Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07500 and AO353_07505 are separated by 107 nucleotides AO353_07505 and AO353_07510 overlap by 4 nucleotides AO353_07510 and AO353_07515 overlap by 8 nucleotides AO353_07515 and AO353_07520 overlap by 8 nucleotides
AO353_07500: AO353_07500 - pyrroloquinoline quinone biosynthesis protein PqqE, at 1,652,303 to 1,652,599
_07500
AO353_07505: AO353_07505 - dethiobiotin synthetase, at 1,652,707 to 1,653,387
_07505
AO353_07510: AO353_07510 - malonyl-[acyl-carrier protein] O-methyltransferase BioC, at 1,653,384 to 1,654,196
_07510
AO353_07515: AO353_07515 - transporter, at 1,654,189 to 1,654,920
_07515
AO353_07520: AO353_07520 - 8-amino-7-oxononanoate synthase, at 1,654,913 to 1,656,091
_07520
Position (kb)
1653
1654
1655 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1652.395 kb on + strand, within AO353_07500 at 1652.395 kb on + strand, within AO353_07500 at 1652.395 kb on + strand, within AO353_07500 at 1652.395 kb on + strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.555 kb on - strand, within AO353_07500 at 1652.555 kb on - strand, within AO353_07500 at 1652.555 kb on - strand, within AO353_07500 at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.697 kb on + strand at 1652.697 kb on + strand at 1652.698 kb on - strand at 1652.698 kb on - strand at 1652.701 kb on + strand at 1652.701 kb on + strand at 1652.701 kb on + strand at 1652.701 kb on + strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.856 kb on + strand, within AO353_07505 at 1652.856 kb on + strand, within AO353_07505 at 1652.857 kb on - strand, within AO353_07505 at 1652.857 kb on - strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.232 kb on - strand, within AO353_07505 at 1653.288 kb on + strand, within AO353_07505 at 1653.316 kb on + strand, within AO353_07505 at 1653.316 kb on + strand, within AO353_07505 at 1653.317 kb on - strand, within AO353_07505 at 1653.317 kb on - strand, within AO353_07505 at 1653.317 kb on - strand, within AO353_07505 at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.375 kb on - strand at 1653.375 kb on - strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.409 kb on + strand at 1653.409 kb on + strand at 1653.410 kb on - strand at 1653.421 kb on + strand at 1653.422 kb on - strand at 1653.422 kb on - strand at 1653.422 kb on - strand at 1653.460 kb on + strand at 1653.460 kb on + strand at 1653.527 kb on + strand, within AO353_07510 at 1653.527 kb on + strand, within AO353_07510 at 1653.528 kb on - strand, within AO353_07510 at 1653.528 kb on - strand, within AO353_07510 at 1653.564 kb on - strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.647 kb on - strand, within AO353_07510 at 1653.647 kb on - strand, within AO353_07510 at 1653.647 kb on - strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.725 kb on + strand, within AO353_07510 at 1653.726 kb on - strand, within AO353_07510 at 1653.819 kb on + strand, within AO353_07510 at 1653.820 kb on - strand, within AO353_07510 at 1654.000 kb on + strand, within AO353_07510 at 1654.001 kb on - strand, within AO353_07510 at 1654.001 kb on - strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.185 kb on + strand at 1654.185 kb on + strand at 1654.186 kb on - strand at 1654.186 kb on - strand at 1654.306 kb on + strand, within AO353_07515 at 1654.306 kb on + strand, within AO353_07515 at 1654.641 kb on + strand, within AO353_07515 at 1654.769 kb on - strand, within