Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05085

Experiment: Adenosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_05080 and AO353_05085 are separated by 168 nucleotidesAO353_05085 and AO353_05090 are separated by 102 nucleotides AO353_05080: AO353_05080 - sulfate adenylyltransferase, at 1,121,523 to 1,122,440 _05080 AO353_05085: AO353_05085 - metal-binding protein, at 1,122,609 to 1,123,367 _05085 AO353_05090: AO353_05090 - 2-alkenal reductase, at 1,123,470 to 1,124,624 _05090 Position (kb) 1122 1123 1124Strain fitness (log2 ratio) -2 -1 0 1 2at 1121.818 kb on + strand, within AO353_05080at 1121.819 kb on - strand, within AO353_05080at 1121.819 kb on - strand, within AO353_05080at 1121.819 kb on - strand, within AO353_05080at 1121.819 kb on - strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.848 kb on + strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.849 kb on - strand, within AO353_05080at 1121.854 kb on + strand, within AO353_05080at 1121.854 kb on + strand, within AO353_05080at 1121.854 kb on + strand, within AO353_05080at 1121.854 kb on + strand, within AO353_05080at 1121.854 kb on + strand, within AO353_05080at 1121.854 kb on + strand, within AO353_05080at 1121.854 kb on + strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.855 kb on - strand, within AO353_05080at 1121.896 kb on - strand, within AO353_05080at 1121.998 kb on + strand, within AO353_05080at 1121.998 kb on + strand, within AO353_05080at 1122.067 kb on + strand, within AO353_05080at 1122.067 kb on + strand, within AO353_05080at 1122.068 kb on - strand, within AO353_05080at 1122.068 kb on - strand, within AO353_05080at 1122.068 kb on - strand, within AO353_05080at 1122.175 kb on + strand, within AO353_05080at 1122.175 kb on + strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.176 kb on - strand, within AO353_05080at 1122.226 kb on + strand, within AO353_05080at 1122.226 kb on + strand, within AO353_05080at 1122.226 kb on + strand, within AO353_05080at 1122.226 kb on + strand, within AO353_05080at 1122.226 kb on + strand, within AO353_05080at 1122.226 kb on + strand, within AO353_05080at 1122.226 kb on + strand, within AO353_05080at 1122.227 kb on - strand, within AO353_05080at 1122.227 kb on - strand, within AO353_05080at 1122.227 kb on - strand, within AO353_05080at 1122.227 kb on - strand, within AO353_05080at 1122.343 kb on + strand, within AO353_05080at 1122.343 kb on + strand, within AO353_05080at 1122.343 kb on + strand, within AO353_05080at 1122.344 kb on - strand, within AO353_05080at 1122.344 kb on - strand, within AO353_05080at 1122.344 kb on - strandat 1122.344 kb on - strand, within AO353_05080at 1122.344 kb on - strand, within AO353_05080at 1122.445 kb on - strandat 1122.462 kb on + strandat 1122.462 kb on + strandat 1122.462 kb on + strandat 1122.462 kb on + strandat 1122.463 kb on - strandat 1122.463 kb on - strandat 