Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11150

Experiment: NAG carbon and (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG carbon and (N)
2,462,393	+		PFLU_RS11145	0.38	-1.1
2,462,422	+		PFLU_RS11145	0.40	-2.5
2,462,423	-		PFLU_RS11145	0.40	-2.0
2,462,423	-		PFLU_RS11145	0.40	-0.6
2,462,423	-		PFLU_RS11145	0.40	+1.6
2,462,423	-		PFLU_RS11145	0.40	-0.2
2,462,654	+		PFLU_RS11145	0.55	+0.9
2,462,678	+		PFLU_RS11145	0.56	+2.5
2,462,711	+		PFLU_RS11145	0.58	+2.0
2,462,711	+		PFLU_RS11145	0.58	+0.2
2,462,711	+		PFLU_RS11145	0.58	-1.3
2,462,711	+		PFLU_RS11145	0.58	-0.3
2,462,711	+		PFLU_RS11145	0.58	+0.1
2,462,711	+		PFLU_RS11145	0.58	+0.4
2,462,711	+		PFLU_RS11145	0.58	-1.0
2,462,711	+		PFLU_RS11145	0.58	+0.6
2,462,712	-		PFLU_RS11145	0.58	+3.6
2,462,712	-		PFLU_RS11145	0.58	-2.8
2,462,712	-		PFLU_RS11145	0.58	-0.5
2,462,712	-		PFLU_RS11145	0.58	+1.5
2,462,712	-		PFLU_RS11145	0.58	-2.1
2,462,712	-		PFLU_RS11145	0.58	+0.3
2,462,717	+		PFLU_RS11145	0.59	-0.4
2,462,717	+		PFLU_RS11145	0.59	+0.0
2,462,718	-		PFLU_RS11145	0.59	+1.5
2,462,718	-		PFLU_RS11145	0.59	+1.6
2,462,718	-		PFLU_RS11145	0.59	-0.3
2,462,718	-		PFLU_RS11145	0.59	+1.2
2,462,807	+		PFLU_RS11145	0.64	-2.0
2,462,807	+		PFLU_RS11145	0.64	+0.9
2,462,808	-		PFLU_RS11145	0.64	+0.7
2,462,808	-		PFLU_RS11145	0.64	-0.6
2,462,808	-		PFLU_RS11145	0.64	-3.0
2,462,808	-		PFLU_RS11145	0.64	-0.7
2,462,808	-		PFLU_RS11145	0.64	-3.0
2,462,808	-		PFLU_RS11145	0.64	-2.1
2,462,808	-		PFLU_RS11145	0.64	+0.2
2,463,033	-		PFLU_RS11145	0.79	+1.2
2,463,044	+		PFLU_RS11145	0.79	-2.5
2,463,044	+		PFLU_RS11145	0.79	-1.3
2,463,044	+		PFLU_RS11145	0.79	-2.3
2,463,044	+		PFLU_RS11145	0.79	-0.8
2,463,044	+		PFLU_RS11145	0.79	-0.2
2,463,044	+		PFLU_RS11145	0.79	-1.6
2,463,044	+		PFLU_RS11145	0.79	-0.5
2,463,045	-		PFLU_RS11145	0.79	+3.5
2,463,045	-		PFLU_RS11145	0.79	+0.3
2,463,045	-		PFLU_RS11145	0.79	+0.1
2,463,045	-		PFLU_RS11145	0.79	+1.5
2,463,074	+		PFLU_RS11145	0.81	+1.5
2,463,074	+		PFLU_RS11145	0.81	-0.6
2,463,074	+		PFLU_RS11145	0.81	+0.5
2,463,074	+		PFLU_RS11145	0.81	+1.1
2,463,074	+		PFLU_RS11145	0.81	-3.3
2,463,074	+		PFLU_RS11145	0.81	+0.5
2,463,074	+		PFLU_RS11145	0.81	-1.0
2,463,074	+		PFLU_RS11145	0.81	-0.1
2,463,074	+		PFLU_RS11145	0.81	-1.7
2,463,074	+		PFLU_RS11145	0.81	-0.8
2,463,074	+		PFLU_RS11145	0.81	-0.5
2,463,075	-		PFLU_RS11145	0.81	+1.3
2,463,075	-		PFLU_RS11145	0.81	+0.8
2,463,075	-		PFLU_RS11145	0.81	-0.4
2,463,078	-		PFLU_RS11145	0.81	-0.8
2,463,140	-		PFLU_RS11145	0.85	-1.3
2,463,140	-		PFLU_RS11145	0.85	+2.7
2,463,267	+				+0.8
2,463,343	-				+0.5
2,463,343	-				-2.0
2,463,469	+				-1.5
2,463,469	+				-0.7
2,463,469	+				-1.3
2,463,469	+				+1.1
2,463,511	+		PFLU_RS11150	0.11	-0.8
