Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18565

Experiment: Adenosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_18555 and AO353_18560 are separated by 144 nucleotidesAO353_18560 and AO353_18565 overlap by 4 nucleotidesAO353_18565 and AO353_18570 are separated by 115 nucleotidesAO353_18570 and AO353_18575 are separated by 514 nucleotides AO353_18555: AO353_18555 - aromatic amino acid transporter, at 4,082,892 to 4,084,313 _18555 AO353_18560: AO353_18560 - class I peptide chain release factor, at 4,084,458 to 4,084,871 _18560 AO353_18565: AO353_18565 - MFS transporter, at 4,084,868 to 4,086,067 _18565 AO353_18570: AO353_18570 - hypothetical protein, at 4,086,183 to 4,086,365 _18570 AO353_18575: AO353_18575 - tyrosine aminotransferase (EC 2.6.1.57) (from data), at 4,086,880 to 4,088,073 _18575 Position (kb) 4084 4085 4086 4087Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4083.972 kb on + strand, within AO353_18555at 4083.972 kb on + strand, within AO353_18555at 4083.972 kb on + strand, within AO353_18555at 4083.972 kb on + strand, within AO353_18555at 4083.972 kb on + strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4083.973 kb on - strand, within AO353_18555at 4084.053 kb on + strand, within AO353_18555at 4084.053 kb on + strand, within AO353_18555at 4084.053 kb on + strand, within AO353_18555at 4084.054 kb on - strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.137 kb on + strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.138 kb on - strand, within AO353_18555at 4084.163 kb on + strandat 4084.163 kb on + strand, within AO353_18555at 4084.248 kb on + strandat 4084.248 kb on + strandat 4084.248 kb on + strandat 4084.249 kb on - strandat 4084.249 kb on - strandat 4084.249 kb on - strandat 4084.311 kb on + strandat 4084.311 kb on + strandat 4084.312 kb on - strandat 4084.373 kb on + strandat 4084.373 kb on + strandat 4084.374 kb on - strandat 4084.374 kb on - strandat 4084.374 kb on - strandat 4084.374 kb on - strandat 4084.400 kb on - strandat 4084.438 kb on + strandat 4084.611 kb on + strand, within AO353_18560at 4084.611 kb on + strand, within AO353_18560at 4084.611 kb on + strand, within AO353_18560at 4084.611 kb on + strand, within AO353_18560at 4084.870 kb on - strandat 4084.870 kb on - strandat 4084.870 kb on - strandat 4084.870 kb on - strandat 4084.893 kb on + strandat 4084.894 kb on - strandat 4084.917 kb on + strandat 4084.917 kb on + strandat 4084.917 kb on + strandat 4084.917 kb on + strandat 4084.918 kb on - strandat 4084.918 kb on - strandat 4084.918 kb on - strandat 4085.349 kb on + strand, within AO353_18565at 4085.349 kb on + strand, within AO353_18565at 4085.349 kb on + strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.350 kb on - strand, within AO353_18565at 4085.352 kb on + strand, within AO353_18565at 4085.352 kb on + strand, within AO353_18565at 4085.352 