Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26165

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26160 and BWI76_RS26165 are separated by 10 nucleotidesBWI76_RS26165 and BWI76_RS26170 are separated by 619 nucleotides BWI76_RS26160: BWI76_RS26160 - 4-alpha-glucanotransferase (EC 2.4.1.25) (from data), at 5,405,233 to 5,407,326 _RS26160 BWI76_RS26165: BWI76_RS26165 - Glycogen phosphorylase (EC 2.4.1.1) (from data), at 5,407,337 to 5,409,727 _RS26165 BWI76_RS26170: BWI76_RS26170 - transcriptional regulator MalT, at 5,410,347 to 5,413,052 _RS26170 Position (kb) 5407 5408 5409 5410Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 5406.362 kb on + strand, within BWI76_RS26160at 5406.370 kb on - strand, within BWI76_RS26160at 5406.370 kb on - strand, within BWI76_RS26160at 5406.377 kb on + strand, within BWI76_RS26160at 5406.546 kb on + strand, within BWI76_RS26160at 5406.561 kb on + strand, within BWI76_RS26160at 5406.644 kb on + strand, within BWI76_RS26160at 5406.719 kb on - strand, within BWI76_RS26160at 5406.858 kb on - strand, within BWI76_RS26160at 5406.869 kb on + strand, within BWI76_RS26160at 5406.877 kb on - strand, within BWI76_RS26160at 5407.250 kb on + strandat 5407.323 kb on + strandat 5407.329 kb on - strandat 5407.389 kb on + strandat 5407.433 kb on + strandat 5407.619 kb on - strand, within BWI76_RS26165at 5407.657 kb on - strand, within BWI76_RS26165at 5407.835 kb on - strand, within BWI76_RS26165at 5407.854 kb on + strandat 5408.072 kb on - strand, within BWI76_RS26165at 5408.092 kb on - strand, within BWI76_RS26165at 5408.093 kb on + strand, within BWI76_RS26165at 5408.223 kb on - strand, within BWI76_RS26165at 5408.223 kb on - strand, within BWI76_RS26165at 5408.340 kb on + strand, within BWI76_RS26165at 5408.410 kb on + strand, within BWI76_RS26165at 5408.453 kb on + strand, within BWI76_RS26165at 5408.498 kb on + strand, within BWI76_RS26165at 5408.651 kb on + strand, within BWI76_RS26165at 5408.835 kb on + strand, within BWI76_RS26165at 5408.860 kb on + strand, within BWI76_RS26165at 5408.875 kb on + strand, within BWI76_RS26165at 5409.037 kb on + strand, within BWI76_RS26165at 5409.180 kb on - strand, within BWI76_RS26165at 5409.238 kb on - strand, within BWI76_RS26165at 5409.284 kb on - strand, within BWI76_RS26165at 5409.392 kb on + strand, within BWI76_RS26165at 5409.400 kb on - strand, within BWI76_RS26165at 5409.424 kb on + strand, within BWI76_RS26165at 5409.441 kb on - strand, within BWI76_RS26165at 5409.469 kb on + strand, within BWI76_RS26165at 5409.632 kb on - strandat 5409.642 kb on - strandat 5409.698 kb on - strandat 5409.758 kb on + strandat 5409.797 kb on + strandat 5409.804 kb on - strandat 