Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1396

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,722,293	-		BT1395	0.22	+1.0
1,722,296	-		BT1395	0.23	+0.2
1,722,418	+		BT1395	0.34	-2.1
1,722,608	-		BT1395	0.53	-0.1
1,722,614	-		BT1395	0.53	+0.0
1,722,638	-		BT1395	0.55	+0.0
1,722,670	+		BT1395	0.59	+0.0
1,722,708	+		BT1395	0.62	+0.0
1,722,804	+		BT1395	0.71	+0.2
1,722,880	+				+0.0
1,723,105	+				-0.9
1,723,106	-				-1.5
1,723,108	+				-0.4
1,723,188	+				-0.2
1,723,251	+				-1.3
1,723,488	+				-1.2
1,723,495	-		BT1396	0.24	-1.8
1,723,603	+		BT1396	0.35	-1.7
1,723,604	-		BT1396	0.36	-0.8
1,723,638	+		BT1396	0.39	-1.7
1,723,638	+		BT1396	0.39	-0.4
1,723,784	-		BT1396	0.55	-1.0
1,723,784	-		BT1396	0.55	-1.8
1,723,815	+		BT1396	0.58	-0.4
1,723,846	+		BT1396	0.62	-1.4
1,723,890	+		BT1396	0.67	+0.9
1,723,938	+		BT1396	0.72	+0.0
1,723,939	-		BT1396	0.72	-1.5
1,723,971	+		BT1396	0.75	-0.7
1,724,208	-				-1.8
1,724,301	+		BT1397	0.13	+0.6
1,724,330	-		BT1397	0.16	-0.4
1,724,339	+		BT1397	0.17	-1.0
1,724,419	+		BT1397	0.26	-2.5
1,724,420	-		BT1397	0.26	+1.3
1,724,578	+		BT1397	0.43	+0.6
1,724,612	+		BT1397	0.46	+0.0
1,724,613	-		BT1397	0.46	-0.9
1,724,695	-		BT1397	0.55	+0.3
1,724,750	+		BT1397	0.61	-0.7
1,724,796	-		BT1397	0.66	+0.3
1,724,806	-		BT1397	0.67	-1.8
1,724,806	-		BT1397	0.67	+0.6
1,724,811	-		BT1397	0.67	-0.8
1,724,811	-		BT1397	0.67	-0.7
1,724,861	+		BT1397	0.72	-0.4
1,724,861	+		BT1397	0.72	-0.4
1,724,862	-		BT1397	0.72	+0.3
1,724,882	+		BT1397	0.75	-2.4
1,724,883	-		BT1397	0.75	-0.8
1,724,942	-		BT1397	0.81	-2.2
1,725,054	+				+0.0
1,725,070	+				+0.6
1,725,081	-				+0.0
1,725,169	-				-0.9