Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00920 and BWI76_RS00925 are separated by 54 nucleotides BWI76_RS00925 and BWI76_RS00930 are separated by 55 nucleotides BWI76_RS00930 and BWI76_RS00935 are separated by 54 nucleotides BWI76_RS00935 and BWI76_RS00940 are separated by 82 nucleotides BWI76_RS00940 and BWI76_RS00945 are separated by 118 nucleotides BWI76_RS00945 and BWI76_RS00950 are separated by 23 nucleotides
BWI76_RS00920: BWI76_RS00920 - 23S ribosomal RNA, at 188,536 to 191,462
_RS00920
BWI76_RS00925: BWI76_RS00925 - 5S ribosomal RNA, at 191,517 to 191,632
_RS00925
BWI76_RS00930: BWI76_RS00930 - tRNA-Asp, at 191,688 to 191,764
_RS00930
BWI76_RS00935: BWI76_RS00935 - tRNA-Trp, at 191,819 to 191,894
_RS00935
BWI76_RS00940: BWI76_RS00940 - transcriptional regulator HdfR, at 191,977 to 192,798
_RS00940
BWI76_RS00945: BWI76_RS00945 - hypothetical protein, at 192,917 to 193,255
_RS00945
BWI76_RS00950: BWI76_RS00950 - ATP-dependent protease, at 193,279 to 194,799
_RS00950
Position (kb) 191
192
193 Strain fitness (log2 ratio) -2
-1
0
1 at 192.066 kb on + strand, within BWI76_RS00940 at 192.123 kb on - strand, within BWI76_RS00940 at 192.126 kb on + strand, within BWI76_RS00940 at 192.126 kb on + strand, within BWI76_RS00940 at 192.131 kb on + strand, within BWI76_RS00940 at 192.136 kb on + strand, within BWI76_RS00940 at 192.138 kb on + strand, within BWI76_RS00940 at 192.263 kb on - strand, within BWI76_RS00940 at 192.413 kb on + strand, within BWI76_RS00940 at 192.461 kb on + strand, within BWI76_RS00940 at 192.461 kb on + strand, within BWI76_RS00940 at 192.620 kb on + strand, within BWI76_RS00940 at 192.773 kb on - strand at 192.853 kb on + strand at 192.863 kb on - strand at 192.866 kb on + strand at 192.928 kb on - strand at 193.018 kb on + strand, within BWI76_RS00945 at 193.602 kb on - strand, within BWI76_RS00950 at 193.745 kb on - strand, within BWI76_RS00950
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 192,066 + BWI76_RS00940 0.11 -1.1 192,123 - BWI76_RS00940 0.18 -0.9 192,126 + BWI76_RS00940 0.18 -1.1 192,126 + BWI76_RS00940 0.18 -0.5 192,131 + BWI76_RS00940 0.19 -1.0 192,136 + BWI76_RS00940 0.19 -1.7 192,138 + BWI76_RS00940 0.20 -0.1 192,263 - BWI76_RS00940 0.35 +0.2 192,413 + BWI76_RS00940 0.53 -1.1 192,461 + BWI76_RS00940 0.59 -0.3 192,461 + BWI76_RS00940 0.59 -2.3 192,620 + BWI76_RS00940 0.78 -1.7 192,773 - -0.8 192,853 + -1.1 192,863 - -0.5 192,866 + -0.6 192,928 - +0.1 193,018 + BWI76_RS00945 0.30 -1.7 193,602 - BWI76_RS00950 0.21 -1.6 193,745 - BWI76_RS00950 0.31 -0.1
Or see this region's nucleotide sequence