 - GntR family transcriptional regulator, at 5,784,806 to 5,785,552
_RS27890
Position (kb)
5782
5783
5784
5785 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5782.010 kb on + strand, within BWI76_RS27880 at 5782.044 kb on + strand, within BWI76_RS27880 at 5782.052 kb on - strand, within BWI76_RS27880 at 5782.053 kb on - strand, within BWI76_RS27880 at 5782.105 kb on - strand, within BWI76_RS27880 at 5782.191 kb on + strand, within BWI76_RS27880 at 5782.262 kb on - strand, within BWI76_RS27880 at 5782.295 kb on - strand, within BWI76_RS27880 at 5782.295 kb on - strand, within BWI76_RS27880 at 5782.404 kb on + strand, within BWI76_RS27880 at 5782.462 kb on + strand, within BWI76_RS27880 at 5782.643 kb on - strand, within BWI76_RS27880 at 5782.695 kb on + strand, within BWI76_RS27880 at 5782.716 kb on - strand at 5782.797 kb on + strand at 5782.797 kb on + strand at 5782.797 kb on + strand at 5782.805 kb on - strand at 5782.874 kb on - strand at 5782.900 kb on + strand at 5782.927 kb on - strand at 5782.967 kb on + strand at 5783.053 kb on + strand, within BWI76_RS27885 at 5783.053 kb on - strand, within BWI76_RS27885 at 5783.207 kb on + strand, within BWI76_RS27885 at 5783.215 kb on - strand, within BWI76_RS27885 at 5783.215 kb on - strand, within BWI76_RS27885 at 5783.393 kb on - strand, within BWI76_RS27885 at 5783.424 kb on - strand, within BWI76_RS27885 at 5783.515 kb on - strand, within BWI76_RS27885 at 5783.527 kb on - strand, within BWI76_RS27885 at 5783.527 kb on - strand, within BWI76_RS27885 at 5783.625 kb on - strand, within BWI76_RS27885 at 5783.628 kb on - strand, within BWI76_RS27885 at 5783.638 kb on - strand, within BWI76_RS27885 at 5783.745 kb on + strand, within BWI76_RS27885 at 5783.828 kb on + strand, within BWI76_RS27885 at 5783.855 kb on - strand, within BWI76_RS27885 at 5783.855 kb on - strand, within BWI76_RS27885 at 5783.876 kb on - strand, within BWI76_RS27885 at 5783.884 kb on - strand, within BWI76_RS27885 at 5783.942 kb on - strand, within BWI76_RS27885 at 5784.000 kb on + strand, within BWI76_RS27885 at 5784.141 kb on + strand, within BWI76_RS27885 at 5784.218 kb on - strand, within BWI76_RS27885 at 5784.224 kb on - strand, within BWI76_RS27885 at 5784.301 kb on - strand, within BWI76_RS27885 at 5784.327 kb on + strand at 5784.379 kb on - strand at 5784.429 kb on - strand at 5784.486 kb on + strand at 5784.501 kb on + strand at 5784.501 kb on + strand at 5784.501 kb on + strand at 5784.501 kb on + strand at 5784.509 kb on - strand at 5784.542 kb on + strand at 5784.683 kb on - strand at 5784.699 kb on + strand at 5784.699 kb on + strand at 5784.699 kb on + strand at 5784.699 kb on + strand at 5784.699 kb on + strand at 5784.707 kb on - strand