Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16565 and BWI76_RS16570 are separated by 19 nucleotides BWI76_RS16570 and BWI76_RS16575 are separated by 71 nucleotides BWI76_RS16575 and BWI76_RS16580 overlap by 1 nucleotides
BWI76_RS16565: BWI76_RS16565 - YciE/YciF family protein, at 3,431,165 to 3,431,671
_RS16565
BWI76_RS16570: BWI76_RS16570 - catalase, at 3,431,691 to 3,432,563
_RS16570
BWI76_RS16575: BWI76_RS16575 - cytochrome ubiquinol oxidase subunit I, at 3,432,635 to 3,434,038
_RS16575
BWI76_RS16580: BWI76_RS16580 - ubiquinol oxidase subunit II, at 3,434,038 to 3,435,048
_RS16580
Position (kb)
3432
3433
3434
3435 Strain fitness (log2 ratio)
-1
0
1
2 at 3431.648 kb on + strand at 3431.712 kb on + strand at 3431.783 kb on + strand, within BWI76_RS16570 at 3431.792 kb on - strand, within BWI76_RS16570 at 3431.825 kb on + strand, within BWI76_RS16570 at 3431.984 kb on - strand, within BWI76_RS16570 at 3432.079 kb on - strand, within BWI76_RS16570 at 3432.204 kb on - strand, within BWI76_RS16570 at 3432.481 kb on - strand at 3432.481 kb on - strand at 3432.481 kb on - strand at 3432.609 kb on - strand at 3432.610 kb on + strand at 3432.659 kb on - strand at 3432.761 kb on - strand at 3432.876 kb on - strand, within BWI76_RS16575 at 3433.005 kb on + strand, within BWI76_RS16575 at 3433.136 kb on + strand, within BWI76_RS16575 at 3433.334 kb on - strand at 3433.826 kb on - strand, within BWI76_RS16575 at 3433.837 kb on + strand, within BWI76_RS16575 at 3433.885 kb on + strand, within BWI76_RS16575 at 3433.893 kb on - strand, within BWI76_RS16575 at 3434.224 kb on - strand, within BWI76_RS16580 at 3434.417 kb on + strand, within BWI76_RS16580 at 3434.425 kb on - strand, within BWI76_RS16580 at 3434.464 kb on - strand, within BWI76_RS16580 at 3434.785 kb on - strand, within BWI76_RS16580 at 3434.796 kb on + strand, within BWI76_RS16580 at 3434.990 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,431,648 + -1.0 3,431,712 + -0.0 3,431,783 + BWI76_RS16570 0.11 -0.5 3,431,792 - BWI76_RS16570 0.12 -0.5 3,431,825 + BWI76_RS16570 0.15 -0.2 3,431,984 - BWI76_RS16570 0.34 -0.7 3,432,079 - BWI76_RS16570 0.44 +0.0 3,432,204 - BWI76_RS16570 0.59 +0.7 3,432,481 - -0.1 3,432,481 - +0.0 3,432,481 - +0.2 3,432,609 - -0.9 3,432,610 + +1.0 3,432,659 - +0.9 3,432,761 - +0.1 3,432,876 - BWI76_RS16575 0.17 +2.1 3,433,005 + BWI76_RS16575 0.26 +0.5 3,433,136 + BWI76_RS16575 0.36 +0.4 3,433,334 - -0.0 3,433,826 - BWI76_RS16575 0.85 +1.4 3,433,837 + BWI76_RS16575 0.86 +0.0 3,433,885 + BWI76_RS16575 0.89 -0.2 3,433,893 - BWI76_RS16575 0.90 -0.1 3,434,224 - BWI76_RS16580 0.18 +0.5 3,434,417 + BWI76_RS16580 0.37 -0.3 3,434,425 - BWI76_RS16580 0.38 -0.7 3,434,464 - BWI76_RS16580 0.42 -0.6 3,434,785 - BWI76_RS16580 0.74 -0.4 3,434,796 + BWI76_RS16580 0.75 -0.6 3,434,990 - -0.1
Or see this region's nucleotide sequence