5409.826 kb on - strandat 5409.840 kb on + strandat 5409.855 kb on + strandat 5409.863 kb on - strandat 5409.863 kb on - strandat 5409.917 kb on - strandat 5409.930 kb on - strandat 5409.931 kb on - strandat 5409.931 kb on - strandat 5409.956 kb on + strandat 5409.956 kb on - strandat 5410.035 kb on - strandat 5410.159 kb on - strandat 5410.159 kb on - strandat 5410.207 kb on - strandat 5410.207 kb on - strandat 5410.217 kb on + strandat 5410.269 kb on + strandat 5410.322 kb on + strandat 5410.322 kb on + strandat 5410.322 kb on + strandat 5410.322 kb on + strandat 5410.327 kb on + strandat 5410.330 kb on - strandat 5410.345 kb on - strandat 5410.347 kb on + strandat 5410.366 kb on - strandat 5410.366 kb on - strandat 5410.370 kb on - strandat 5410.371 kb on + strandat 5410.372 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.381 kb on + strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.389 kb on - strandat 5410.390 kb on + strandat 5410.390 kb on + strandat 5410.390 kb on + strandat 5410.390 kb on + strandat 5410.391 kb on + strandat 5410.391 kb on + strandat 5410.391 kb on + strandat 5410.391 kb on + strandat 5410.391 kb on + strandat 5410.399 kb on - strandat 5410.410 kb on - strandat 5410.436 kb on + strandat 5410.452 kb on + strandat 5410.452 kb on + strandat 5410.460 kb on - strandat 5410.470 kb on - strandat 5410.475 kb on + strandat 5410.538 kb on + strandat 5410.545 kb on + strandat 5410.560 kb on - strandat 5410.596 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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5,406,362 + BWI76_RS26160 0.54 -2.8
5,406,370 - BWI76_RS26160 0.54 -3.3
5,406,370 - BWI76_RS26160 0.54 -3.7
5,406,377 + BWI76_RS26160 0.55 -3.6
5,406,546 + BWI76_RS26160 0.63 -2.5
5,406,561 + BWI76_RS26160 0.63 -3.0
5,406,644 + BWI76_RS26160 0.67 -3.9
5,406,719 - BWI76_RS26160 0.71 -6.0
5,406,858 - BWI76_RS26160 0.78 -6.0
5,406,869 + BWI76_RS26160 0.78 -4.0
5,406,877 - BWI76_RS26160 0.79 -4.6
5,407,250 + -3.9
5,407,323 + -2.3
5,407,329 - -2.0
5,407,389 + -1.8
5,407,433 + -4.6
5,407,619 - BWI76_RS26165 0.12 -4.7
5,407,657 - BWI76_RS26165 0.13 -2.4
5,407,835 - BWI76_RS26165 0.21 -1.6
5,407,854 + +1.2
5,408,072 - BWI76_RS26165 0.31 -2.6
5,408,092 - BWI76_RS26165 0.32 -1.4
5,408,093 + BWI76_RS26165 0.32 -2.3
5,408,223 - BWI76_RS26165 0.37 -3.8
5,408,223 - BWI76_RS26165 0.37 -4.1
5,408,340 + BWI76_RS26165 0.42 -2.6
5,408,410 + BWI76_RS26165 0.45 -2.9
5,408,453 + BWI76_RS26165 0.47 -1.5
5,408,498 + BWI76_RS26165 0.49 -4.3
5,408,651 + BWI76_RS26165 0.55 -5.1
5,408,835 + BWI76_RS26165 0.63 -2.7
5,408,860 + BWI76_RS26165 0.64 -2.9
5,408,875 + BWI76_RS26165 0.64 -5.1
5,409,037 + BWI76_RS26165 0.71 -3.5
