Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02520 and BWI76_RS02525 are separated by 10 nucleotides BWI76_RS02525 and BWI76_RS02530 overlap by 8 nucleotides
BWI76_RS02520: BWI76_RS02520 - N-acetylmuramoyl-L-alanine amidase, at 515,678 to 517,015
_RS02520
BWI76_RS02525: BWI76_RS02525 - DNA mismatch repair protein MutL, at 517,026 to 518,921
_RS02525
BWI76_RS02530: BWI76_RS02530 - tRNA dimethylallyltransferase, at 518,914 to 519,864
_RS02530
Position (kb) 517
518
519 Strain fitness (log2 ratio) -2
-1
0
1 at 516.171 kb on - strand, within BWI76_RS02520 at 516.196 kb on + strand, within BWI76_RS02520 at 516.204 kb on - strand, within BWI76_RS02520 at 516.367 kb on + strand, within BWI76_RS02520 at 516.573 kb on + strand, within BWI76_RS02520 at 516.610 kb on - strand, within BWI76_RS02520 at 516.702 kb on + strand, within BWI76_RS02520 at 516.739 kb on + strand, within BWI76_RS02520 at 516.810 kb on + strand, within BWI76_RS02520 at 517.279 kb on + strand, within BWI76_RS02525 at 517.279 kb on + strand, within BWI76_RS02525 at 517.287 kb on - strand, within BWI76_RS02525 at 517.317 kb on + strand, within BWI76_RS02525 at 517.317 kb on + strand, within BWI76_RS02525 at 517.325 kb on - strand, within BWI76_RS02525 at 517.358 kb on - strand, within BWI76_RS02525 at 517.464 kb on - strand, within BWI76_RS02525 at 517.790 kb on + strand, within BWI76_RS02525 at 517.893 kb on - strand, within BWI76_RS02525 at 517.926 kb on - strand, within BWI76_RS02525 at 518.074 kb on - strand, within BWI76_RS02525 at 518.152 kb on + strand, within BWI76_RS02525 at 518.287 kb on + strand, within BWI76_RS02525 at 518.325 kb on + strand, within BWI76_RS02525 at 518.468 kb on - strand, within BWI76_RS02525 at 518.502 kb on + strand, within BWI76_RS02525 at 518.512 kb on + strand, within BWI76_RS02525 at 518.621 kb on - strand, within BWI76_RS02525 at 518.651 kb on + strand, within BWI76_RS02525 at 518.652 kb on - strand, within BWI76_RS02525 at 518.659 kb on - strand, within BWI76_RS02525 at 518.758 kb on + strand at 518.816 kb on + strand at 518.846 kb on + strand at 518.854 kb on - strand at 518.854 kb on - strand at 518.940 kb on + strand at 519.180 kb on + strand, within BWI76_RS02530 at 519.287 kb on - strand, within BWI76_RS02530 at 519.287 kb on - strand, within BWI76_RS02530 at 519.305 kb on - strand, within BWI76_RS02530 at 519.530 kb on + strand, within BWI76_RS02530 at 519.776 kb on + strand at 519.853 kb on + strand at 519.882 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 516,171 - BWI76_RS02520 0.37 +0.5 516,196 + BWI76_RS02520 0.39 -0.2 516,204 - BWI76_RS02520 0.39 +0.7 516,367 + BWI76_RS02520 0.51 -0.1 516,573 + BWI76_RS02520 0.67 -0.1 516,610 - BWI76_RS02520 0.70 +0.1 516,702 + BWI76_RS02520 0.77 -0.2 516,739 + BWI76_RS02520 0.79 -1.1 516,810 + BWI76_RS02520 0.85 +0.6 517,279 + BWI76_RS02525 0.13 +0.1 517,279 + BWI76_RS02525 0.13 -0.2 517,287 - BWI76_RS02525 0.14 -0.6 517,317 + BWI76_RS02525 0.15 +0.3 517,317 + BWI76_RS02525 0.15 +0.6 517,325 - BWI76_RS02525 0.16 +0.4 517,358 - BWI76_RS02525 0.18 +0.9 517,464 - BWI76_RS02525 0.23 -0.1 517,790 + BWI76_RS02525 0.40 +0.2 517,893 - BWI76_RS02525 0.46 +1.7 517,926 - BWI76_RS02525 0.47 +0.0 518,074 - BWI76_RS02525 0.55 +0.5 518,152 + BWI76_RS02525 0.59 +0.4 518,287 + BWI76_RS02525 0.67 +0.8 518,325 + BWI76_RS02525 0.69 -0.0 518,468 - BWI76_RS02525 0.76 +0.6 518,502 + BWI76_RS02525 0.78 +0.9 518,512 + BWI76_RS02525 0.78 +0.5 518,621 - BWI76_RS02525 0.84 +0.4 518,651 + BWI76_RS02525 0.86 +1.1 518,652 - BWI76_RS02525 0.86 +0.9 518,659 - BWI76_RS02525 0.86 -0.3 518,758 + -0.3 518,816 + +1.0 518,846 + +0.5 518,854 - +0.3 518,854 - -1.1 518,940 + -0.7 519,180 + BWI76_RS02530 0.28 +0.3 519,287 - BWI76_RS02530 0.39 -1.5 519,287 - BWI76_RS02530 0.39 -1.0 519,305 - BWI76_RS02530 0.41 -2.1 519,530 + BWI76_RS02530 0.65 -2.6 519,776 + -1.5 519,853 + +0.3 519,882 + +0.3
Or see this region's nucleotide sequence