Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0396 and BT0397 are separated by 5 nucleotides BT0397 and BT0398 are separated by 41 nucleotides BT0398 and BT0399 are separated by 12 nucleotides
BT0396: BT0396 - putative UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI ptt file), at 485,128 to 486,117
BT0396
BT0397: BT0397 - conserved hypothetical protein (NCBI ptt file), at 486,123 to 486,569
BT0397
BT0398: BT0398 - polysaccharide export outer membrane protein (NCBI ptt file), at 486,611 to 487,405
BT0398
BT0399: BT0399 - tyrosine-protein kinase ptk involved in exopolysaccharide biosynthesis (NCBI ptt file), at 487,418 to 488,563
BT0399
Position (kb) 486
487
488 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 485.628 kb on + strand, within BT0396 at 485.802 kb on - strand, within BT0396 at 485.925 kb on - strand, within BT0396 at 485.940 kb on + strand, within BT0396 at 486.028 kb on - strand at 486.049 kb on - strand at 486.084 kb on - strand at 486.305 kb on - strand, within BT0397 at 486.463 kb on + strand, within BT0397 at 486.534 kb on + strand at 486.693 kb on - strand, within BT0398 at 486.693 kb on - strand, within BT0398 at 486.714 kb on + strand, within BT0398 at 486.717 kb on + strand, within BT0398 at 486.720 kb on - strand, within BT0398 at 486.784 kb on - strand, within BT0398 at 486.793 kb on + strand, within BT0398 at 486.836 kb on - strand, within BT0398 at 486.847 kb on + strand, within BT0398 at 486.891 kb on - strand, within BT0398 at 487.015 kb on - strand, within BT0398 at 487.142 kb on - strand, within BT0398 at 487.150 kb on - strand, within BT0398 at 487.171 kb on + strand, within BT0398 at 487.283 kb on + strand, within BT0398 at 487.283 kb on + strand, within BT0398 at 487.399 kb on - strand at 487.497 kb on - strand at 487.519 kb on + strand at 487.537 kb on - strand, within BT0399 at 487.661 kb on - strand, within BT0399 at 487.771 kb on - strand, within BT0399 at 487.771 kb on - strand, within BT0399 at 487.894 kb on - strand, within BT0399 at 487.909 kb on + strand, within BT0399 at 487.909 kb on - strand, within BT0399 at 487.917 kb on + strand, within BT0399 at 487.925 kb on - strand, within BT0399 at 487.929 kb on + strand, within BT0399 at 488.077 kb on + strand, within BT0399 at 488.080 kb on - strand, within BT0399 at 488.137 kb on + strand, within BT0399 at 488.312 kb on - strand, within BT0399 at 488.375 kb on - strand, within BT0399
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 485,628 + BT0396 0.51 -0.9 485,802 - BT0396 0.68 +1.6 485,925 - BT0396 0.81 +0.6 485,940 + BT0396 0.82 +0.4 486,028 - -0.2 486,049 - -0.7 486,084 - -0.8 486,305 - BT0397 0.41 +0.2 486,463 + BT0397 0.76 -0.4 486,534 + -0.7 486,693 - BT0398 0.10 -1.7 486,693 - BT0398 0.10 -0.2 486,714 + BT0398 0.13 -1.7 486,717 + BT0398 0.13 +1.6 486,720 - BT0398 0.14 -1.9 486,784 - BT0398 0.22 -0.7 486,793 + BT0398 0.23 -1.4 486,836 - BT0398 0.28 +0.1 486,847 + BT0398 0.30 -0.2 486,891 - BT0398 0.35 -0.9 487,015 - BT0398 0.51 -2.1 487,142 - BT0398 0.67 -0.7 487,150 - BT0398 0.68 +2.6 487,171 + BT0398 0.70 +3.2 487,283 + BT0398 0.85 -2.2 487,283 + BT0398 0.85 -0.4 487,399 - +1.3 487,497 - +0.2 487,519 + -0.7 487,537 - BT0399 0.10 -0.1 487,661 - BT0399 0.21 -0.6 487,771 - BT0399 0.31 -0.4 487,771 - BT0399 0.31 -1.7 487,894 - BT0399 0.42 -0.6 487,909 + BT0399 0.43 -1.0 487,909 - BT0399 0.43 -1.2 487,917 + BT0399 0.44 -1.0 487,925 - BT0399 0.44 -1.4 487,929 + BT0399 0.45 -0.8 488,077 + BT0399 0.58 +1.0 488,080 - BT0399 0.58 +1.6 488,137 + BT0399 0.63 -0.5 488,312 - BT0399 0.78 -0.4 488,375 - BT0399 0.84 +1.9
Or see this region's nucleotide sequence