AO353_07515 at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 1,652,395 + AO353_07500 0.31 -0.7 1,652,395 + AO353_07500 0.31 -1.0 1,652,395 + AO353_07500 0.31 -0.8 1,652,395 + AO353_07500 0.31 +0.6 1,652,396 - AO353_07500 0.31 -0.7 1,652,396 - AO353_07500 0.31 -1.1 1,652,396 - AO353_07500 0.31 +0.1 1,652,396 - AO353_07500 0.31 -1.0 1,652,396 - AO353_07500 0.31 +0.2 1,652,404 + AO353_07500 0.34 +0.2 1,652,404 + AO353_07500 0.34 +1.8 1,652,404 + AO353_07500 0.34 -0.1 1,652,404 + AO353_07500 0.34 -0.1 1,652,404 + AO353_07500 0.34 -0.3 1,652,404 + AO353_07500 0.34 +0.2 1,652,404 + AO353_07500 0.34 +1.1 1,652,404 + AO353_07500 0.34 +1.0 1,652,404 + AO353_07500 0.34 -1.2 1,652,404 + AO353_07500 0.34 +1.3 1,652,405 - AO353_07500 0.34 -0.3 1,652,405 - AO353_07500 0.34 -0.3 1,652,405 - AO353_07500 0.34 -1.0 1,652,405 - AO353_07500 0.34 -0.7 1,652,405 - AO353_07500 0.34 +0.0 1,652,405 - AO353_07500 0.34 -0.3 1,652,405 - AO353_07500 0.34 -0.7 1,652,405 - AO353_07500 0.34 +0.9 1,652,405 - AO353_07500 0.34 +0.7 1,652,407 + AO353_07500 0.35 +0.7 1,652,407 + AO353_07500 0.35 +0.3 1,652,407 + AO353_07500 0.35 +0.0 1,652,407 + AO353_07500 0.35 +0.4 1,652,407 + AO353_07500 0.35 -1.5 1,652,554 + AO353_07500 0.85 +0.8 1,652,554 + AO353_07500 0.85 -0.8 1,652,554 + AO353_07500 0.85 -0.5 1,652,554 + AO353_07500 0.85 +0.6 1,652,555 - AO353_07500 0.85 -1.1 1,652,555 - AO353_07500 0.85 -0.7 1,652,555 - AO353_07500 0.85 -0.6 1,652,571 + +0.2 1,652,571 + -0.2 1,652,571 + -0.1 1,652,571 + +0.4 1,652,571 + -0.7 1,652,572 - -0.3 1,652,572 - -0.7 1,652,572 - +0.9 1,652,572 - -0.7 1,652,572 - -0.2 1,652,572 - -0.0 1,652,572 - +1.4 1,652,697 + -0.4 1,652,697 + -0.8 1,652,698 - -1.9 1,652,698 - -0.2 1,652,701 + -1.3 1,652,701 + +1.1 1,652,701 + +0.6 1,652,701 + +0.0 1,652,702 - +0.2 1,652,702 - +0.8 1,652,702 - +0.4 1,652,702 - +0.6 1,652,702 - -1.8 1,652,702 - +0.0 1,652,702 - -0.3 1,652,856 + AO353_07505 0.22 -1.3 1,652,856 + AO353_07505 0.22 -0.2 1,652,857 - AO353_07505 0.22 -2.2 1,652,857 - AO353_07505 0.22 -0.6 1,653,070 + AO353_07505 0.53 -2.2 1,653,070 + AO353_07505 0.53 -2.0 1,653,070 + AO353_07505 0.53 -0.1 1,653,070 + AO353_07505 0.53 -2.2 1,653,070 + AO353_07505 0.53 -0.5 1,653,070 + AO353_07505 0.53 -0.3 1,653,070 + AO353_07505 0.53 -1.2 1,653,070 + AO353_07505 0.53 -2.8 1,653,070 + +0.5 1,653,070 + AO353_07505 0.53 +0.0 1,653,070 + AO353_07505 0.53 -2.3 1,653,070 + AO353_07505 0.53 -1.6 1,653,070 + AO353_07505 0.53 -1.0 1,653,071 - AO353_07505 0.53 -2.1 1,653,071 - AO353_07505 0.53 -1.5 1,653,071 - AO353_07505 0.53 -2.6 1,653,071 - AO353_07505 0.53 -0.5 1,653,071 - AO353_07505 0.53 +0.1 1,653,071 - AO353_07505 0.53 -0.7 1,653,071 - AO353_07505 0.53 -1.4 1,653,071 - AO353_07505 0.53 -1.6 1,653,071 - AO353_07505 0.53 -1.4 1,653,071 - AO353_07505 0.53 -2.0 1,653,071 - AO353_07505 0.53 -1.4 1,653,071 - AO353_07505 0.53 -1.2 1,653,071 - AO353_07505 0.53 -1.1 1,653,071 - AO353_07505 0.53 -1.2 1,653,071 - AO353_07505 0.53 -2.0 1,653,182 + AO353_07505 0.70 -3.0 1,653,182 + AO353_07505 0.70 -3.0 1,653,182 + AO353_07505 0.70 -2.6 1,653,182 + AO353_07505 0.70 -1.9 1,653,182 + AO353_07505 0.70 -0.2 1,653,183 - AO353_07505 0.70 -2.0 1,653,183 - AO353_07505 0.70 -1.7 1,653,183 - AO353_07505 0.70 -2.6 1,653,183 - AO353_07505 0.70 +0.4 1,653,183 - AO353_07505 0.70 -1.6 1,653,183 - AO353_07505 0.70 -1.8 1,653,232 - AO353_07505 0.77 -1.8 1,653,288 + AO353_07505 0.85 -1.3 1,653,316 + AO353_07505 0.89 -1.7 1,653,316 + AO353_07505 0.89 -1.0 1,653,317 - AO353_07505 0.90 -1.4 1,653,317 - AO353_07505 0.90 -2.1 1,653,317 - AO353_07505 0.90 +0.2 1,653,374 + -0.2 1,653,374 + -1.5 1,653,374 + -1.4 1,653,374 + -0.8 1,653,374 + -1.4 1,653,374 + -1.0 1,653,374 + -1.5 1,653,375 - -0.3 1,653,375 - -0.3 1,653,387 + -0.5 1,653,387 + +0.5 1,653,387 + -1.0 1,653,387 + -2.3 1,653,387 + -0.9 1,653,387 + +0.7 1,653,409 + -0.4 1,653,409 + -1.5 1,653,410 - -3.2 1,653,421 + -3.0 1,653,422 - -0.3 1,653,422 - +1.2 1,653,422 - -1.2 1,653,460 + -1.0 1,653,460 + -0.2 1,653,527 + AO353_07510 0.18 -3.4 1,653,527 + AO353_07510 0.18 -2.7 1,653,528 - AO353_07510 0.18 -0.5 1,653,528 - AO353_07510 0.18 -3.3 1,653,564 - AO353_07510 0.22 -1.5 1,653,585 + AO353_07510 0.25 -1.8 1,653,585 + AO353_07510 0.25 -2.0 1,653,585 + AO353_07510 0.25 -1.4 1,653,585 + AO353_07510 0.25 -2.7 1,653,585 + AO353_07510 0.25 +0.5 1,653,586 - AO353_07510 0.25 -1.9 1,653,586 - AO353_07510 0.25 -1.3 1,653,586 - AO353_07510 0.25 -1.8 1,653,586 - AO353_07510 0.25 +0.6 1,653,586 - AO353_07510 0.25 -3.6 1,653,586 - AO353_07510 0.25 -2.8 1,653,646 + AO353_07510 0.32 -0.3 1,653,646 + AO353_07510 0.32 -0.3 1,653,646 + AO353_07510 0.32 -1.4 1,653,646 + AO353_07510 0.32 -1.8 1,653,646 + AO353_07510 0.32 -0.2 1,653,646 + AO353_07510 0.32 -1.6 1,653,646 + AO353_07510 0.32 -2.2 1,653,646 + AO353_07510 0.32 -2.9 1,653,646 + AO353_07510 0.32 -1.6 1,653,646 + AO353_07510 0.32 +0.6 1,653,646 + AO353_07510 0.32 -2.4 1,653,646 + AO353_07510 0.32 -2.8 1,653,646 + AO353_07510 0.32 -0.5 1,653,647 - AO353_07510 0.32 -0.9 1,653,647 - AO353_07510 0.32 -2.8 1,653,647 - AO353_07510 0.32 +0.7 1,653,718 + AO353_07510 0.41 +1.5 1,653,718 + AO353_07510 0.41 -1.1 1,653,718 + AO353_07510 0.41 -0.8 1,653,718 + AO353_07510 0.41 -2.3 1,653,719 - AO353_07510 0.41 -1.5 1,653,719 - AO353_07510 0.41 -1.8 1,653,719 - AO353_07510 0.41 -2.0 1,653,719 - AO353_07510 0.41 -1.0 1,653,725 + AO353_07510 0.42 -0.5 1,653,726 - AO353_07510 0.42 -3.4 1,653,819 + AO353_07510 0.54 -1.4 1,653,820 - AO353_07510 0.54 -2.1 1,654,000 + AO353_07510 0.76 -1.0 1,654,001 - AO353_07510 0.76 -2.1 1,654,001 - AO353_07510 0.76 -0.3 1,654,108 + AO353_07510 0.89 -3.8 1,654,108 + AO353_07510 0.89 -1.1 1,654,108 + AO353_07510 0.89 -1.0 1,654,108 + AO353_07510 0.89 -2.0 1,654,108 + AO353_07510 0.89 -2.2 1,654,108 + AO353_07510 0.89 -0.6 1,654,108 + AO353_07510 0.89 -0.4 1,654,108 + AO353_07510 0.89 -1.5 1,654,108 + AO353_07510 0.89 +0.1 1,654,109 - AO353_07510 0.89 -1.0 1,654,109 - AO353_07510 0.89 -1.8 1,654,109 - AO353_07510 0.89 +0.5 1,654,109 - AO353_07510 0.89 -1.7 1,654,185 + -0.9 1,654,185 + -0.8 1,654,186 - -1.2 1,654,186 - -1.1 1,654,306 + AO353_07515 0.16 +0.7 1,654,306 + AO353_07515 0.16 -1.9 1,654,641 + AO353_07515 0.62 +0.1 1,654,769 - AO353_07515 0.79 -0.7 1,654,967 + -0.7 1,654,967 + -4.2 1,654,967 + -2.3 1,654,967 + -1.3 1,654,967 + -2.2 1,654,967 + -1.8 1,654,967 + -1.6 1,654,967 + -1.3 1,654,967 + -3.2 1,654,967 + +0.2 1,654,967 + -2.9 1,654,967 + -3.6 1,654,968 - -1.4 1,654,968 - -1.6 1,654,968 - -1.3 1,654,968 - -2.3 1,654,968 - -3.5 1,654,968 - -1.9 1,654,968 - -1.3 1,654,968 - -1.4 1,654,968 - -2.9 1,654,968 - -1.0 1,654,968 - -1.4 1,654,973 + -1.4 1,654,973 + -1.2 1,654,973 + -1.8 1,654,973 + -1.3 1,654,973 + -2.4 1,654,974 - -1.0 1,654,974 - +1.5 1,654,974 - -0.5 1,654,974 - -0.8 1,654,974 - +1.5 1,654,974 - -1.6 1,654,974 - -0.7 1,654,974 - -2.6 1,654,974 - -0.5 1,654,974 - -2.4 1,654,974 - -2.9
Or see this region's nucleotide sequence