Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1072

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,358,754	+		BT1071	0.29	+0.1
1,358,822	-		BT1071	0.46	+0.0
1,358,875	-		BT1071	0.59	+0.9
1,358,947	-				+0.7
1,358,960	-		BT1071	0.80	+1.1
1,359,032	-				-0.9
1,359,148	+				-0.3
1,359,193	+				-0.3
1,359,217	+				+2.2
1,359,224	+				+0.1
1,359,330	-				-1.0
1,359,410	+				-1.3
1,359,465	-				-0.7
1,359,510	+				+1.2
1,359,510	+				+0.6
1,359,557	+				+0.6
1,359,873	+		BT1072	0.27	+2.2
1,359,913	-		BT1072	0.34	-1.8
1,360,066	+		BT1072	0.62	-1.4
1,360,096	-		BT1072	0.67	-1.9
1,360,331	-				+0.1
1,360,362	-				-0.4
1,360,407	-				-2.4
1,360,650	+		BT1073	0.42	-0.2
1,360,732	+		BT1073	0.54	-0.8
1,360,772	-		BT1073	0.61	-1.7
1,360,820	-		BT1073	0.68	-0.9
1,360,831	-		BT1073	0.70	-0.4
1,360,882	-		BT1073	0.78	-1.4
1,360,922	-		BT1073	0.84	-0.1
1,360,954	+		BT1073	0.89	+0.2
1,360,956	+		BT1073	0.89	+0.1
1,360,957	-		BT1073	0.89	-0.3
1,361,104	-		BT1074	0.11	-0.2
1,361,112	-		BT1074	0.12	+1.6
1,361,115	+		BT1074	0.12	-0.9
1,361,116	-		BT1074	0.12	-0.2
1,361,232	+		BT1074	0.31	+0.1