Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08305 and BWI76_RS08310 are separated by 1 nucleotides BWI76_RS08310 and BWI76_RS08315 are separated by 10 nucleotides BWI76_RS08315 and BWI76_RS08320 are separated by 21 nucleotides
BWI76_RS08305: BWI76_RS08305 - two-component sensor histidine kinase, at 1,756,319 to 1,759,006
_RS08305
BWI76_RS08310: BWI76_RS08310 - potassium-transporting ATPase subunit C, at 1,759,008 to 1,759,583
_RS08310
BWI76_RS08315: BWI76_RS08315 - K+-transporting ATPase subunit B, at 1,759,594 to 1,761,642
_RS08315
BWI76_RS08320: BWI76_RS08320 - potassium-transporting ATPase subunit KdpA, at 1,761,664 to 1,763,343
_RS08320
Position (kb)
1759
1760
1761
1762 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1758.614 kb on - strand, within BWI76_RS08305 at 1758.665 kb on + strand, within BWI76_RS08305 at 1758.769 kb on + strand at 1759.041 kb on - strand at 1759.200 kb on - strand, within BWI76_RS08310 at 1759.426 kb on - strand, within BWI76_RS08310 at 1759.606 kb on + strand at 1759.952 kb on - strand, within BWI76_RS08315 at 1760.825 kb on + strand, within BWI76_RS08315 at 1761.348 kb on + strand, within BWI76_RS08315 at 1761.442 kb on - strand at 1761.481 kb on + strand at 1761.591 kb on - strand at 1761.743 kb on + strand at 1761.988 kb on + strand, within BWI76_RS08320 at 1762.134 kb on + strand, within BWI76_RS08320 at 1762.265 kb on + strand, within BWI76_RS08320 at 1762.265 kb on + strand, within BWI76_RS08320
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,758,614 - BWI76_RS08305 0.85 +1.0 1,758,665 + BWI76_RS08305 0.87 +2.9 1,758,769 + -0.1 1,759,041 - +0.0 1,759,200 - BWI76_RS08310 0.33 -0.8 1,759,426 - BWI76_RS08310 0.73 +0.2 1,759,606 + -0.6 1,759,952 - BWI76_RS08315 0.17 -1.3 1,760,825 + BWI76_RS08315 0.60 -1.5 1,761,348 + BWI76_RS08315 0.86 +0.4 1,761,442 - -2.0 1,761,481 + -0.7 1,761,591 - -1.0 1,761,743 + -0.1 1,761,988 + BWI76_RS08320 0.19 -0.5 1,762,134 + BWI76_RS08320 0.28 +2.1 1,762,265 + BWI76_RS08320 0.36 +0.4 1,762,265 + BWI76_RS08320 0.36 -1.3
Or see this region's nucleotide sequence