Strain Fitness in Pantoea sp. MT58 around IAI47_00535

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
121,084	+		IAI47_00530	0.14	+1.2
121,084	+		IAI47_00530	0.14	-0.1
121,085	-		IAI47_00530	0.15	-2.3
121,090	+		IAI47_00530	0.15	+0.1
121,090	+		IAI47_00530	0.15	-1.9
121,090	+		IAI47_00530	0.15	-0.5
121,090	+		IAI47_00530	0.15	+0.3
121,090	+		IAI47_00530	0.15	-0.1
121,090	+		IAI47_00530	0.15	-1.0
121,091	-		IAI47_00530	0.16	+0.8
121,091	-		IAI47_00530	0.16	+1.3
121,091	-		IAI47_00530	0.16	+1.8
121,132	+		IAI47_00530	0.22	-1.9
121,132	+		IAI47_00530	0.22	+1.8
121,133	-		IAI47_00530	0.22	-1.5
121,133	-		IAI47_00530	0.22	-1.3
121,133	-		IAI47_00530	0.22	+1.6
121,134	+		IAI47_00530	0.22	-3.9
121,134	+		IAI47_00530	0.22	-0.7
121,134	+		IAI47_00530	0.22	+1.2
121,134	+		IAI47_00530	0.22	+0.2
121,134	+		IAI47_00530	0.22	-3.7
121,134	+		IAI47_00530	0.22	+0.2
121,134	+		IAI47_00530	0.22	+0.3
121,134	+		IAI47_00530	0.22	-2.3
121,134	+		IAI47_00530	0.22	-1.6
121,134	+		IAI47_00530	0.22	-0.2
121,134	+		IAI47_00530	0.22	+0.7
121,134	+		IAI47_00530	0.22	-1.2
121,134	+		IAI47_00530	0.22	+0.3
121,134	+		IAI47_00530	0.22	+1.9
121,135	-		IAI47_00530	0.23	+1.3
121,135	-		IAI47_00530	0.23	+1.3
121,135	-		IAI47_00530	0.23	+0.3
121,135	-		IAI47_00530	0.23	-2.0
121,135	-		IAI47_00530	0.23	-2.1
121,135	-		IAI47_00530	0.23	-0.7
121,135	-		IAI47_00530	0.23	+0.7
121,135	-		IAI47_00530	0.23	-0.8
121,135	-		IAI47_00530	0.23	+0.7
121,135	-		IAI47_00530	0.23	+1.1
121,135	-		IAI47_00530	0.23	+1.1
121,135	-		IAI47_00530	0.23	+0.3
121,135	-		IAI47_00530	0.23	+1.8
121,135	-		IAI47_00530	0.23	-0.9
121,167	+		IAI47_00530	0.28	-3.2
121,168	-		IAI47_00530	0.28	+0.5
121,201	+		IAI47_00530	0.33	+0.3
121,202	-		IAI47_00530	0.33	-0.4
121,220	+		IAI47_00530	0.36	+1.7
121,221	-		IAI47_00530	0.37	+0.1
121,221	-		IAI47_00530	0.37	+0.6
121,221	-		IAI47_00530	0.37	-2.0
121,221	-		IAI47_00530	0.37	-1.5
121,240	+		IAI47_00530	0.40	+1.9
121,240	+		IAI47_00530	0.40	+1.5
121,241	-		IAI47_00530	0.40	+0.6
121,241	-		IAI47_00530	0.40	+1.3
121,253	+		IAI47_00530	0.42	+1.6
121,264	+		IAI47_00530	0.44	+1.2
121,264	+		IAI47_00530	0.44	-1.2
121,264	+		IAI47_00530	0.44	+0.0
121,265	-		IAI47_00530	0.44	+1.1
121,306	+		IAI47_00530	0.50	-0.5
121,422	+		IAI47_00530	0.69	-0.5
121,422	+		IAI47_00530	0.69	-0.6
121,422	+		IAI47_00530	0.69	-1.0
121,422	+		IAI47_00530	0.69	+0.8
121,422	+		IAI47_00530	0.69	+1.4
121,423	-		IAI47_00530	0.69	+1.9
121,423	-		IAI47_00530	0.69	+0.7
121,423	-		IAI47_00530	0.69	-1.3
121,423	-		IAI47_00530	0.69	+0.8
121,423	-		IAI47_00530	0.69	-1.1
121,423	-		IAI47_00530	0.69	+1.5
121,423	-		IAI47_00530	0.69	-0.9
121,423	-		IAI47_00530	0.69	-1.1
121,423	-		IAI47_00530	0.69	+1.2
121,423	-		IAI47_00530	0.69	+1.2
121,510	+		IAI47_00530	0.83	+1.1
121,510	+		IAI47_00530	0.83	+2.6