at 5784.707 kb on - strand at 5784.707 kb on - strand at 5784.707 kb on - strand at 5784.790 kb on + strand at 5784.866 kb on - strand at 5784.957 kb on + strand, within BWI76_RS27890 at 5785.018 kb on - strand, within BWI76_RS27890 at 5785.066 kb on + strand, within BWI76_RS27890 at 5785.096 kb on - strand, within BWI76_RS27890 at 5785.301 kb on + strand, within BWI76_RS27890 at 5785.399 kb on + strand, within BWI76_RS27890 at 5785.446 kb on + strand, within BWI76_RS27890
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 5,782,010 + BWI76_RS27880 0.37 +1.9 5,782,044 + BWI76_RS27880 0.39 -0.4 5,782,052 - BWI76_RS27880 0.40 -0.3 5,782,053 - BWI76_RS27880 0.40 +0.6 5,782,105 - BWI76_RS27880 0.44 +0.7 5,782,191 + BWI76_RS27880 0.50 -0.2 5,782,262 - BWI76_RS27880 0.56 -0.9 5,782,295 - BWI76_RS27880 0.58 -0.3 5,782,295 - BWI76_RS27880 0.58 -1.4 5,782,404 + BWI76_RS27880 0.67 +0.3 5,782,462 + BWI76_RS27880 0.71 -0.8 5,782,643 - BWI76_RS27880 0.85 -0.6 5,782,695 + BWI76_RS27880 0.89 +1.2 5,782,716 - -0.3 5,782,797 + -0.2 5,782,797 + -0.2 5,782,797 + -0.5 5,782,805 - -0.6 5,782,874 - +0.1 5,782,900 + +0.0 5,782,927 - +0.8 5,782,967 + -0.4 5,783,053 + BWI76_RS27885 0.13 +0.6 5,783,053 - BWI76_RS27885 0.13 +0.1 5,783,207 + BWI76_RS27885 0.22 +0.1 5,783,215 - BWI76_RS27885 0.23 -0.2 5,783,215 - BWI76_RS27885 0.23 -0.0 5,783,393 - BWI76_RS27885 0.34 -0.0 5,783,424 - BWI76_RS27885 0.36 -0.5 5,783,515 - BWI76_RS27885 0.41 -0.1 5,783,527 - BWI76_RS27885 0.42 -0.7 5,783,527 - BWI76_RS27885 0.42 -1.2 5,783,625 - BWI76_RS27885 0.48 -0.0 5,783,628 - BWI76_RS27885 0.48 -0.4 5,783,638 - BWI76_RS27885 0.49 +1.0 5,783,745 + BWI76_RS27885 0.56 -0.1 5,783,828 + BWI76_RS27885 0.61 -1.9 5,783,855 - BWI76_RS27885 0.62 -0.4 5,783,855 - BWI76_RS27885 0.62 -1.3 5,783,876 - BWI76_RS27885 0.64 -1.2 5,783,884 - BWI76_RS27885 0.64 -2.1 5,783,942 - BWI76_RS27885 0.68 +0.2 5,784,000 + BWI76_RS27885 0.71 +0.0 5,784,141 + BWI76_RS27885 0.80 +0.3 5,784,218 - BWI76_RS27885 0.85 -0.6 5,784,224 - BWI76_RS27885 0.85 +0.0 5,784,301 - BWI76_RS27885 0.90 +0.3 5,784,327 + -1.0 5,784,379 - +0.4 5,784,429 - -0.4 5,784,486 + +0.0 5,784,501 + -2.3 5,784,501 + +0.0 5,784,501 + +0.0 5,784,501 + +1.8 5,784,509 - -0.5 5,784,542 + -1.3 5,784,683 - +0.7 5,784,699 + -0.4 5,784,699 + -0.3 5,784,699 + -0.4 5,784,699 + -0.7 5,784,699 + +0.1 5,784,707 - +0.2 5,784,707 - +0.1 5,784,707 - +0.6 5,784,707 - +1.1 5,784,790 + -0.1 5,784,866 - -0.4 5,784,957 + BWI76_RS27890 0.20 -1.4 5,785,018 - BWI76_RS27890 0.28 -0.2 5,785,066 + BWI76_RS27890 0.35 +0.7 5,785,096 - BWI76_RS27890 0.39 +0.3 5,785,301 + BWI76_RS27890 0.66 +0.6 5,785,399 + BWI76_RS27890 0.79 -0.7 5,785,446 + BWI76_RS27890 0.86 -0.4
Or see this region's nucleotide sequence