Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27005

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27000 and BWI76_RS27005 are separated by 127 nucleotidesBWI76_RS27005 and BWI76_RS27010 are separated by 180 nucleotides BWI76_RS27000: BWI76_RS27000 - glycine--tRNA ligase subunit alpha, at 5,601,904 to 5,602,815 _RS27000 BWI76_RS27005: BWI76_RS27005 - hypothetical protein, at 5,602,943 to 5,603,248 _RS27005 BWI76_RS27010: BWI76_RS27010 - O-acetyltransferase, at 5,603,429 to 5,604,424 _RS27010 Position (kb) 5602 5603 5604Strain fitness (log2 ratio) -2 -1 0 1 2at 5603.077 kb on + strand, within BWI76_RS27005at 5603.080 kb on - strand, within BWI76_RS27005at 5603.085 kb on - strand, within BWI76_RS27005at 5603.100 kb on + strand, within BWI76_RS27005at 5603.183 kb on - strand, within BWI76_RS27005at 5603.191 kb on + strand, within BWI76_RS27005at 5603.331 kb on - strandat 5603.400 kb on - strandat 5603.492 kb on + strandat 5603.529 kb on + strand, within BWI76_RS27010at 5603.537 kb on - strand, within BWI76_RS27010at 5603.701 kb on + strand, within BWI76_RS27010at 5603.701 kb on + strand, within BWI76_RS27010at 5603.725 kb on + strand, within BWI76_RS27010at 5603.725 kb on + strand, within BWI76_RS27010at 5603.733 kb on - strand, within BWI76_RS27010at 5603.733 kb on - strand, within BWI76_RS27010at 5603.835 kb on - strand, within BWI76_RS27010at 5603.896 kb on + strand, within BWI76_RS27010at 5603.904 kb on - strand, within BWI76_RS27010at 5603.969 kb on - strand, within BWI76_RS27010at 5603.990 kb on + strand, within BWI76_RS27010at 5603.998 kb on - strand, within BWI76_RS27010at 5604.043 kb on + strand, within BWI76_RS27010at 5604.053 kb on + strand, within BWI76_RS27010at 5604.056 kb on - strand, within BWI76_RS27010at 5604.061 kb on - strand, within BWI76_RS27010at 5604.061 kb on - strand, within BWI76_RS27010at 5604.061 kb on - strand, within BWI76_RS27010at 5604.203 kb on - strandat 5604.210 kb on + strand, within BWI76_RS27010

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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5,603,077 + BWI76_RS27005 0.44 -0.0
5,603,080 - BWI76_RS27005 0.45 +0.9
5,603,085 - BWI76_RS27005 0.46 +0.3
5,603,100 + BWI76_RS27005 0.51 +0.4
5,603,183 - BWI76_RS27005 0.78 +0.1
5,603,191 + BWI76_RS27005 0.81 +0.8
5,603,331 - +1.1
5,603,400 - +0.4
5,603,492 + -0.0
5,603,529 + BWI76_RS27010 0.10 -0.1
5,603,537 - BWI76_RS27010 0.11 +0.1
5,603,701 + BWI76_RS27010 0.27 -0.2
5,603,701 + BWI76_RS27010 0.27 -0.3
5,603,725 + BWI76_RS27010 0.30 -0.7
5,603,725 + BWI76_RS27010 0.30 +0.2
5,603,733 - BWI76_RS27010 0.31 -1.8
5,603,733 - BWI76_RS27010 0.31 -0.9
5,603,835 - BWI76_RS27010 0.41 +0.0
5,603,896 + BWI76_RS27010 0.47 -0.3
5,603,904 - BWI76_RS27010 0.48 -1.4
5,603,969 - BWI76_RS27010 0.54 -2.0
5,603,990 + BWI76_RS27010 0.56 +0.7
5,603,998 - BWI76_RS27010 0.57 -0.0
5,604,043 + BWI76_RS27010 0.62 +0.3
5,604,053 + BWI76_RS27010 0.63 -0.8
5,604,056 - BWI76_RS27010 0.63 -0.1
5,604,061 - BWI76_RS27010 0.63 -1.2
5,604,061 - BWI76_RS27010 0.63 -0.7
5,604,061 - BWI76_RS27010 0.63 +0.2
5,604,203 - +2.1
5,604,210 + BWI76_RS27010 0.78 +0.1

Or see this region's nucleotide sequence