121,510	+		IAI47_00530	0.83	+0.6
121,510	+		IAI47_00530	0.83	+1.6
121,510	+		IAI47_00530	0.83	+1.8
121,510	+		IAI47_00530	0.83	+1.0
121,511	-		IAI47_00530	0.83	+1.1
121,511	-		IAI47_00530	0.83	-1.3
121,511	-		IAI47_00530	0.83	+0.5
121,511	-		IAI47_00530	0.83	+0.1
121,513	+		IAI47_00530	0.84	-0.4
121,513	+		IAI47_00530	0.84	+1.0
121,513	+		IAI47_00530	0.84	+0.7
121,513	+		IAI47_00530	0.84	+0.6
121,513	+		IAI47_00530	0.84	+1.8
121,513	+		IAI47_00530	0.84	+1.2
121,514	-		IAI47_00530	0.84	+0.5
121,514	-		IAI47_00530	0.84	-1.6
121,579	+				+1.5
121,580	-				+1.6
121,580	-				-3.1
121,583	-				-2.9
121,588	+				+1.5
121,588	+				-0.7
121,589	-				-1.9
121,593	+				-0.8
121,593	+				+1.1
121,593	+				-2.4
121,594	-				+1.0
121,594	-				-2.2
121,608	-				+1.7
121,608	-				+0.0
121,608	-				+0.0
121,608	-				-0.7
121,608	-				+1.2
121,612	+				+0.7
121,613	-				-0.5
121,613	-				-3.1
121,613	-				+0.4
121,613	-				-1.0
121,626	-				+1.8
121,626	-				-3.1
121,642	+				+1.8
121,642	+				+1.3
121,642	+				+1.2
121,642	+				+2.0
121,643	-				-1.6
121,643	-				-0.1
121,643	-				-1.0
121,643	-				+1.8
121,654	+				-3.6
121,655	-				+0.5
121,655	-				+1.6
121,707	+				-1.4
121,707	+				-0.6
121,707	+				-0.2
121,707	+				+0.8
121,707	+				+0.5
121,707	+				+1.0
121,708	-				-2.5
121,708	-				-2.9
121,708	-				+1.4
121,708	-				-0.2
121,708	-				+1.4
121,708	-				+2.6
121,708	-				+1.1
121,708	-				-2.2
121,708	-				+1.0
121,708	-				+2.4
121,708	-				+1.4
121,709	+				+0.5
121,709	+				+0.8
121,710	-				-1.2
121,710	-				-3.5
121,733	+				-2.9
121,733	+				-1.2
121,733	+				+1.1
121,733	+				-0.1
121,734	-				+0.4
121,734	-				+0.3
121,734	-				-3.8
121,781	-				+0.9
121,826	+				-1.7
121,826	+				+0.3
121,853	+				+0.8
121,853	+				+1.8
121,853	+				-0.7
121,853	+				+3.7
121,853	+				+1.0
121,907	+				+1.7
121,908	-				+0.5
121,930	+				+2.0
121,931	-				+1.0
121,931	-				+1.6
121,948	+				-0.3
121,949	-				-0.3
121,950	+				+0.5
121,951	-				-2.6
121,963	-				+0.2
121,987	-				-1.9
122,031	-				-1.7
122,038	+				+1.5
122,038	+				+0.3
122,044	-				+1.2
122,047	-				-1.4
122,087	-				-3.3
122,095	-				-3.2
122,121	+		IAI47_00535	0.12	+1.4
122,121	+		IAI47_00535	0.12	-1.5
122,121	+		IAI47_00535	0.12	+0.9
122,122	-		IAI47_00535	0.12	+2.5
122,122	-		IAI47_00535	0.12	+0.5
122,122	-		IAI47_00535	0.12	-1.4
122,122	-		IAI47_00535	0.12	+0.9
122,122	-		IAI47_00535	0.12	-1.3
122,124	+		IAI47_00535	0.12	-1.7
122,125	-		IAI47_00535	0.12	-1.2
122,125	-		IAI47_00535	0.12	+1.3
122,130	+		IAI47_00535	0.13	+1.8
122,130	+		IAI47_00535	0.13	+2.1
122,130	+		IAI47_00535	0.13	+1.8
122,130	+		IAI47_00535	0.13	-0.7
122,180	+		IAI47_00535	0.21	-1.1
122,180	+		IAI47_00535	0.21	+0.7
122,181	-		IAI47_00535	0.21	-1.1
122,183	+		IAI47_00535	0.21	-1.2
122,184	-		IAI47_00535	0.22	-1.8