1122.463 kb on - strandat 1122.463 kb on - strandat 1122.463 kb on - strandat 1122.463 kb on - strandat 1122.501 kb on - strandat 1122.501 kb on - strandat 1122.501 kb on - strandat 1122.518 kb on + strandat 1122.519 kb on - strandat 1122.519 kb on - strandat 1122.519 kb on - strandat 1122.519 kb on - strandat 1122.519 kb on - strandat 1122.519 kb on - strandat 1122.534 kb on + strandat 1122.549 kb on + strandat 1122.549 kb on + strandat 1122.549 kb on + strandat 1122.555 kb on + strandat 1122.556 kb on - strandat 1122.557 kb on + strandat 1122.557 kb on + strandat 1122.557 kb on + strandat 1122.557 kb on + strandat 1122.557 kb on + strandat 1122.557 kb on + strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.558 kb on - strandat 1122.667 kb on + strandat 1122.667 kb on + strandat 1122.667 kb on + strandat 1122.785 kb on - strand, within AO353_05085at 1122.785 kb on - strand, within AO353_05085at 1122.785 kb on - strand, within AO353_05085at 1122.785 kb on - strand, within AO353_05085at 1122.820 kb on + strand, within AO353_05085at 1122.820 kb on + strand, within AO353_05085at 1122.820 kb on + strand, within AO353_05085at 1122.820 kb on + strand, within AO353_05085at 1122.820 kb on + strand, within AO353_05085at 1122.820 kb on + strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.821 kb on - strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.938 kb on + strand, within AO353_05085at 1122.939 kb on - strand, within AO353_05085at 1122.939 kb on - strand, within AO353_05085at 1122.939 kb on - strand, within AO353_05085at 1122.939 kb on - strand, within AO353_05085at 1122.939 kb on - strand, within AO353_05085at 1122.939 kb on - strand, within AO353_05085at 1122.939 kb on - strand, within AO353_05085at 1123.118 kb on + strand, within AO353_05085at 1123.118 kb on + strand, within AO353_05085at 1123.118 kb on + strand, within AO353_05085at 1123.118 kb on + strand, within AO353_05085at 1123.119 kb on - strand, within AO353_05085at 1123.119 kb on - strand, within AO353_05085at 1123.130 kb on + strand, within AO353_05085at 1123.176 kb on + strand, within AO353_05085at 1123.176 kb on + strand, within AO353_05085at 1123.177 kb on - strand, within AO353_05085at 1123.324 kb on + strandat 1123.324 kb on + strandat 1123.325 kb on - strandat 1123.341 kb on + strandat 1123.342 kb on - strandat 1123.367 kb on + strandat 1123.367 kb on + strandat 1123.368 kb on - strandat 1123.378 kb on + strandat 1123.378 kb on + strandat 1123.378 kb on + strandat 1123.378 kb on + strandat 1123.378 kb on + strandat 1123.378 kb on + strandat 1123.379 kb on - strandat 1123.379 kb on - strandat 1123.379 kb on - strandat 1123.379 kb on - strandat 1123.379 kb on - strandat 1123.379 kb on - strandat 1123.382 kb on + strandat 1123.383 kb on - strandat 1123.383 kb on - strandat 1123.383 kb on - strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.411 kb on + strandat 