Experiment: Aluminum chloride 0.00005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4463 and Pf6N2E2_4464 overlap by 1 nucleotides Pf6N2E2_4464 and Pf6N2E2_4465 are separated by 291 nucleotides Pf6N2E2_4465 and Pf6N2E2_4466 overlap by 25 nucleotides
Pf6N2E2_4463 - 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-), at 5,196,120 to 5,197,586
_4463
Pf6N2E2_4464 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 5,197,586 to 5,198,554
_4464
Pf6N2E2_4465 - ChaC-related protein, at 5,198,846 to 5,199,514
_4465
Pf6N2E2_4466 - Glycerol-3-phosphate transporter, at 5,199,490 to 5,200,839
_4466
Position (kb) 5197
5198
5199 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5197.573 kb on + strand at 5197.579 kb on + strand at 5197.594 kb on - strand at 5197.594 kb on - strand at 5197.670 kb on + strand at 5197.671 kb on - strand at 5197.848 kb on + strand, within Pf6N2E2_4464 at 5197.964 kb on + strand, within Pf6N2E2_4464 at 5198.292 kb on - strand, within Pf6N2E2_4464 at 5198.425 kb on - strand, within Pf6N2E2_4464 at 5198.441 kb on + strand, within Pf6N2E2_4464 at 5198.442 kb on - strand, within Pf6N2E2_4464 at 5198.468 kb on + strand at 5198.468 kb on + strand at 5198.468 kb on + strand at 5198.469 kb on - strand at 5198.548 kb on + strand at 5198.552 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.673 kb on + strand at 5198.673 kb on + strand at 5198.673 kb on + strand at 5198.673 kb on + strand at 5198.674 kb on - strand at 5198.674 kb on - strand at 5198.674 kb on - strand at 5198.674 kb on - strand at 5198.685 kb on + strand at 5198.685 kb on + strand at 5198.686 kb on - strand at 5198.686 kb on - strand at 5198.686 kb on - strand at 5198.689 kb on + strand at 5198.696 kb on + strand at 5198.700 kb on + strand at 5198.723 kb on - strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.728 kb on - strand at 5198.728 kb on - strand at 5198.728 kb on - strand at 5198.729 kb on + strand at 5198.729 kb on + strand at 5198.730 kb on - strand at 5198.759 kb on + strand at 5198.759 kb on + strand at 5198.760 kb on - strand at 5198.869 kb on + strand at 5198.869 kb on + strand at 5198.869 kb on + strand at 5198.870 kb on - strand at 5198.882 kb on + strand at 5198.882 kb on + strand at 5198.990 kb on + strand, within Pf6N2E2_4465 at 5198.990 kb on + strand, within Pf6N2E2_4465 at 5198.991 kb on - strand, within Pf6N2E2_4465 at 5199.056 kb on + strand, within Pf6N2E2_4465 at 5199.056 kb on + strand, within Pf6N2E2_4465 at 5199.072 kb on - strand, within Pf6N2E2_4465 at 5199.072 kb on - strand, within Pf6N2E2_4465 at 5199.297 kb on + strand, within Pf6N2E2_4465 at 5199.297 kb on + strand, within Pf6N2E2_4465 at 5199.321 kb on - strand, within Pf6N2E2_4465 at 5199.321 