Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13460

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13455 and BWI76_RS13460 are separated by 269 nucleotidesBWI76_RS13460 and BWI76_RS13465 are separated by 16 nucleotidesBWI76_RS13465 and BWI76_RS13470 are separated by 8 nucleotidesBWI76_RS13470 and BWI76_RS13475 overlap by 4 nucleotides BWI76_RS13455: BWI76_RS13455 - salicylaldehyde dehydrogenase, at 2,805,481 to 2,806,914 _RS13455 BWI76_RS13460: BWI76_RS13460 - ABC transporter substrate-binding protein, at 2,807,184 to 2,808,782 _RS13460 BWI76_RS13465: BWI76_RS13465 - hypothetical protein, at 2,808,799 to 2,809,032 _RS13465 BWI76_RS13470: BWI76_RS13470 - transporter, at 2,809,041 to 2,809,490 _RS13470 BWI76_RS13475: BWI76_RS13475 - N-acetyltransferase, at 2,809,487 to 2,810,005 _RS13475 Position (kb) 2807 2808 2809Strain fitness (log2 ratio) -1 0 1at 2806.363 kb on + strand, within BWI76_RS13455at 2806.436 kb on - strand, within BWI76_RS13455at 2806.725 kb on - strand, within BWI76_RS13455at 2806.845 kb on + strandat 2806.883 kb on + strandat 2806.896 kb on - strandat 2807.133 kb on + strandat 2807.182 kb on - strandat 2807.228 kb on + strandat 2807.321 kb on - strandat 2807.460 kb on - strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.470 kb on - strand, within BWI76_RS13460at 2807.541 kb on + strand, within BWI76_RS13460at 2807.737 kb on + strandat 2807.745 kb on - strand, within BWI76_RS13460at 2807.993 kb on - strand, within BWI76_RS13460at 2808.065 kb on + strand, within BWI76_RS13460at 2808.324 kb on + strand, within BWI76_RS13460at 2808.676 kb on + strandat 2808.909 kb on - strand, within BWI76_RS13465at 2809.194 kb on + strand, within BWI76_RS13470at 2809.585 kb on + strandat 2809.723 kb on - strand, within BWI76_RS13475

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,806,363 + BWI76_RS13455 0.62 -0.3
2,806,436 - BWI76_RS13455 0.67 +0.4
2,806,725 - BWI76_RS13455 0.87 +0.4
2,806,845 + -0.1
2,806,883 + +0.8
2,806,896 - -0.5
2,807,133 + -0.6
2,807,182 - -0.4
2,807,228 + +0.5
2,807,321 - -0.7
2,807,460 - BWI76_RS13460 0.17 +0.7
2,807,462 + BWI76_RS13460 0.17 +1.0
2,807,462 + BWI76_RS13460 0.17 -0.0
2,807,462 + BWI76_RS13460 0.17 -0.2
2,807,462 + BWI76_RS13460 0.17 -0.8
2,807,462 + BWI76_RS13460 0.17 +0.4
2,807,470 - BWI76_RS13460 0.18 +0.4
2,807,541 + BWI76_RS13460 0.22 -1.3
2,807,737 + -0.0
2,807,745 - BWI76_RS13460 0.35 -0.6
2,807,993 - BWI76_RS13460 0.51 -0.4
2,808,065 + BWI76_RS13460 0.55 -0.9
2,808,324 + BWI76_RS13460 0.71 -1.5
2,808,676 + +0.8
2,808,909 - BWI76_RS13465 0.47 -1.6
2,809,194 + BWI76_RS13470 0.34 -0.2
2,809,585 + +0.5
2,809,723 - BWI76_RS13475 0.45 -0.1

Or see this region's nucleotide sequence