Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13070

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13065 and BWI76_RS13070 are separated by 47 nucleotidesBWI76_RS13070 and BWI76_RS13075 are separated by 231 nucleotidesBWI76_RS13075 and BWI76_RS13080 are separated by 176 nucleotides BWI76_RS13065: BWI76_RS13065 - LysR family transcriptional regulator, at 2,725,118 to 2,725,993 _RS13065 BWI76_RS13070: BWI76_RS13070 - hypothetical protein, at 2,726,041 to 2,726,268 _RS13070 BWI76_RS13075: BWI76_RS13075 - cupin, at 2,726,500 to 2,726,832 _RS13075 BWI76_RS13080: BWI76_RS13080 - tyramine oxidase, at 2,727,009 to 2,729,267 _RS13080 Position (kb) 2726 2727Strain fitness (log2 ratio) -1 0 1at 2725.215 kb on - strand, within BWI76_RS13065at 2725.217 kb on + strand, within BWI76_RS13065at 2725.261 kb on + strand, within BWI76_RS13065at 2725.342 kb on + strand, within BWI76_RS13065at 2725.387 kb on - strand, within BWI76_RS13065at 2725.668 kb on + strand, within BWI76_RS13065at 2726.069 kb on - strand, within BWI76_RS13070at 2726.205 kb on - strand, within BWI76_RS13070at 2727.014 kb on + strandat 2727.138 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,725,215 - BWI76_RS13065 0.11 -0.4
2,725,217 + BWI76_RS13065 0.11 -0.1
2,725,261 + BWI76_RS13065 0.16 +0.9
2,725,342 + BWI76_RS13065 0.26 -0.3
2,725,387 - BWI76_RS13065 0.31 +0.0
2,725,668 + BWI76_RS13065 0.63 +0.6
2,726,069 - BWI76_RS13070 0.12 -1.6
2,726,205 - BWI76_RS13070 0.72 -0.8
2,727,014 + -0.1
2,727,138 + -0.1

Or see this region's nucleotide sequence