5,409,180 - BWI76_RS26165 0.77 -4.5
5,409,238 - BWI76_RS26165 0.80 -3.6
5,409,284 - BWI76_RS26165 0.81 -4.2
5,409,392 + BWI76_RS26165 0.86 -5.8
5,409,400 - BWI76_RS26165 0.86 -3.2
5,409,424 + BWI76_RS26165 0.87 -4.6
5,409,441 - BWI76_RS26165 0.88 -3.4
5,409,469 + BWI76_RS26165 0.89 -4.7
5,409,632 - -1.9
5,409,642 - -4.8
5,409,698 - +1.2
5,409,758 + -2.0
5,409,797 + -3.4
5,409,804 - -3.8
5,409,826 - -3.3
5,409,840 + +0.1
5,409,855 + -1.2
5,409,863 - -2.3
5,409,863 - -0.9
5,409,917 - +1.2
5,409,930 - -0.2
5,409,931 - -0.6
5,409,931 - -0.2
5,409,956 + +0.1
5,409,956 - -0.6
5,410,035 - +0.2
5,410,159 - +0.7
5,410,159 - +0.6
5,410,207 - +1.2
5,410,207 - +0.9
5,410,217 + -1.6
5,410,269 + -1.9
5,410,322 + -0.8
5,410,322 + -4.1
5,410,322 + -2.1
5,410,322 + -2.6
5,410,327 + -2.7
5,410,330 - -2.0
5,410,345 - -0.8
5,410,347 + -3.7
5,410,366 - +0.4
5,410,366 - -3.1
5,410,370 - -1.6
5,410,371 + -2.2
5,410,372 + -3.5
5,410,381 + -1.6
5,410,381 + -1.9
5,410,381 + -3.5
5,410,381 + -3.3
5,410,381 + -2.3
5,410,381 + -3.5
5,410,381 + -2.2
5,410,381 + -3.2
5,410,381 + -4.2
5,410,381 + -1.7
5,410,381 + -2.9
5,410,381 + -1.2
5,410,381 + -2.9
5,410,381 + -1.0
5,410,381 + -1.8
5,410,381 + -3.1
5,410,381 + -2.0
5,410,381 + -2.0
5,410,381 + -1.8
5,410,381 + -1.6
5,410,381 + -3.8
5,410,381 + -1.0
5,410,381 + -1.8
5,410,381 + -3.2
5,410,381 + -2.4
5,410,381 + -1.0
5,410,381 + -2.8
5,410,381 + -3.6
5,410,381 + -2.3
5,410,381 + -2.5
5,410,381 + -2.7
5,410,381 + -2.6
5,410,381 + -1.8
5,410,381 + -0.4
5,410,381 + -1.3
5,410,381 + -1.5
5,410,381 + -1.8
5,410,381 + -3.2
5,410,381 + -1.8
5,410,389 - -1.5
5,410,389 - -3.5
5,410,389 - -2.7
5,410,389 - -0.5
5,410,389 - -1.8
5,410,389 - +0.7
5,410,389 - -1.9
5,410,389 - -2.7
5,410,389 - +0.2
5,410,389 - -1.4
5,410,389 - -2.3
5,410,389 - -1.2
5,410,389 - -2.8
5,410,389 - -2.5
5,410,389 - -2.5
5,410,389 - -2.3
5,410,389 - -0.4
5,410,389 - -1.4
5,410,389 - -0.8
5,410,389 - -1.2
5,410,389 - -2.0
5,410,389 - -2.9
5,410,389 - -2.6
5,410,389 - -2.1
5,410,389 - -4.2
5,410,389 - -0.8
5,410,389 - -2.2
5,410,389 - -3.3
5,410,389 - -2.6
5,410,389 - -1.0
5,410,389 - -2.9
5,410,389 - -1.9
5,410,389 - -2.0
5,410,389 - -2.9
5,410,389 - -3.7
5,410,389 - -1.1
5,410,389 - +0.4
5,410,389 - -3.6
5,410,389 - -2.9
5,410,389 - -3.5
5,410,389 - -4.0
5,410,389 - -1.8
5,410,389 - -1.2
5,410,390 + -3.4
5,410,390 + +1.2
5,410,390 + -3.0
5,410,390 + -2.5
5,410,391 + -2.7
5,410,391 + -1.5
5,410,391 + -3.6
5,410,391 + -2.5
5,410,391 + -0.6
5,410,399 - -2.2
5,410,410 - -0.4
5,410,436 + -2.9
5,410,452 + -3.4
5,410,452 + -2.9
5,410,460 - -2.3
5,410,470 - -3.4
5,410,475 + -1.4
5,410,538 + -1.4
5,410,545 + -1.4
5,410,560 - -2.2
5,410,596 - -2.1

Or see this region's nucleotide sequence