Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0230 and BT0231 are separated by 37 nucleotides BT0231 and BT0232 are separated by 108 nucleotides BT0232 and BT0233 are separated by 366 nucleotides
BT0230: BT0230 - conserved hypothetical protein (NCBI ptt file), at 250,714 to 252,072
BT0230
BT0231: BT0231 - excisionase (NCBI ptt file), at 252,110 to 252,481
BT0231
BT0232: BT0232 - putative protein involved in transposition (NCBI ptt file), at 252,590 to 253,357
BT0232
BT0233: BT0233 - integrase (NCBI ptt file), at 253,724 to 254,845
BT0233
Position (kb) 252
253
254 Strain fitness (log2 ratio) -2
-1
0
1 at 251.606 kb on + strand, within BT0230 at 251.866 kb on - strand, within BT0230 at 251.907 kb on + strand, within BT0230 at 251.963 kb on + strand at 251.999 kb on - strand at 252.085 kb on - strand at 252.347 kb on - strand, within BT0231 at 252.350 kb on + strand, within BT0231 at 252.351 kb on - strand, within BT0231 at 252.358 kb on + strand, within BT0231 at 252.653 kb on - strand at 252.906 kb on - strand, within BT0232 at 252.947 kb on - strand, within BT0232 at 252.965 kb on + strand, within BT0232 at 252.966 kb on - strand, within BT0232 at 253.020 kb on - strand, within BT0232 at 253.265 kb on + strand, within BT0232 at 253.268 kb on - strand, within BT0232 at 253.268 kb on - strand, within BT0232 at 253.274 kb on - strand, within BT0232 at 253.327 kb on + strand at 253.353 kb on - strand at 253.359 kb on - strand at 253.464 kb on + strand at 253.645 kb on + strand at 253.712 kb on - strand at 253.990 kb on + strand, within BT0233 at 253.991 kb on - strand, within BT0233 at 254.033 kb on - strand, within BT0233 at 254.080 kb on - strand, within BT0233 at 254.101 kb on - strand, within BT0233 at 254.109 kb on - strand, within BT0233 at 254.156 kb on + strand, within BT0233
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 251,606 + BT0230 0.66 -1.4 251,866 - BT0230 0.85 -2.4 251,907 + BT0230 0.88 +0.6 251,963 + +0.3 251,999 - -0.4 252,085 - -1.0 252,347 - BT0231 0.64 -0.3 252,350 + BT0231 0.65 +1.1 252,351 - BT0231 0.65 +0.3 252,358 + BT0231 0.67 -1.0 252,653 - -0.0 252,906 - BT0232 0.41 -2.1 252,947 - BT0232 0.46 -0.0 252,965 + BT0232 0.49 -0.6 252,966 - BT0232 0.49 -1.4 253,020 - BT0232 0.56 -1.3 253,265 + BT0232 0.88 -0.0 253,268 - BT0232 0.88 -1.8 253,268 - BT0232 0.88 +1.6 253,274 - BT0232 0.89 -1.2 253,327 + +1.0 253,353 - +0.6 253,359 - -0.4 253,464 + +1.6 253,645 + -1.2 253,712 - -0.8 253,990 + BT0233 0.24 +0.4 253,991 - BT0233 0.24 -0.1 254,033 - BT0233 0.28 -0.0 254,080 - BT0233 0.32 +0.3 254,101 - BT0233 0.34 -0.6 254,109 - BT0233 0.34 -1.7 254,156 + BT0233 0.39 -1.1
Or see this region's nucleotide sequence