Experiment: Aluminum chloride 0.00005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_569 and Pf6N2E2_570 are separated by 127 nucleotides Pf6N2E2_570 and Pf6N2E2_571 are separated by 23 nucleotides Pf6N2E2_571 and Pf6N2E2_572 are separated by 184 nucleotides Pf6N2E2_572 and Pf6N2E2_573 are separated by 67 nucleotides
Pf6N2E2_569 - FIG00793915: hypothetical protein, at 644,069 to 644,557
_569
Pf6N2E2_570 - DNA-3-methyladenine glycosylase II (EC 3.2.2.21), at 644,685 to 645,302
_570
Pf6N2E2_571 - ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 645,326 to 646,369
_571
Pf6N2E2_572 - hypothetical protein, at 646,554 to 647,033
_572
Pf6N2E2_573 - Potassium uptake protein TrkH, at 647,101 to 648,555
_573
Position (kb) 645
646
647 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 644.581 kb on - strand at 644.581 kb on - strand at 644.711 kb on - strand at 644.711 kb on - strand at 644.864 kb on - strand, within Pf6N2E2_570 at 644.864 kb on - strand, within Pf6N2E2_570 at 644.871 kb on + strand, within Pf6N2E2_570 at 645.157 kb on + strand, within Pf6N2E2_570 at 645.158 kb on - strand, within Pf6N2E2_570 at 645.307 kb on + strand at 645.308 kb on - strand at 645.374 kb on + strand at 645.721 kb on - strand, within Pf6N2E2_571 at 645.725 kb on + strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.298 kb on - strand at 646.400 kb on + strand at 646.400 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.421 kb on - strand at 646.421 kb on - strand at 646.517 kb on - strand at 646.565 kb on + strand at 646.565 kb on + strand at 646.566 kb on - strand at 646.656 kb on + strand, within Pf6N2E2_572 at 646.656 kb on + strand, within Pf6N2E2_572 at 646.926 kb on - strand, within Pf6N2E2_572 at 646.973 kb on + strand, within Pf6N2E2_572 at 647.106 kb on - strand at 647.174 kb on - strand at 647.347 kb on - strand, within Pf6N2E2_573 at 647.347 kb on - strand, within Pf6N2E2_573
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.00005 M remove 644,581 - +0.7 644,581 - +1.2 644,711 - +0.5 644,711 - -0.0 644,864 - Pf6N2E2_570 0.29 -0.0 644,864 - Pf6N2E2_570 0.29 -0.3 644,871 + Pf6N2E2_570 0.30 +0.9 645,157 + Pf6N2E2_570 0.76 +1.1 645,158 - Pf6N2E2_570 0.77 +0.3 645,307 + +0.5 645,308 - -1.1 645,374 + -0.3 645,721 - Pf6N2E2_571 0.38 -0.3 645,725 + Pf6N2E2_571 0.38 +0.4 645,726 - Pf6N2E2_571 0.38 -0.4 645,726 - Pf6N2E2_571 0.38 -1.4 645,726 - Pf6N2E2_571 0.38 -0.5 645,726 - Pf6N2E2_571 0.38 +0.1 645,726 - Pf6N2E2_571 0.38 -1.3 646,015 - Pf6N2E2_571 0.66 -1.2 646,015 - Pf6N2E2_571 0.66 -1.5 646,015 - Pf6N2E2_571 0.66 -0.3 646,298 - -1.0 646,400 + -0.5 646,400 + +0.7 646,420 + +1.6 646,420 + +0.3 646,420 + +1.5 646,420 + +0.2 646,421 - +0.8 646,421 - +1.8 646,517 - -1.4 646,565 + -0.2 646,565 + -0.1 646,566 - -1.2 646,656 + Pf6N2E2_572 0.21 +1.3 646,656 + Pf6N2E2_572 0.21 -1.2 646,926 - Pf6N2E2_572 0.78 +0.2 646,973 + Pf6N2E2_572 0.87 -0.0 647,106 - +0.1 647,174 - -2.9 647,347 - Pf6N2E2_573 0.17 -1.9 647,347 - Pf6N2E2_573 0.17 -0.3
Or see this region's nucleotide sequence