Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26160

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26155 and BWI76_RS26160 are separated by 58 nucleotidesBWI76_RS26160 and BWI76_RS26165 are separated by 10 nucleotides BWI76_RS26155: BWI76_RS26155 - phosphoenolpyruvate carboxykinase (ATP), at 5,403,552 to 5,405,174 _RS26155 BWI76_RS26160: BWI76_RS26160 - 4-alpha-glucanotransferase (EC 2.4.1.25) (from data), at 5,405,233 to 5,407,326 _RS26160 BWI76_RS26165: BWI76_RS26165 - Glycogen phosphorylase (EC 2.4.1.1) (from data), at 5,407,337 to 5,409,727 _RS26165 Position (kb) 5405 5406 5407 5408Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 5404.239 kb on + strand, within BWI76_RS26155at 5404.247 kb on - strand, within BWI76_RS26155at 5404.312 kb on + strand, within BWI76_RS26155at 5404.689 kb on + strand, within BWI76_RS26155at 5404.947 kb on + strand, within BWI76_RS26155at 5404.981 kb on + strand, within BWI76_RS26155at 5405.039 kb on + strandat 5405.145 kb on + strandat 5405.266 kb on - strandat 5405.319 kb on + strandat 5405.338 kb on - strandat 5405.593 kb on + strand, within BWI76_RS26160at 5405.621 kb on - strand, within BWI76_RS26160at 5405.840 kb on - strand, within BWI76_RS26160at 5405.847 kb on + strand, within BWI76_RS26160at 5405.916 kb on - strand, within BWI76_RS26160at 5406.167 kb on + strand, within BWI76_RS26160at 5406.222 kb on + strand, within BWI76_RS26160at 5406.362 kb on + strand, within BWI76_RS26160at 5406.370 kb on - strand, within BWI76_RS26160at 5406.370 kb on - strand, within BWI76_RS26160at 5406.377 kb on + strand, within BWI76_RS26160at 5406.546 kb on + strand, within BWI76_RS26160at 5406.561 kb on + strand, within BWI76_RS26160at 5406.644 kb on + strand, within BWI76_RS26160at 5406.719 kb on - strand, within BWI76_RS26160at 5406.858 kb on - strand, within BWI76_RS26160at 5406.869 kb on + strand, within BWI76_RS26160at 5406.877 kb on - strand, within BWI76_RS26160at 5407.250 kb on + strandat 5407.323 kb on + strandat 5407.329 kb on - strandat 5407.389 kb on + strandat 5407.433 kb on + strandat 5407.619 kb on - strand, within BWI76_RS26165at 5407.657 kb on - strand, within BWI76_RS26165at 5407.835 kb on - strand, within BWI76_RS26165at 5407.854 kb on + strandat 5408.072 kb on - strand, within BWI76_RS26165at 5408.092 kb on - strand, within BWI76_RS26165at 5408.093 kb on + strand, within BWI76_RS26165at 5408.223 kb on - strand, within BWI76_RS26165at 5408.223 kb on - strand, within BWI76_RS26165

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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5,404,239 + BWI76_RS26155 0.42 -1.0
5,404,247 - BWI76_RS26155 0.43 -0.4
5,404,312 + BWI76_RS26155 0.47 -0.6
5,404,689 + BWI76_RS26155 0.70 -0.3
5,404,947 + BWI76_RS26155 0.86 +0.0
5,404,981 + BWI76_RS26155 0.88 -0.9
5,405,039 + -0.2
5,405,145 + +1.4
5,405,266 - -2.9
5,405,319 + -3.2
5,405,338 - -1.7
5,405,593 + BWI76_RS26160 0.17 -4.2
5,405,621 - BWI76_RS26160 0.19 -4.6
5,405,840 - BWI76_RS26160 0.29 -3.6
5,405,847 + BWI76_RS26160 0.29 -4.6
5,405,916 - BWI76_RS26160 0.33 -3.5
5,406,167 + BWI76_RS26160 0.45 -2.2
5,406,222 + BWI76_RS26160 0.47 -2.0
5,406,362 + BWI76_RS26160 0.54 -2.8
5,406,370 - BWI76_RS26160 0.54 -3.3
5,406,370 - BWI76_RS26160 0.54 -3.7
5,406,377 + BWI76_RS26160 0.55 -3.6
5,406,546 + BWI76_RS26160 0.63 -2.5
5,406,561 + BWI76_RS26160 0.63 -3.0
5,406,644 + BWI76_RS26160 0.67 -3.9
5,406,719 - BWI76_RS26160 0.71 -6.0
5,406,858 - BWI76_RS26160 0.78 -6.0
5,406,869 + BWI76_RS26160 0.78 -4.0
5,406,877 - BWI76_RS26160 0.79 -4.6
5,407,250 + -3.9
5,407,323 + -2.3
5,407,329 - -2.0
5,407,389 + -1.8
5,407,433 + -4.6
5,407,619 - BWI76_RS26165 0.12 -4.7
5,407,657 - BWI76_RS26165 0.13 -2.4
5,407,835 - BWI76_RS26165 0.21 -1.6
5,407,854 + +1.2
5,408,072 - BWI76_RS26165 0.31 -2.6
5,408,092 - BWI76_RS26165 0.32 -1.4
5,408,093 + BWI76_RS26165 0.32 -2.3
5,408,223 - BWI76_RS26165 0.37 -3.8
5,408,223 - BWI76_RS26165 0.37 -4.1

Or see this region's nucleotide sequence