Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1499
Experiment: Aluminum chloride 0.00005 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 0.00005 M |
---|---|---|---|---|---|
remove | |||||
1,752,036 | - | -1.2 | |||
1,752,146 | - | -0.3 | |||
1,752,381 | + | Pf6N2E2_1498 | 0.32 | -0.4 | |
1,752,381 | + | Pf6N2E2_1498 | 0.32 | +0.6 | |
1,752,382 | - | Pf6N2E2_1498 | 0.32 | +0.7 | |
1,752,382 | - | Pf6N2E2_1498 | 0.32 | -1.2 | |
1,752,387 | + | Pf6N2E2_1498 | 0.32 | -0.2 | |
1,752,388 | - | Pf6N2E2_1498 | 0.33 | -1.0 | |
1,752,593 | - | Pf6N2E2_1498 | 0.57 | -0.1 | |
1,752,608 | - | Pf6N2E2_1498 | 0.58 | -2.1 | |
1,752,769 | + | Pf6N2E2_1498 | 0.77 | -0.8 | |
1,752,770 | - | Pf6N2E2_1498 | 0.77 | +0.9 | |
1,752,770 | - | Pf6N2E2_1498 | 0.77 | +0.1 | |
1,752,970 | + | -0.2 | |||
1,752,970 | + | +0.7 | |||
1,752,971 | - | +0.1 | |||
1,753,296 | + | Pf6N2E2_1499 | 0.33 | -0.7 | |
1,753,379 | + | Pf6N2E2_1499 | 0.43 | -1.0 | |
1,753,380 | - | Pf6N2E2_1499 | 0.43 | -0.8 | |
1,753,453 | + | Pf6N2E2_1499 | 0.52 | -0.9 | |
1,753,479 | - | Pf6N2E2_1499 | 0.55 | +0.1 | |
1,753,862 | - | +0.3 | |||
1,753,947 | - | +3.8 | |||
1,753,957 | + | -0.9 | |||
1,754,321 | + | Pf6N2E2_1500 | 0.26 | +0.7 | |
1,754,611 | + | Pf6N2E2_1500 | 0.60 | -0.1 | |
1,754,612 | - | Pf6N2E2_1500 | 0.60 | -0.8 | |
1,754,669 | - | Pf6N2E2_1500 | 0.67 | +0.2 | |
1,754,725 | + | Pf6N2E2_1500 | 0.73 | +1.3 |
Or see this region's nucleotide sequence