Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25280 and AO353_25285 are separated by 151 nucleotides AO353_25285 and AO353_25290 overlap by 4 nucleotides AO353_25290 and AO353_25295 are separated by 3 nucleotides
AO353_25280: AO353_25280 - gamma-glutamyltransferase, at 5,576,496 to 5,578,106
_25280
AO353_25285: AO353_25285 - transglutaminase, at 5,578,258 to 5,579,055
_25285
AO353_25290: AO353_25290 - hypothetical protein, at 5,579,052 to 5,580,002
_25290
AO353_25295: AO353_25295 - hypothetical protein, at 5,580,006 to 5,581,415
_25295
Position (kb)
5579
5580
5581 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5578.076 kb on - strand at 5578.081 kb on + strand at 5578.082 kb on - strand at 5578.123 kb on + strand at 5578.228 kb on - strand at 5578.228 kb on - strand at 5578.259 kb on + strand at 5578.260 kb on - strand at 5578.260 kb on - strand at 5578.362 kb on - strand, within AO353_25285 at 5578.430 kb on + strand, within AO353_25285 at 5578.514 kb on + strand, within AO353_25285 at 5578.514 kb on + strand, within AO353_25285 at 5578.564 kb on - strand, within AO353_25285 at 5578.564 kb on - strand, within AO353_25285 at 5578.626 kb on + strand, within AO353_25285 at 5578.641 kb on - strand, within AO353_25285 at 5578.641 kb on - strand, within AO353_25285 at 5578.832 kb on + strand, within AO353_25285 at 5578.832 kb on + strand, within AO353_25285 at 5578.833 kb on - strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.876 kb on + strand, within AO353_25285 at 5578.877 kb on - strand, within AO353_25285 at 5578.916 kb on - strand, within AO353_25285 at 5578.916 kb on - strand, within AO353_25285 at 5579.019 kb on - strand at 5579.024 kb on + strand at 5579.024 kb on + strand at 5579.024 kb on + strand at 5579.024 kb on + strand at 5579.025 kb on - strand at 5579.025 kb on - strand at 5579.056 kb on - strand at 5579.068 kb on + strand at 5579.398 kb on + strand, within AO353_25290 at 5579.401 kb on + strand, within AO353_25290 at 5579.446 kb on + strand, within AO353_25290 at 5579.525 kb on - strand, within AO353_25290 at 5579.615 kb on - strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.743 kb on + strand, within AO353_25290 at 5579.744 kb on - strand, within AO353_25290 at 5579.744 kb on - strand, within AO353_25290 at 5579.744 kb on - strand, within AO353_25290 at 5579.744 kb on - strand, within AO353_25290 at 5579.744 kb on - strand, within AO353_25290 at 5579.744 kb on - strand, within AO353_25290 at 5579.747 kb on + strand, within AO353_25290 at 5579.747 kb on + strand, within AO353_25290 at 5579.748 kb on - strand, within AO353_25290 at 5579.748 kb on - strand, within AO353_25290 at 5579.824 kb on + strand, within AO353_25290 at 5579.825 kb on - strand, within AO353_25290 at 5579.825 kb on - strand, within AO353_25290 at 5579.915 kb on - strand at 5579.975 kb on - strand at 5580.007 kb on + strand at 5580.008 kb on - strand at 5580.223 kb on + strand, within AO353_25295 at 5580.223 kb on + strand, within AO353_25295 