1123.412 kb on - strandat 1123.412 kb on - strandat 1123.412 kb on - strandat 1123.412 kb on - strandat 1123.412 kb on - strandat 1123.412 kb on - strandat 1123.412 kb on - strandat 1123.412 kb on - strandat 1123.413 kb on + strandat 1123.413 kb on + strandat 1123.414 kb on - strandat 1123.414 kb on - strandat 1123.414 kb on - strandat 1123.414 kb on - strandat 1123.426 kb on + strandat 1123.633 kb on - strand, within AO353_05090at 1123.677 kb on + strand, within AO353_05090at 1123.677 kb on + strand, within AO353_05090at 1123.677 kb on + strand, within AO353_05090at 1123.677 kb on + strand, within AO353_05090at 1123.677 kb on + strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.678 kb on - strand, within AO353_05090at 1123.818 kb on + strand, within AO353_05090at 1123.819 kb on - strand, within AO353_05090at 1124.103 kb on + strand, within AO353_05090at 1124.103 kb on + strand, within AO353_05090at 1124.103 kb on + strand, within AO353_05090at 1124.103 kb on + strand, within AO353_05090at 1124.103 kb on + strand, within AO353_05090at 1124.103 kb on + strand, within AO353_05090at 1124.103 kb on + strand, within AO353_05090at 1124.104 kb on - strand, within AO353_05090at 1124.104 kb on - strand, within AO353_05090at 1124.104 kb on - strand, within AO353_05090at 1124.104 kb on - strand, within AO353_05090at 1124.104 kb on - strand, within AO353_05090at 1124.165 kb on - strand, within AO353_05090at 1124.359 kb on - strand, within AO353_05090

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (N)
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1,121,818 + AO353_05080 0.32 -0.2
1,121,819 - AO353_05080 0.32 +0.1
1,121,819 - AO353_05080 0.32 -0.4
1,121,819 - AO353_05080 0.32 -0.4
1,121,819 - AO353_05080 0.32 -0.0
1,121,848 + AO353_05080 0.35 +0.4
1,121,848 + AO353_05080 0.35 -0.8
1,121,848 + AO353_05080 0.35 -0.3
1,121,848 + AO353_05080 0.35 +0.5
1,121,848 + AO353_05080 0.35 +0.1
1,121,848 + AO353_05080 0.35 -0.3
1,121,848 + AO353_05080 0.35 -0.2
1,121,848 + AO353_05080 0.35 -1.7
1,121,848 + AO353_05080 0.35 -0.1
1,121,849 - AO353_05080 0.36 -1.6
1,121,849 - AO353_05080 0.36 +0.1
1,121,849 - AO353_05080 0.36 -0.7
1,121,849 - AO353_05080 0.36 -1.8
1,121,849 - AO353_05080 0.36 +0.5
1,121,849 - AO353_05080 0.36 -0.9
1,121,849 - AO353_05080 0.36 -0.6
1,121,849 - AO353_05080 0.36 -1.3
1,121,849 - AO353_05080 0.36 -1.3
1,121,849 - AO353_05080 0.36 -0.4
1,121,849 - AO353_05080 0.36 -1.7
1,121,849 - AO353_05080 0.36 -1.8
1,121,849 - AO353_05080 0.36 -2.0
1,121,849 - AO353_05080 0.36 -1.2
1,121,854 + AO353_05080 0.36 +0.5
1,121,854 + AO353_05080 0.36 +0.0
1,121,854 + AO353_05080 0.36 -0.9
1,121,854 + AO353_05080 0.36 -0.5
1,121,854 + AO353_05080 0.36 +0.0
1,121,854 + AO353_05080 0.36 -0.8
1,121,854 + AO353_05080 0.36 -0.9
1,121,855 - AO353_05080 0.36 -2.1
1,121,855 - AO353_05080 0.36 +0.7
1,121,855 - AO353_05080 0.36 -0.9
1,121,855 - AO353_05080 0.36 -0.1