kb on + strand, within AO353_18565at 4085.352 kb on + strand, within AO353_18565at 4085.352 kb on + strand, within AO353_18565at 4085.352 kb on + strand, within AO353_18565at 4085.353 kb on - strand, within AO353_18565at 4085.353 kb on - strand, within AO353_18565at 4085.604 kb on + strand, within AO353_18565at 4085.785 kb on + strand, within AO353_18565at 4085.785 kb on + strand, within AO353_18565at 4085.786 kb on - strand, within AO353_18565at 4085.868 kb on + strand, within AO353_18565at 4085.895 kb on + strand, within AO353_18565at 4085.895 kb on + strand, within AO353_18565at 4085.895 kb on + strand, within AO353_18565at 4085.895 kb on + strand, within AO353_18565at 4085.896 kb on - strand, within AO353_18565at 4085.896 kb on - strand, within AO353_18565at 4085.896 kb on - strand, within AO353_18565at 4085.896 kb on - strand, within AO353_18565at 4085.955 kb on + strandat 4085.955 kb on + strandat 4085.955 kb on + strandat 4085.955 kb on + strandat 4085.956 kb on - strandat 4085.956 kb on - strandat 4085.956 kb on - strandat 4086.007 kb on + strandat 4086.007 kb on + strandat 4086.007 kb on + strandat 4086.007 kb on + strandat 4086.008 kb on - strandat 4086.008 kb on - strandat 4086.094 kb on + strandat 4086.094 kb on + strandat 4086.094 kb on + strandat 4086.095 kb on - strandat 4086.098 kb on + strandat 4086.098 kb on + strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.099 kb on - strandat 4086.107 kb on + strandat 4086.107 kb on + strandat 4086.107 kb on + strandat 4086.107 kb on + strandat 4086.108 kb on - strandat 4086.108 kb on - strandat 4086.108 kb on - strandat 4086.113 kb on - strandat 4086.330 kb on + strand, within AO353_18570at 4086.407 kb on + strandat 4086.494 kb on + strandat 4086.557 kb on + strandat 4086.557 kb on + strandat 4086.602 kb on - strandat 4086.613 kb on + strandat 4086.614 kb on - strandat 4086.614 kb on - strandat 4086.614 kb on - strandat 4086.614 kb on - strandat 4086.614 kb on - strandat 4086.614 kb on - strandat 4086.627 kb on + strandat 4086.628 kb on - strandat 4086.645 kb on + strandat 4086.646 kb on - strandat 4086.674 kb on + strandat 4086.674 kb on + strandat 4086.674 kb on + strandat 4086.674 kb on + strandat 4086.674 kb on + strandat 4086.674 kb on + strandat 4086.675 kb on - strandat 4086.675 kb on - strandat 4086.777 kb on + strandat 4086.777 kb on + strandat 4086.777 kb on + strandat 4086.778 kb on - strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.782 kb on + strandat 4086.783 kb on - strandat 4086.783 kb on - strandat 4086.783 kb on - strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.786 kb on + strandat 4086.787 kb on - strandat 4086.787 kb on - strandat 4086.787 kb on - strandat 4086.787 kb on - strandat 4086.881 kb on + strandat 4086.881 kb on + strandat 4086.881 kb on + strandat 4086.881 kb on + strandat 4086.881 kb on + strandat 4086.881 kb on + strandat 4086.881 kb on + strandat 4086.882 kb on - strandat 4086.882 kb on - strandat 4086.882 kb on - strandat 4086.882 kb on - strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.971 kb on + strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4086.972 kb on - strandat 4087.026 kb on - strand, within AO353_18575

