Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2661

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
3,315,494	-				-1.7
3,315,564	+				-1.2
3,315,615	+		BT2660	0.16	-1.5
3,315,700	-		BT2660	0.31	-1.5
3,315,700	-		BT2660	0.31	-1.3
3,315,755	+		BT2660	0.40	-0.7
3,315,802	+		BT2660	0.48	+0.0
3,315,802	+		BT2660	0.48	-2.7
3,315,802	+		BT2660	0.48	-1.0
3,315,804	+		BT2660	0.48	-0.8
3,315,805	-		BT2660	0.49	+1.5
3,315,901	+		BT2660	0.65	-0.5
3,315,930	+		BT2660	0.70	-2.0
3,315,930	+		BT2660	0.70	-0.8
3,315,931	-		BT2660	0.70	+0.0
3,315,934	+		BT2660	0.70	-1.6
3,316,001	-		BT2660	0.82	-1.3
3,316,008	+		BT2660	0.83	+1.1
3,316,008	+		BT2660	0.83	+0.8
3,316,009	-		BT2660	0.83	+2.5
3,316,031	+		BT2660	0.87	-0.8
3,316,128	+				-0.9
3,316,153	+				-3.5
3,316,176	+				-1.2
3,316,321	+				-0.8
3,316,368	-				-0.8
3,316,372	-				+0.8
3,316,507	+				-1.3
3,316,518	+		BT2661	0.14	-0.5
3,316,529	+		BT2661	0.20	-0.7
3,316,530	-		BT2661	0.21	+0.9
3,316,538	+		BT2661	0.25	-0.7
3,316,571	+		BT2661	0.42	-2.5
3,316,650	+		BT2661	0.82	-1.6
3,316,652	+		BT2661	0.83	-3.4
3,316,664	+				+0.5
3,316,672	+				-1.7
3,316,685	+				-0.2
3,316,717	+				-0.8
3,316,798	+				-1.6
3,316,895	+				-1.3
3,317,038	-				-0.9
3,317,063	+				+2.1
3,317,105	+				-0.5
3,317,125	-				-0.4
3,317,134	+				-1.1
3,317,134	+				+1.5
3,317,161	-				-1.5
3,317,185	+				-0.8
3,317,226	-				-0.8
3,317,238	-				-1.1
3,317,238	-				-2.2
3,317,244	+				-0.8
3,317,244	+				-2.3
3,317,305	-				-1.0
3,317,353	-				-0.1
3,317,413	+				-1.0
3,317,414	-				-0.1
3,317,414	-				-0.5
3,317,419	-				-1.1
3,317,419	-				-1.4
3,317,419	-				-0.1
3,317,422	-				-1.0
3,317,422	-				-1.3
3,317,519	+		BT2662	0.14	-2.1
3,317,519	+		BT2662	0.14	-0.6
3,317,520	-		BT2662	0.14	+0.4
3,317,520	-		BT2662	0.14	-1.0
3,317,523	+		BT2662	0.14	-1.1
3,317,524	-		BT2662	0.14	-1.8
3,317,548	+				+3.8
3,317,548	+		BT2662	0.16	-0.5
3,317,548	+		BT2662	0.16	-1.3
3,317,551	-		BT2662	0.16	-1.3
3,317,551	-		BT2662	0.16	-1.3
3,317,581	-		BT2662	0.18	-3.0
3,317,606	+		BT2662	0.20	-0.6
3,317,606	+		BT2662	0.20	-1.4
3,317,621	-		BT2662	0.21	-0.5
3,317,621	-		BT2662	0.21	-0.8
3,317,651	-		BT2662	0.23	-0.5
3,317,684	+		BT2662	0.25	-0.6