2,463,613	+		PFLU_RS11150	0.19	-0.1
2,463,727	+		PFLU_RS11150	0.28	-1.5
2,463,727	+		PFLU_RS11150	0.28	-0.1
2,463,727	+		PFLU_RS11150	0.28	+0.6
2,463,727	+		PFLU_RS11150	0.28	+1.5
2,463,727	+		PFLU_RS11150	0.28	+0.3
2,463,727	+		PFLU_RS11150	0.28	+1.1
2,463,727	+		PFLU_RS11150	0.28	+0.5
2,463,727	+		PFLU_RS11150	0.28	-1.4
2,463,728	-		PFLU_RS11150	0.28	-0.6
2,463,728	-		PFLU_RS11150	0.28	-0.3
2,463,728	-		PFLU_RS11150	0.28	-0.1
2,463,728	-		PFLU_RS11150	0.28	-2.0
2,463,728	-		PFLU_RS11150	0.28	-0.6
2,463,728	-		PFLU_RS11150	0.28	+3.5
2,463,728	-		PFLU_RS11150	0.28	+2.8
2,463,728	-		PFLU_RS11150	0.28	-0.8
2,463,728	-		PFLU_RS11150	0.28	+2.8
2,463,826	+		PFLU_RS11150	0.36	-0.2
2,463,826	+		PFLU_RS11150	0.36	-1.7
2,463,827	-		PFLU_RS11150	0.36	-0.1
2,463,827	-		PFLU_RS11150	0.36	-1.1
2,463,827	-		PFLU_RS11150	0.36	+0.6
2,463,827	-		PFLU_RS11150	0.36	-1.2
2,464,177	-		PFLU_RS11150	0.64	+1.5
2,464,225	+		PFLU_RS11150	0.68	+0.7
2,464,225	+		PFLU_RS11150	0.68	+0.5
2,464,225	+		PFLU_RS11150	0.68	-1.0
2,464,226	-		PFLU_RS11150	0.68	+0.2
2,464,226	-		PFLU_RS11150	0.68	+0.8
2,464,394	+		PFLU_RS11150	0.81	-2.8
2,464,703	+				+3.0
2,464,704	-				+2.3
2,464,706	+				-0.1
2,464,771	-				-0.5
2,464,776	+				-1.1
2,464,777	-				-0.3
2,464,777	-				+1.2
2,464,830	-				-1.1
2,464,871	+				-0.5
2,464,871	+				-1.8
2,464,871	+				-0.0
2,464,871	+				+0.2
2,464,990	+				-0.3
2,464,990	+				-0.5
2,464,990	+				+0.8
2,464,990	+				+1.0
2,464,990	+				+1.1
2,464,990	+				+0.5
2,464,991	-				+0.1
2,464,991	-				-3.0
2,464,991	-				+0.2
2,464,991	-				-1.5
2,464,991	-				-2.6
2,464,991	-				-0.3
2,464,991	-				-2.0
2,465,001	+				+0.5
2,465,001	+				+1.6
2,465,001	+				-2.4
2,465,001	+				-1.1
2,465,001	+				+0.7
2,465,001	+				+1.1
2,465,001	+				+0.5
2,465,001	+				+0.5
2,465,002	-				+0.6
2,465,002	-				-0.5
2,465,002	-				-0.8
2,465,002	-				-2.8
2,465,002	-				+1.4
2,465,002	-				+0.6
2,465,002	-				+1.0
2,465,002	-				-1.1
2,465,088	-		PFLU_RS11155	0.15	-2.5
2,465,113	+		PFLU_RS11155	0.17	+0.5
2,465,229	+		PFLU_RS11155	0.26	+1.5
2,465,229	+		PFLU_RS11155	0.26	+0.1
2,465,229	+		PFLU_RS11155	0.26	+1.2
2,465,229	+		PFLU_RS11155	0.26	-0.4
2,465,229	+		PFLU_RS11155	0.26	+2.6
2,465,229	+		PFLU_RS11155	0.26	+1.6
2,465,230	-		PFLU_RS11155	0.26	+3.1
2,465,230	-		PFLU_RS11155	0.26	-1.3
2,465,230	-		PFLU_RS11155	0.26	-2.0
2,465,230	-		PFLU_RS11155	0.26	-0.1
2,465,230	-		PFLU_RS11155	0.26	+1.5
2,465,230	-		PFLU_RS11155	0.26	-0.1
2,465,230	-		PFLU_RS11155	0.26	+0.7
2,465,230	-		PFLU_RS11155	0.26	-0.5
2,465,230	-		PFLU_RS11155	0.26	+3.3
2,465,274	+		PFLU_RS11155	0.29	+0.4
2,465,275	-		PFLU_RS11155	0.29	+1.7
2,465,505	+		PFLU_RS11155	0.46	-3.2
2,465,506	-		PFLU_RS11155	0.46	-0.5