1,121,855 - AO353_05080 0.36 -0.5
1,121,855 - AO353_05080 0.36 -1.7
1,121,855 - AO353_05080 0.36 +0.7
1,121,855 - AO353_05080 0.36 +0.3
1,121,855 - AO353_05080 0.36 -0.5
1,121,896 - AO353_05080 0.41 -1.7
1,121,998 + AO353_05080 0.52 -0.6
1,121,998 + AO353_05080 0.52 -0.6
1,122,067 + AO353_05080 0.59 -0.0
1,122,067 + AO353_05080 0.59 -0.9
1,122,068 - AO353_05080 0.59 +0.2
1,122,068 - AO353_05080 0.59 -1.2
1,122,068 - AO353_05080 0.59 -0.7
1,122,175 + AO353_05080 0.71 +1.0
1,122,175 + AO353_05080 0.71 -0.5
1,122,176 - AO353_05080 0.71 -1.1
1,122,176 - AO353_05080 0.71 -0.0
1,122,176 - AO353_05080 0.71 -0.2
1,122,176 - AO353_05080 0.71 +0.5
1,122,176 - AO353_05080 0.71 -1.0
1,122,176 - AO353_05080 0.71 +0.5
1,122,176 - AO353_05080 0.71 -0.0
1,122,176 - AO353_05080 0.71 -0.7
1,122,226 + AO353_05080 0.77 -0.8
1,122,226 + AO353_05080 0.77 -0.9
1,122,226 + AO353_05080 0.77 +1.5
1,122,226 + AO353_05080 0.77 +0.5
1,122,226 + AO353_05080 0.77 -0.7
1,122,226 + AO353_05080 0.77 +0.1
1,122,226 + AO353_05080 0.77 -0.5
1,122,227 - AO353_05080 0.77 -0.2
1,122,227 - AO353_05080 0.77 -0.0
1,122,227 - AO353_05080 0.77 -0.1
1,122,227 - AO353_05080 0.77 -0.2
1,122,343 + AO353_05080 0.89 -1.5
1,122,343 + AO353_05080 0.89 +0.7
1,122,343 + AO353_05080 0.89 +0.7
1,122,344 - AO353_05080 0.89 -0.2
1,122,344 - AO353_05080 0.89 -1.1
1,122,344 - +0.5
1,122,344 - AO353_05080 0.89 -0.0
1,122,344 - AO353_05080 0.89 -1.4
1,122,445 - +1.3
1,122,462 + -0.6
1,122,462 + -0.9
1,122,462 + -0.1
1,122,462 + -0.4
1,122,463 - +0.3
1,122,463 - +0.6
1,122,463 - -2.0
1,122,463 - -1.7
1,122,463 - +0.2
1,122,463 - -1.2
1,122,501 - +0.2
1,122,501 - -0.6
1,122,501 - +0.5
1,122,518 + -1.4
1,122,519 - -0.3
1,122,519 - +1.1
1,122,519 - +0.0
1,122,519 - -2.0
1,122,519 - +0.2
1,122,519 - +1.7
1,122,534 + -0.6
1,122,549 + -1.1
1,122,549 + +0.1
1,122,549 + -0.6
1,122,555 + +0.7
1,122,556 - -0.2
1,122,557 + +0.4
1,122,557 + -0.3
1,122,557 + -0.8
1,122,557 + -0.5
1,122,557 + -1.7
1,122,557 + -0.4
1,122,558 - +1.2
1,122,558 - -0.7
1,122,558 - -0.3
1,122,558 - +0.6
1,122,558 - +0.1
1,122,558 - -2.3
1,122,558 - +0.3
1,122,558 - -0.5
1,122,558 - +0.5
1,122,667 + -0.6
1,122,667 + +0.0
1,122,667 + +1.2
1,122,785 - AO353_05085 0.23 -1.4
1,122,785 - AO353_05085 0.23 +0.3
1,122,785 - AO353_05085 0.23 +0.4
1,122,785 - AO353_05085 0.23 +0.7
1,122,820 + AO353_05085 0.28 +0.1
1,122,820 + AO353_05085 0.28 +0.7
1,122,820 + AO353_05085 0.28 -0.2
1,122,820 + AO353_05085 0.28 +0.7
1,122,820 + AO353_05085 0.28 +0.4
1,122,820 + AO353_05085 0.28 -0.2
1,122,821 - AO353_05085 0.28 +0.2
1,122,821 - AO353_05085 0.28 +0.1
1,122,821 - AO353_05085 0.28 +0.0
1,122,821 - AO353_05085 0.28 +1.8
1,122,821 - AO353_05085 0.28 +0.4
1,122,821 - AO353_05085 0.28 +1.2
1,122,821 - AO353_05085 0.28 +0.5
1,122,821 - AO353_05085 0.28 -0.4
1,122,821 - AO353_05085 0.28 +0.6
1,122,821 - AO353_05085 0.28 -1.8
1,122,821 - AO353_05085 0.28 -1.2