at 5580.223 kb on + strand at 5580.223 kb on + strand, within AO353_25295 at 5580.223 kb on + strand, within AO353_25295 at 5580.223 kb on + strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.224 kb on - strand, within AO353_25295 at 5580.399 kb on + strand, within AO353_25295 at 5580.430 kb on + strand, within AO353_25295 at 5580.431 kb on - strand, within AO353_25295 at 5580.431 kb on - strand, within AO353_25295 at 5580.454 kb on + strand, within AO353_25295 at 5580.461 kb on - strand at 5580.492 kb on + strand, within AO353_25295 at 5580.493 kb on - strand at 5580.652 kb on + strand, within AO353_25295 at 5580.652 kb on + strand, within AO353_25295 at 5580.652 kb on + strand, within AO353_25295 at 5580.653 kb on - strand, within AO353_25295 at 5580.653 kb on - strand, within AO353_25295 at 5580.653 kb on - strand, within AO353_25295 at 5580.653 kb on - strand, within AO353_25295 at 5580.653 kb on - strand, within AO353_25295 at 5580.653 kb on - strand at 5580.653 kb on - strand, within AO353_25295 at 5580.736 kb on + strand, within AO353_25295 at 5580.736 kb on + strand, within AO353_25295 at 5580.765 kb on + strand, within AO353_25295 at 5580.765 kb on + strand, within AO353_25295 at 5580.911 kb on - strand, within AO353_25295 at 5580.911 kb on - strand, within AO353_25295 at 5580.911 kb on - strand, within AO353_25295 at 5580.911 kb on - strand, within AO353_25295 at 5580.911 kb on - strand, within AO353_25295 at 5580.911 kb on - strand, within AO353_25295 at 5580.949 kb on - strand, within AO353_25295 at 5580.952 kb on + strand, within AO353_25295 at 5580.953 kb on - strand, within AO353_25295 at 5580.953 kb on - strand, within AO353_25295 at 5580.953 kb on - strand, within AO353_25295 at 5580.953 kb on - strand, within AO353_25295 at 5580.953 kb on - strand, within AO353_25295 at 5580.955 kb on + strand, within AO353_25295 at 5580.955 kb on + strand, within AO353_25295 at 5580.955 kb on + strand, within AO353_25295 at 5580.955 kb on + strand, within AO353_25295 at 5580.956 kb on - strand at 5580.956 kb on - strand, within AO353_25295
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 5,578,076 - -0.2 5,578,081 + +0.1 5,578,082 - +1.5 5,578,123 + +1.1 5,578,228 - -0.2 5,578,228 - +0.6 5,578,259 + -0.1 5,578,260 - +0.0 5,578,260 - +0.0 5,578,362 - AO353_25285 0.13 -0.3 5,578,430 + AO353_25285 0.22 -0.2 5,578,514 + AO353_25285 0.32 -0.2 5,578,514 + AO353_25285 0.32 +0.6 5,578,564 - AO353_25285 0.38 +0.9 5,578,564 - AO353_25285 0.38 +0.3 5,578,626 + AO353_25285 0.46 +1.1 5,578,641 - AO353_25285 0.48 +0.7 5,578,641 - AO353_25285 0.48 -1.3 5,578,832 + AO353_25285 0.72 +0.6 5,578,832 + AO353_25285 0.72 +0.5 5,578,833 - AO353_25285 0.72 +0.3 5,578,876 + AO353_25285 0.77 +0.2 5,578,876 + AO353_25285 0.77 -1.1 5,578,876 + AO353_25285 0.77 +0.3 5,578,876 + AO353_25285 0.77 -0.7 5,578,876 + AO353_25285 0.77 -0.0 5,578,876 + AO353_25285 0.77 -0.2 5,578,876 + AO353_25285 0.77 +1.1 5,578,876 + AO353_25285 0.77 -0.6 5,578,877 - AO353_25285 0.78 +1.3 5,578,916 - AO353_25285 0.82 -0.0 5,578,916 - AO353_25285 0.82 +0.6 5,579,019 - -1.7 5,579,024 + -0.6 5,579,024 + +0.3 5,579,024 + -0.8 5,579,024 + -1.0 5,579,025 - -0.3 5,579,025 - -0.8 5,579,056 - +0.4 5,579,068 + -0.2 5,579,398 + AO353_25290 0.36 -0.0 5,579,401 + AO353_25290 0.37 +0.1 5,579,446 + AO353_25290 0.41 +1.5 5,579,525 - AO353_25290 0.50 -0.5 5,579,615 - AO353_25290 0.59 +1.1 5,579,743 + AO353_25290 0.73 +0.1 5,579,743 + AO353_25290 0.73 -1.8 5,579,743 + AO353_25290 0.73 -0.1 5,579,743 + AO353_25290 0.73 +0.6 5,579,743 + AO353_25290 0.73 -0.4 5,579,743 + AO353_25290 0.73 -0.3 5,579,743 + AO353_25290 0.73 -2.0 5,579,743 + AO353_25290 0.73 -0.0 5,579,744 - AO353_25290 0.73 +0.7 5,579,744 - AO353_25290 0.73 -0.3 5,579,744 - AO353_25290 0.73 +1.1 5,579,744 - AO353_25290 0.73 +1.5 5,579,744 - AO353_25290 0.73 -0.8 5,579,744 - AO353_25290 0.73 -0.2 5,579,747 + AO353_25290 0.73 +0.5 5,579,747 + AO353_25290 0.73 -0.2 5,579,748 - AO353_25290 0.73 +0.5 5,579,748 - AO353_25290 0.73 +0.3 5,579,824 + AO353_25290 0.81 +0.1 5,579,825 - AO353_25290 0.81 +0.2 5,579,825 - AO353_25290 0.81 -0.3 5,579,915 - -1.7 5,579,975 - +0.4 5,580,007 + -0.4 5,580,008 - -0.3 5,580,223 + AO353_25295 0.15 +0.4 5,580,223 + AO353_25295 0.15 +0.8 5,580,223 + +0.5 5,580,223 + AO353_25295 0.15 +0.7 5,580,223 + AO353_25295 0.15 +0.2 5,580,223 + AO353_25295 0.15 +0.1 5,580,224 - AO353_25295 0.15 +1.5 5,580,224 - AO353_25295 0.15 +0.7 5,580,224 - AO353_25295 0.15 -0.4 5,580,224 - AO353_25295 0.15 -0.6 5,580,224 - AO353_25295 0.15 +1.2 5,580,224 - AO353_25295 0.15 +2.0 5,580,224 - AO353_25295 0.15 +0.1 5,580,224 - AO353_25295 0.15 +0.9 5,580,399 + AO353_25295 0.28 -1.3 5,580,430 + AO353_25295 0.30 +0.1 5,580,431 - AO353_25295 0.30 -1.1 5,580,431 - AO353_25295 0.30 -1.0 5,580,454 + AO353_25295 0.32 -1.7 5,580,461 - -0.8 5,580,492 + AO353_25295 0.34 -0.3 5,580,493 - +2.1 5,580,652 + AO353_25295 0.46 +0.5 5,580,652 + AO353_25295 0.46 +0.2 5,580,652 + AO353_25295 0.46 -0.6 5,580,653 - AO353_25295 0.46 +3.1 5,580,653 - AO353_25295 0.46 -0.8 5,580,653 - AO353_25295 0.46 -0.7 5,580,653 - AO353_25295 0.46 -1.8 5,580,653 - AO353_25295 0.46 -0.5 5,580,653 - -1.3 5,580,653 - AO353_25295 0.46 -0.7 5,580,736 + AO353_25295 0.52 +0.5 5,580,736 + AO353_25295 0.52 -2.3 5,580,765 + AO353_25295 0.54 -1.0 5,580,765 + AO353_25295 0.54 +0.6 5,580,911 - AO353_25295 0.64 +0.8 5,580,911 - AO353_25295 0.64 -0.1 5,580,911 - AO353_25295 0.64 +1.7 5,580,911 - AO353_25295 0.64 +0.2 5,580,911 - AO353_25295 0.64 +0.0 5,580,911 - AO353_25295 0.64 -1.5 5,580,949 - AO353_25295 0.67 -0.3 5,580,952 + AO353_25295 0.67 +0.0 5,580,953 - AO353_25295 0.67 -0.5 5,580,953 - AO353_25295 0.67 -2.5 5,580,953 - AO353_25295 0.67 +1.3 5,580,953 - AO353_25295 0.67 +2.0 5,580,953 - AO353_25295 0.67 +0.3 5,580,955 + AO353_25295 0.67 -0.8 5,580,955 + AO353_25295 0.67 +1.4 5,580,955 + AO353_25295 0.67 +0.9 5,580,955 + AO353_25295 0.67 -0.7 5,580,956 - +1.5 5,580,956 - AO353_25295 0.67 +0.9
Or see this region's nucleotide sequence