122,206	+		IAI47_00535	0.25	+0.4
122,207	-		IAI47_00535	0.25	+2.8
122,211	-		IAI47_00535	0.26	+0.8
122,234	+		IAI47_00535	0.29	-0.1
122,235	-		IAI47_00535	0.29	-1.2
122,266	+		IAI47_00535	0.34	-2.9
122,266	+		IAI47_00535	0.34	-0.2
122,266	+		IAI47_00535	0.34	-1.0
122,266	+		IAI47_00535	0.34	+0.5
122,267	-		IAI47_00535	0.34	+0.8
122,267	-		IAI47_00535	0.34	+1.2
122,267	-		IAI47_00535	0.34	-0.2
122,268	+		IAI47_00535	0.35	-2.1
122,269	-		IAI47_00535	0.35	+0.1
122,286	-		IAI47_00535	0.37	-3.3
122,288	+		IAI47_00535	0.38	-0.3
122,299	-		IAI47_00535	0.39	+2.0
122,299	-		IAI47_00535	0.39	-0.9
122,320	+		IAI47_00535	0.43	-0.4
122,321	-		IAI47_00535	0.43	+1.5
122,323	+		IAI47_00535	0.43	-0.1
122,323	+		IAI47_00535	0.43	-1.6
122,323	+		IAI47_00535	0.43	-0.2
122,324	-		IAI47_00535	0.43	-2.2
122,324	-		IAI47_00535	0.43	+1.2
122,437	+		IAI47_00535	0.61	-0.4
122,437	+		IAI47_00535	0.61	+2.3
122,437	+		IAI47_00535	0.61	+0.6
122,438	-		IAI47_00535	0.61	-1.2
122,438	-		IAI47_00535	0.61	-1.1
122,440	+		IAI47_00535	0.61	+2.4
122,448	+		IAI47_00535	0.62	+1.8
122,449	-		IAI47_00535	0.63	+2.7
122,467	+		IAI47_00535	0.65	-1.5
122,468	-		IAI47_00535	0.66	+0.3
122,479	+		IAI47_00535	0.67	-1.7
122,480	-		IAI47_00535	0.67	+1.1
122,480	-		IAI47_00535	0.67	+0.3
122,480	-		IAI47_00535	0.67	+0.5
122,480	-		IAI47_00535	0.67	-0.8
122,497	+		IAI47_00535	0.70	-1.7
122,497	+		IAI47_00535	0.70	+0.1
122,525	-		IAI47_00535	0.74	+1.6
122,525	-		IAI47_00535	0.74	-1.3
122,525	-		IAI47_00535	0.74	-2.9
122,525	-		IAI47_00535	0.74	+0.9
122,525	-		IAI47_00535	0.74	-1.5
122,537	+		IAI47_00535	0.76	-2.0
122,537	+		IAI47_00535	0.76	-1.5
122,537	+		IAI47_00535	0.76	-1.2
122,546	+		IAI47_00535	0.78	+0.4
122,547	-		IAI47_00535	0.78	+1.0
122,547	-		IAI47_00535	0.78	+1.4
122,548	+		IAI47_00535	0.78	-2.0
122,567	-		IAI47_00535	0.81	+1.2
122,662	+				-0.8
122,662	+				-0.8
122,665	+				+1.0
122,666	-				+1.0
122,666	-				+0.4
122,666	-				+0.0
122,681	+				+1.0
122,689	+				-2.0
122,692	+				+0.6
122,692	+				+1.8
122,693	-				-1.7
122,693	-				-3.1
122,693	-				+1.6
122,730	+				+2.1
122,770	-				-0.3
122,773	+				-1.2
122,805	-		IAI47_00540	0.12	-2.9
122,805	-		IAI47_00540	0.12	-3.9
122,826	+		IAI47_00540	0.20	-0.6
122,834	-		IAI47_00540	0.23	-1.5
122,867	+		IAI47_00540	0.36	-1.3
122,867	+		IAI47_00540	0.36	-0.7
123,061	-				-1.7
123,090	+				+1.5
123,091	-				+1.5
123,101	-				-0.1
123,104	+				-0.2
123,109	+				-0.8
123,163	+				-3.1
123,163	+				-2.5
123,163	+				-0.7
123,164	-				-1.2
123,176	+				-0.6
123,177	-				+0.7
123,180	-				+0.7
123,219	+				-0.9
123,219	+				-1.5
123,219	+				+1.7
123,220	-				-0.4
123,220	-				+2.1
123,224	+				-0.7
123,224	+				+0.8
123,225	-				-0.7
123,225	-				+1.2
123,225	-				+2.2
123,225	-				-1.6
123,225	-				+0.5
123,225	-				-4.0