1,122,821 - AO353_05085 0.28 -0.5
1,122,821 - AO353_05085 0.28 +0.3
1,122,821 - AO353_05085 0.28 -0.9
1,122,821 - AO353_05085 0.28 +0.5
1,122,938 + AO353_05085 0.43 -0.2
1,122,938 + AO353_05085 0.43 -0.4
1,122,938 + AO353_05085 0.43 +0.5
1,122,938 + AO353_05085 0.43 +0.4
1,122,938 + AO353_05085 0.43 +0.7
1,122,938 + AO353_05085 0.43 +0.6
1,122,938 + AO353_05085 0.43 +1.0
1,122,938 + AO353_05085 0.43 -0.3
1,122,939 - AO353_05085 0.43 -0.8
1,122,939 - AO353_05085 0.43 -0.3
1,122,939 - AO353_05085 0.43 +0.1
1,122,939 - AO353_05085 0.43 -0.0
1,122,939 - AO353_05085 0.43 +0.3
1,122,939 - AO353_05085 0.43 -0.1
1,122,939 - AO353_05085 0.43 +0.4
1,123,118 + AO353_05085 0.67 -0.2
1,123,118 + AO353_05085 0.67 +1.3
1,123,118 + AO353_05085 0.67 +1.1
1,123,118 + AO353_05085 0.67 -0.3
1,123,119 - AO353_05085 0.67 +0.8
1,123,119 - AO353_05085 0.67 -0.0
1,123,130 + AO353_05085 0.69 -0.1
1,123,176 + AO353_05085 0.75 -0.8
1,123,176 + AO353_05085 0.75 +0.7
1,123,177 - AO353_05085 0.75 +0.2
1,123,324 + -1.6
1,123,324 + +0.0
1,123,325 - +1.0
1,123,341 + -0.5
1,123,342 - -0.0
1,123,367 + +0.4
1,123,367 + -1.1
1,123,368 - +0.3
1,123,378 + +0.5
1,123,378 + -0.7
1,123,378 + +0.2
1,123,378 + +0.8
1,123,378 + +1.1
1,123,378 + -0.5
1,123,379 - -0.3
1,123,379 - +0.0
1,123,379 - +0.6
1,123,379 - -0.1
1,123,379 - -1.2
1,123,379 - -0.6
1,123,382 + +1.1
1,123,383 - -0.9
1,123,383 - +0.2
1,123,383 - -0.2
1,123,411 + -0.5
1,123,411 + +1.4
1,123,411 + +0.3
1,123,411 + -0.5
1,123,411 + -1.0
1,123,411 + +0.2
1,123,411 + +0.4
1,123,411 + +1.5
1,123,411 + +0.2
1,123,411 + +0.7
1,123,411 + +0.4
1,123,412 - -0.2
1,123,412 - -1.5
1,123,412 - -0.9
1,123,412 - -0.3
1,123,412 - +0.0
1,123,412 - -0.8
1,123,412 - -1.4
1,123,412 - -0.6
1,123,413 + +0.4
1,123,413 + -1.2
1,123,414 - -1.5
1,123,414 - -1.0
1,123,414 - -1.3
1,123,414 - -1.3
1,123,426 + -1.4
1,123,633 - AO353_05090 0.14 -1.4
1,123,677 + AO353_05090 0.18 +0.1
1,123,677 + AO353_05090 0.18 +0.1
1,123,677 + AO353_05090 0.18 +1.1
1,123,677 + AO353_05090 0.18 +0.1
1,123,677 + AO353_05090 0.18 -0.5
1,123,678 - AO353_05090 0.18 -0.5
1,123,678 - AO353_05090 0.18 +0.7
1,123,678 - AO353_05090 0.18 -0.4
1,123,678 - AO353_05090 0.18 -0.0
1,123,678 - AO353_05090 0.18 +1.0
1,123,678 - AO353_05090 0.18 -0.1
1,123,678 - AO353_05090 0.18 +1.6
1,123,678 - AO353_05090 0.18 -2.4
1,123,818 + AO353_05090 0.30 -1.0
1,123,819 - AO353_05090 0.30 -0.2
1,124,103 + AO353_05090 0.55 -1.1
1,124,103 + AO353_05090 0.55 -1.7
1,124,103 + AO353_05090 0.55 -0.5
1,124,103 + AO353_05090 0.55 -0.5
1,124,103 + AO353_05090 0.55 +0.8
1,124,103 + AO353_05090 0.55 +0.4
1,124,103 + AO353_05090 0.55 +0.8
1,124,104 - AO353_05090 0.55 +1.2
1,124,104 - AO353_05090 0.55 -1.1
1,124,104 - AO353_05090 0.55 -0.7
1,124,104 - AO353_05090 0.55 -2.2
1,124,104 - AO353_05090 0.55 -0.7
1,124,165 - AO353_05090 0.60 -1.3
1,124,359 - AO353_05090 0.77 +0.1

Or see this region's nucleotide sequence