kb on - strand, within Pf6N2E2_4465 at 5199.321 kb on - strand, within Pf6N2E2_4465 at 5199.398 kb on + strand, within Pf6N2E2_4465 at 5199.398 kb on + strand, within Pf6N2E2_4465 at 5199.398 kb on + strand, within Pf6N2E2_4465 at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.399 kb on - strand at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.476 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.00005 M remove 5,197,573 + +0.5 5,197,579 + -0.2 5,197,594 - +1.2 5,197,594 - +0.9 5,197,670 + -0.2 5,197,671 - +1.0 5,197,848 + Pf6N2E2_4464 0.27 +0.5 5,197,964 + Pf6N2E2_4464 0.39 +0.2 5,198,292 - Pf6N2E2_4464 0.73 -0.5 5,198,425 - Pf6N2E2_4464 0.87 +0.7 5,198,441 + Pf6N2E2_4464 0.88 -0.9 5,198,442 - Pf6N2E2_4464 0.88 -0.8 5,198,468 + -1.3 5,198,468 + +0.0 5,198,468 + +1.5 5,198,469 - +0.4 5,198,548 + -1.4 5,198,552 + -1.0 5,198,671 + +1.0 5,198,671 + -0.4 5,198,671 + -1.4 5,198,671 + -0.1 5,198,671 + +0.8 5,198,671 + -2.0 5,198,671 + -0.1 5,198,671 + +1.0 5,198,671 + +0.3 5,198,671 + -1.1 5,198,671 + +0.7 5,198,671 + -0.6 5,198,671 + +1.0 5,198,671 + -2.0 5,198,672 - +0.4 5,198,672 - -1.3 5,198,672 - +0.9 5,198,672 - +0.5 5,198,672 - +0.2 5,198,672 - -0.1 5,198,672 - -0.5 5,198,672 - -0.5 5,198,672 - -0.1 5,198,672 - +1.5 5,198,672 - -0.9 5,198,672 - +0.4 5,198,672 - +0.6 5,198,672 - +0.5 5,198,673 + +0.3 5,198,673 + +0.5 5,198,673 + +0.3 5,198,673 + +2.3 5,198,674 - -0.1 5,198,674 - +0.4 5,198,674 - +0.4 5,198,674 - +0.1 5,198,685 + +0.1 5,198,685 + -0.1 5,198,686 - -0.0 5,198,686 - -0.1 5,198,686 - +0.1 5,198,689 + -0.5 5,198,696 + -1.4 5,198,700 + +0.0 5,198,723 - -0.1 5,198,727 + +1.0 5,198,727 + -0.1 5,198,727 + +0.4 5,198,727 + -0.0 5,198,727 + -0.1 5,198,727 + -0.0 5,198,727 + -0.1 5,198,728 - +0.7 5,198,728 - +0.4 5,198,728 - -2.3 5,198,729 + +0.3 5,198,729 + +0.6 5,198,730 - -0.7 5,198,759 + +0.2 5,198,759 + -1.1 5,198,760 - +1.0 5,198,869 + -0.3 5,198,869 + -0.0 5,198,869 + -1.0 5,198,870 - +0.7 5,198,882 + +0.3 5,198,882 + -0.0 5,198,990 + Pf6N2E2_4465 0.22 -0.7 5,198,990 + Pf6N2E2_4465 0.22 +0.4 5,198,991 - Pf6N2E2_4465 0.22 +0.8 5,199,056 + Pf6N2E2_4465 0.31 +0.5 5,199,056 + Pf6N2E2_4465 0.31 +1.1 5,199,072 - Pf6N2E2_4465 0.34 -0.7 5,199,072 - Pf6N2E2_4465 0.34 +0.5 5,199,297 + Pf6N2E2_4465 0.67 +0.4 5,199,297 + Pf6N2E2_4465 0.67 +0.7 5,199,321 - Pf6N2E2_4465 0.71 +0.3 5,199,321 - Pf6N2E2_4465 0.71 +1.6 5,199,321 - Pf6N2E2_4465 0.71 -2.4 5,199,398 + Pf6N2E2_4465 0.83 +0.3 5,199,398 + Pf6N2E2_4465 0.83 -0.0 5,199,398 + Pf6N2E2_4465 0.83 -1.1 5,199,399 - Pf6N2E2_4465 0.83 -1.0 5,199,399 - Pf6N2E2_4465 0.83 +0.8 5,199,399 - Pf6N2E2_4465 0.83 -0.7 5,199,399 - -0.7 5,199,399 - Pf6N2E2_4465 0.83 -1.3 5,199,476 - -0.5
Or see this region's nucleotide sequence