Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05865 and BWI76_RS05870 overlap by 4 nucleotides BWI76_RS05870 and BWI76_RS05875 are separated by 23 nucleotides BWI76_RS05875 and BWI76_RS05880 are separated by 7 nucleotides BWI76_RS05880 and BWI76_RS05885 are separated by 100 nucleotides
BWI76_RS05865: BWI76_RS05865 - ABC transporter permease, at 1,232,062 to 1,233,630
_RS05865
BWI76_RS05870: BWI76_RS05870 - ABC transporter, at 1,233,627 to 1,234,370
_RS05870
BWI76_RS05875: BWI76_RS05875 - hypothetical protein, at 1,234,394 to 1,236,181
_RS05875
BWI76_RS05880: BWI76_RS05880 - AraC-type DNA-binding domain-containing protein, at 1,236,189 to 1,236,986
_RS05880
BWI76_RS05885: BWI76_RS05885 - anion permease, at 1,237,087 to 1,237,896
_RS05885
Position (kb) 1234
1235
1236
1237 Strain fitness (log2 ratio) -1
0
1 at 1233.417 kb on + strand, within BWI76_RS05865 at 1233.562 kb on + strand at 1233.574 kb on + strand at 1233.575 kb on - strand at 1233.624 kb on + strand at 1233.624 kb on + strand at 1233.642 kb on - strand at 1233.680 kb on + strand at 1233.707 kb on + strand, within BWI76_RS05870 at 1233.760 kb on + strand, within BWI76_RS05870 at 1234.282 kb on + strand, within BWI76_RS05870 at 1234.295 kb on - strand, within BWI76_RS05870 at 1234.458 kb on + strand at 1234.493 kb on + strand at 1234.530 kb on + strand at 1234.586 kb on - strand, within BWI76_RS05875 at 1234.795 kb on + strand, within BWI76_RS05875 at 1234.976 kb on + strand, within BWI76_RS05875 at 1234.981 kb on - strand, within BWI76_RS05875 at 1235.194 kb on - strand, within BWI76_RS05875 at 1235.320 kb on + strand, within BWI76_RS05875 at 1235.598 kb on + strand, within BWI76_RS05875 at 1235.814 kb on - strand, within BWI76_RS05875 at 1236.204 kb on - strand at 1236.252 kb on + strand at 1236.300 kb on + strand, within BWI76_RS05880 at 1236.430 kb on - strand, within BWI76_RS05880 at 1236.989 kb on + strand at 1236.989 kb on + strand at 1236.989 kb on + strand at 1237.174 kb on - strand, within BWI76_RS05885
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,233,417 + BWI76_RS05865 0.86 +0.1 1,233,562 + -0.8 1,233,574 + -0.4 1,233,575 - -0.0 1,233,624 + -0.3 1,233,624 + -0.3 1,233,642 - +1.4 1,233,680 + +0.5 1,233,707 + BWI76_RS05870 0.11 -0.2 1,233,760 + BWI76_RS05870 0.18 +0.2 1,234,282 + BWI76_RS05870 0.88 -0.6 1,234,295 - BWI76_RS05870 0.90 +0.3 1,234,458 + -0.1 1,234,493 + -0.3 1,234,530 + -0.1 1,234,586 - BWI76_RS05875 0.11 +0.9 1,234,795 + BWI76_RS05875 0.22 -0.1 1,234,976 + BWI76_RS05875 0.33 +0.7 1,234,981 - BWI76_RS05875 0.33 +0.5 1,235,194 - BWI76_RS05875 0.45 -0.1 1,235,320 + BWI76_RS05875 0.52 +1.4 1,235,598 + BWI76_RS05875 0.67 +0.3 1,235,814 - BWI76_RS05875 0.79 -0.3 1,236,204 - -0.4 1,236,252 + +0.2 1,236,300 + BWI76_RS05880 0.14 -1.0 1,236,430 - BWI76_RS05880 0.30 -0.8 1,236,989 + -0.7 1,236,989 + -0.5 1,236,989 + -0.1 1,237,174 - BWI76_RS05885 0.11 -1.3
Or see this region's nucleotide sequence