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (N)
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4,083,972 + AO353_18555 0.76 -0.7
4,083,972 + AO353_18555 0.76 -0.0
4,083,972 + AO353_18555 0.76 +0.7
4,083,972 + AO353_18555 0.76 -0.2
4,083,972 + AO353_18555 0.76 +2.1
4,083,973 - AO353_18555 0.76 -2.9
4,083,973 - AO353_18555 0.76 -0.4
4,083,973 - AO353_18555 0.76 -1.2
4,083,973 - AO353_18555 0.76 +0.3
4,083,973 - AO353_18555 0.76 +0.3
4,083,973 - AO353_18555 0.76 +0.3
4,083,973 - AO353_18555 0.76 -0.7
4,083,973 - AO353_18555 0.76 -0.3
4,083,973 - AO353_18555 0.76 -0.2
4,083,973 - AO353_18555 0.76 -0.7
4,083,973 - AO353_18555 0.76 -0.6
4,084,053 + AO353_18555 0.82 +0.2
4,084,053 + AO353_18555 0.82 -1.6
4,084,053 + AO353_18555 0.82 +1.0
4,084,054 - AO353_18555 0.82 +0.7
4,084,137 + AO353_18555 0.88 +0.5
4,084,137 + AO353_18555 0.88 +0.1
4,084,137 + AO353_18555 0.88 -0.1
4,084,137 + AO353_18555 0.88 -1.0
4,084,137 + AO353_18555 0.88 +0.0
4,084,137 + AO353_18555 0.88 +0.4
4,084,137 + AO353_18555 0.88 -0.5
4,084,137 + AO353_18555 0.88 -0.8
4,084,137 + AO353_18555 0.88 +0.1
4,084,138 - AO353_18555 0.88 +0.7
4,084,138 - AO353_18555 0.88 +0.1
4,084,138 - AO353_18555 0.88 -0.7
4,084,138 - AO353_18555 0.88 -0.2
4,084,138 - AO353_18555 0.88 -1.3
4,084,138 - AO353_18555 0.88 -0.7
4,084,138 - AO353_18555 0.88 -0.5
4,084,138 - AO353_18555 0.88 +1.6
4,084,138 - AO353_18555 0.88 +0.7
4,084,163 + +2.4
4,084,163 + AO353_18555 0.89 -0.4
4,084,248 + -0.1
4,084,248 + -1.0
4,084,248 + -1.2
4,084,249 - -0.5
4,084,249 - +0.6
4,084,249 - -0.2
4,084,311 + -0.5
4,084,311 + -0.3
4,084,312 - +1.4
4,084,373 + -0.8
4,084,373 + -1.4
4,084,374 - +0.4
4,084,374 - +1.1
4,084,374 - -0.4
4,084,374 - +1.3
4,084,400 - +0.1
4,084,438 + -0.8
4,084,611 + AO353_18560 0.37 -1.6
4,084,611 + AO353_18560 0.37 -0.0
4,084,611 + AO353_18560 0.37 -0.8
4,084,611 + AO353_18560 0.37 -0.6
4,084,870 - -0.8
4,084,870 - -0.8
4,084,870 - +0.7
4,084,870 - -0.6
4,084,893 + -0.1
4,084,894 - -0.5
4,084,917 + -0.6
4,084,917 + -0.3
4,084,917 + +0.7
4,084,917 + +1.1
4,084,918 - +0.2
4,084,918 - -0.3
4,084,918 - +1.4
4,085,349 + AO353_18565 0.40 +0.5
4,085,349 + AO353_18565 0.40 +2.1
4,085,349 + AO353_18565 0.40 +0.1
4,085,350 - AO353_18565 0.40 -2.7
4,085,350 - AO353_18565 0.40 -0.5
4,085,350 - AO353_18565 0.40 -0.8
4,085,350 - AO353_18565 0.40 +0.5
4,085,350 - AO353_18565 0.40 +0.4
4,085,350 - AO353_18565 0.40 +1.8
4,085,350 - AO353_18565 0.40 -1.1
4,085,350 - AO353_18565 0.40 +0.6
4,085,352 + AO353_18565 0.40 -0.3
4,085,352 + AO353_18565 0.40 +1.1