123,225	-				-0.9
123,233	-				+1.5
123,233	-				+0.6
123,287	+				+0.7
123,287	+				-1.3
123,287	+				+2.6
123,288	-				+1.0
123,288	-				-1.0
123,288	-				+1.4
123,288	-				-0.1
123,302	+				-0.9
123,332	+				+0.8
123,332	+				-2.5
123,333	-				-0.3
123,333	-				+2.0
123,333	-				+0.8
123,333	-				-1.1
123,348	+				-0.5
123,348	+				+0.4
123,348	+				-0.2
123,349	-				+0.8
123,349	-				+3.2
123,357	-				-2.0
123,369	+				-1.6
123,370	-				+1.4
123,370	-				-0.7
123,370	-				+1.3
123,377	+				+0.6
123,378	-				-3.7
123,386	+				+0.8
123,386	+				+1.2
123,387	-				-0.0
123,387	-				+2.4
123,387	-				+0.3
123,387	-				-2.1
123,387	-				+1.1
123,387	-				-0.5
123,387	-				+0.9
123,393	+				+0.2
123,393	+				-0.1
123,394	-				-1.9
123,437	+				-1.3
123,437	+				-1.0
123,438	-				+0.5
123,438	-				+1.8
123,438	-				-1.6
123,441	+				+0.8
123,441	+				-0.2
123,441	+				+0.1
123,441	+				-1.1
123,441	+				-3.4
123,441	+				+1.0
123,442	-				-1.4
123,442	-				-2.0
123,442	-				+0.8
123,442	-				-0.7
123,442	-				-1.5
123,474	-				-1.6
123,513	+		IAI47_00545	0.10	+1.3
123,514	-		IAI47_00545	0.11	+0.8
123,535	-		IAI47_00545	0.16	-1.9
123,535	-		IAI47_00545	0.16	-1.3
123,535	-		IAI47_00545	0.16	-0.3
123,535	-		IAI47_00545	0.16	-1.0
123,535	-		IAI47_00545	0.16	+1.4
123,552	+		IAI47_00545	0.20	+0.5
123,553	-		IAI47_00545	0.20	+0.6
123,581	-		IAI47_00545	0.28	-0.3
123,623	+		IAI47_00545	0.38	-1.5
123,623	+		IAI47_00545	0.38	-0.2
123,623	+		IAI47_00545	0.38	-0.6
123,623	+		IAI47_00545	0.38	-0.7
123,623	+		IAI47_00545	0.38	+0.3
123,623	+		IAI47_00545	0.38	-1.7
123,623	+		IAI47_00545	0.38	-1.3
123,623	+		IAI47_00545	0.38	+2.2
123,623	+		IAI47_00545	0.38	-0.5
123,623	+		IAI47_00545	0.38	+0.3
123,623	+		IAI47_00545	0.38	+0.1
123,624	-		IAI47_00545	0.38	-2.2
123,624	-		IAI47_00545	0.38	-1.2
123,624	-		IAI47_00545	0.38	+2.6
123,624	-		IAI47_00545	0.38	-3.9
123,624	-		IAI47_00545	0.38	-0.1
123,624	-		IAI47_00545	0.38	-0.2
123,624	-		IAI47_00545	0.38	-0.4
123,624	-		IAI47_00545	0.38	+1.1
123,664	+		IAI47_00545	0.48	+2.9
123,664	+		IAI47_00545	0.48	+1.1
123,664	+		IAI47_00545	0.48	+2.4
123,664	+		IAI47_00545	0.48	-0.1
123,665	-		IAI47_00545	0.49	+0.0
123,680	+		IAI47_00545	0.53	+0.1
123,680	+		IAI47_00545	0.53	+0.4
123,680	+		IAI47_00545	0.53	-0.1
123,680	+		IAI47_00545	0.53	+1.5
123,680	+		IAI47_00545	0.53	+0.3
123,680	+		IAI47_00545	0.53	+1.1
123,680	+		IAI47_00545	0.53	+3.0
123,680	+		IAI47_00545	0.53	+0.4
123,680	+		IAI47_00545	0.53	+0.8
123,680	+		IAI47_00545	0.53	+3.0
123,680	+		IAI47_00545	0.53	-3.0
123,681	-		IAI47_00545	0.53	+0.8
123,681	-		IAI47_00545	0.53	-0.3
123,681	-		IAI47_00545	0.53	-2.3
123,681	-		IAI47_00545	0.53	-0.9
123,681	-		IAI47_00545	0.53	-1.5
123,681	-		IAI47_00545	0.53	-1.5
123,681	-		IAI47_00545	0.53	+1.3
123,681	-		IAI47_00545	0.53	+0.5