4,085,352 + AO353_18565 0.40 +0.4
4,085,352 + AO353_18565 0.40 +0.2
4,085,352 + AO353_18565 0.40 -0.6
4,085,352 + AO353_18565 0.40 -0.5
4,085,353 - AO353_18565 0.40 -1.3
4,085,353 - AO353_18565 0.40 +0.8
4,085,604 + AO353_18565 0.61 +0.6
4,085,785 + AO353_18565 0.76 -0.6
4,085,785 + AO353_18565 0.76 -0.7
4,085,786 - AO353_18565 0.77 -0.4
4,085,868 + AO353_18565 0.83 -1.2
4,085,895 + AO353_18565 0.86 -0.7
4,085,895 + AO353_18565 0.86 +0.4
4,085,895 + AO353_18565 0.86 -0.4
4,085,895 + AO353_18565 0.86 -0.3
4,085,896 - AO353_18565 0.86 -0.3
4,085,896 - AO353_18565 0.86 -0.0
4,085,896 - AO353_18565 0.86 +1.1
4,085,896 - AO353_18565 0.86 +0.5
4,085,955 + -0.4
4,085,955 + -0.3
4,085,955 + +0.5
4,085,955 + +2.6
4,085,956 - -1.1
4,085,956 - -0.8
4,085,956 - +0.6
4,086,007 + +1.6
4,086,007 + -0.2
4,086,007 + +0.1
4,086,007 + -0.9
4,086,008 - +0.8
4,086,008 - +0.2
4,086,094 + +0.9
4,086,094 + +1.2
4,086,094 + +0.1
4,086,095 - -0.5
4,086,098 + -0.3
4,086,098 + +0.0
4,086,099 - +0.7
4,086,099 - -1.0
4,086,099 - +0.8
4,086,099 - -0.1
4,086,099 - -0.5
4,086,099 - -0.9
4,086,099 - -0.8
4,086,099 - -1.3
4,086,099 - -0.3
4,086,107 + +1.7
4,086,107 + +0.6
4,086,107 + -0.9
4,086,107 + +0.8
4,086,108 - -0.5
4,086,108 - +0.5
4,086,108 - -0.2
4,086,113 - +0.5
4,086,330 + AO353_18570 0.80 +0.5
4,086,407 + -0.6
4,086,494 + +0.5
4,086,557 + -0.1
4,086,557 + +1.6
4,086,602 - +0.7
4,086,613 + +0.8
4,086,614 - +1.1
4,086,614 - +1.1
4,086,614 - -1.3
4,086,614 - +0.6
4,086,614 - -1.9
4,086,614 - -1.5
4,086,627 + +0.4
4,086,628 - +0.1
4,086,645 + +0.0
4,086,646 - -0.2
4,086,674 + +0.0
4,086,674 + +0.6
4,086,674 + -1.5
4,086,674 + -0.3
4,086,674 + -1.1
4,086,674 + -2.0
4,086,675 - +0.2
4,086,675 - -0.5
4,086,777 + -0.9
4,086,777 + -0.6
4,086,777 + -0.5
4,086,778 - +0.8
4,086,782 + +0.9
4,086,782 + -1.0
4,086,782 + -2.0
4,086,782 + +0.5
4,086,782 + +0.2
4,086,782 + -0.5
4,086,782 + -0.4
4,086,782 + +0.8
4,086,782 + -1.1
4,086,782 + +1.0
4,086,782 + +0.1
4,086,783 - +1.4
4,086,783 - +0.7
4,086,783 - -1.8
4,086,786 + +0.1
4,086,786 + -0.3
4,086,786 + -0.2
4,086,786 + +0.2
4,086,786 + +0.4
4,086,786 + -0.4
4,086,786 + -2.3
4,086,786 + +0.4
4,086,786 + +0.1
4,086,786 + -0.9
4,086,787 - -0.2
4,086,787 - -0.3
4,086,787 - -1.2
4,086,787 - -0.1
4,086,881 + +0.1
4,086,881 + +0.4
4,086,881 + +0.5
4,086,881 + -0.2
4,086,881 + -1.9
4,086,881 + -1.9
4,086,881 + -0.8
4,086,882 - -1.2
4,086,882 - +0.6
4,086,882 - -0.9
4,086,882 - +0.9
4,086,971 + -0.3
4,086,971 + +0.5
4,086,971 + -0.6
4,086,971 + -0.2
4,086,971 + +0.7
4,086,971 + -0.5
4,086,971 + -0.5
4,086,971 + -0.2
4,086,971 + +0.8
4,086,971 + +0.1
4,086,971 + +0.8
4,086,971 + -0.3
4,086,972 - -0.1
4,086,972 - -0.0
4,086,972 - +0.4
4,086,972 - +0.6
4,086,972 - -0.3
4,086,972 - -0.5
4,086,972 - +0.3
4,086,972 - +0.6
4,086,972 - -0.1
4,086,972 - -1.9
4,087,026 - AO353_18575 0.12 -0.5

Or see this region's nucleotide sequence